RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W LAM6Q08001 693 aa5.3□□□□□ -1.56
MCD1YDL003W SEC2P17065 759 aa5.29□□□□□ -1.56
MCD1YDL003W TY1A-DR4O74302 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-HP0C2I4 478 aaKnown RBP5.28□□□□□ -1.56
MCD1YDL003W TY1A-AP0CX57 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-PR1P0CX58 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-ORP0CX59 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-PR2P0CX60 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-DR5P0CX65 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-ER2P0CX66 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-GR3P0CX67 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-LR1P0CX68 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-MR2P0CX69 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-JR2P47099 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-DR1Q03856 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-ML1Q04706 440 aaKnown RBP5.28□□□□□ -1.56
MCD1YDL003W TY1A-BRQ12217 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-NL2Q12470 440 aa5.28□□□□□ -1.56
MCD1YDL003W TY1A-GR2Q12485 440 aa5.28□□□□□ -1.56
MCD1YDL003W CDC4P07834 779 aa5.28□□□□□ -1.56
MCD1YDL003W RGR1P19263 1082 aa5.27□□□□□ -1.57
MCD1YDL003W BDP1P46678 594 aa5.27□□□□□ -1.57
MCD1YDL003W HED1Q03937 162 aa5.24□□□□□ -1.57
MCD1YDL003W KEX2P13134 814 aa5.23□□□□□ -1.57
MCD1YDL003W MET22P32179 357 aa5.21□□□□□ -1.58
MCD1YDL003W HST3P53687 447 aa5.2□□□□□ -1.58
MCD1YDL003W ERF2Q06551 359 aa5.2□□□□□ -1.58
MCD1YDL003W ASH1P34233 588 aa5.19□□□□□ -1.58
MCD1YDL003W ENV9Q08651 330 aa5.19□□□□□ -1.58
MCD1YDL003W PBS2P08018 668 aa5.17□□□□□ -1.58
MCD1YDL003W CKB1P43639 278 aa5.17□□□□□ -1.58
MCD1YDL003W YDR444WQ04093 687 aa5.17□□□□□ -1.58
MCD1YDL003W PSE1P32337 1089 aaKnown RBP5.16□□□□□ -1.58
MCD1YDL003W CLB5P30283 435 aa5.15□□□□□ -1.58
MCD1YDL003W PAC1P39946 494 aaKnown RBP5.15□□□□□ -1.58
MCD1YDL003W PUS5Q06244 254 aa5.15□□□□□ -1.58
MCD1YDL003W AFT1P22149 690 aa5.13□□□□□ -1.59
MCD1YDL003W TUB4P53378 473 aa5.13□□□□□ -1.59
MCD1YDL003W MET32Q12041 191 aa5.13□□□□□ -1.59
MCD1YDL003W MOD5P07884 428 aa5.11□□□□□ -1.59
MCD1YDL003W YNL115CP53925 644 aa5.11□□□□□ -1.59
MCD1YDL003W RTF1P53064 558 aa5.11□□□□□ -1.59
MCD1YDL003W KXD1P53158 218 aa5.11□□□□□ -1.59
MCD1YDL003W LCB5Q06147 687 aaKnown RBP5.11□□□□□ -1.59
MCD1YDL003W MAM3Q12296 706 aa5.11□□□□□ -1.59
MCD1YDL003W YJR115WP47152 169 aa5.09□□□□□ -1.6
MCD1YDL003W AGE1Q04412 482 aa5.09□□□□□ -1.6
MCD1YDL003W RRD1P40454 393 aaKnown RBP5.08□□□□□ -1.6
MCD1YDL003W TEA1P47988 759 aa5.08□□□□□ -1.6
MCD1YDL003W SYH1Q02875 849 aaKnown RBP5.06□□□□□ -1.6
MCD1YDL003W UGA3P26370 528 aa5.04□□□□□ -1.6
MCD1YDL003W IES2P40154 320 aa5.04□□□□□ -1.6
MCD1YDL003W SRF1Q12516 437 aa5.04□□□□□ -1.6
MCD1YDL003W SIT4P20604 311 aa5.03□□□□□ -1.6
MCD1YDL003W HXT10P43581 546 aa5.03□□□□□ -1.6
MCD1YDL003W YLR346CQ06139 101 aa5.03□□□□□ -1.6
MCD1YDL003W SLY41P22215 453 aa5.03□□□□□ -1.6
MCD1YDL003W KIP2P28743 706 aa5.03□□□□□ -1.6
MCD1YDL003W SPB4P25808 606 aaPredicted RBP5.02□□□□□ -1.61
MCD1YDL003W YMR196WQ04336 1088 aa5.02□□□□□ -1.61
MCD1YDL003W YDL176WQ12027 708 aa5.02□□□□□ -1.61
MCD1YDL003W TPD3P31383 635 aa5.01□□□□□ -1.61
MCD1YDL003W MSB3P48566 633 aaPredicted RBP5.01□□□□□ -1.61
MCD1YDL003W NIS1P53939 407 aa5.01□□□□□ -1.61
MCD1YDL003W TBF1Q02457 562 aa5□□□□□ -1.61
MCD1YDL003W DSF2P38213 736 aa5□□□□□ -1.61
MCD1YDL003W PDC1P06169 563 aaKnown RBP4.99□□□□□ -1.61
MCD1YDL003W CAF120P53836 1060 aa4.99□□□□□ -1.61
MCD1YDL003W ALR1Q08269 859 aa4.99□□□□□ -1.61
MCD1YDL003W IXR1P33417 597 aa4.98□□□□□ -1.61
MCD1YDL003W PUS6P53294 404 aa4.98□□□□□ -1.61
MCD1YDL003W FPK1P53739 893 aa4.97□□□□□ -1.61
MCD1YDL003W PTK2P47116 818 aaKnown RBP4.97□□□□□ -1.61
MCD1YDL003W NUP42P49686 430 aaKnown RBP4.97□□□□□ -1.61
MCD1YDL003W OPT2Q06593 877 aa4.96□□□□□ -1.62
MCD1YDL003W DIT2P21595 489 aa4.95□□□□□ -1.62
MCD1YDL003W RPA14P50106 137 aa4.95□□□□□ -1.62
MCD1YDL003W TYW1Q08960 810 aaKnown RBP4.95□□□□□ -1.62
MCD1YDL003W YDL206WQ12424 762 aa4.94□□□□□ -1.62
MCD1YDL003W ACO2P39533 789 aa4.94□□□□□ -1.62
MCD1YDL003W MTC5Q03897 1148 aa4.94□□□□□ -1.62
MCD1YDL003W YPR097WQ06839 1073 aa4.94□□□□□ -1.62
MCD1YDL003W RTT106P40161 455 aa4.92□□□□□ -1.62
MCD1YDL003W NUP85P46673 744 aa4.92□□□□□ -1.62
MCD1YDL003W SCJ1P25303 377 aa4.92□□□□□ -1.62
MCD1YDL003W TRK2P28584 889 aa4.92□□□□□ -1.62
MCD1YDL003W SCW11P53189 542 aa4.92□□□□□ -1.62
MCD1YDL003W YGR035CP53222 116 aa4.92□□□□□ -1.62
MCD1YDL003W MIP1P15801 1254 aa4.91□□□□□ -1.62
MCD1YDL003W TRM1P15565 570 aaKnown RBP4.9□□□□□ -1.62
MCD1YDL003W GLY1P37303 387 aaKnown RBP4.9□□□□□ -1.62
MCD1YDL003W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.9□□□□□ -1.62not detected
MCD1YDL003W MMP1Q12372 583 aa4.9□□□□□ -1.62
MCD1YDL003W MRT4P33201 236 aaKnown RBP4.89□□□□□ -1.63
MCD1YDL003W ATF2P53296 535 aa4.89□□□□□ -1.63
MCD1YDL003W SAS10Q12136 610 aaPredicted RBP4.89□□□□□ -1.63
MCD1YDL003W ARG82P07250 355 aa4.88□□□□□ -1.63
MCD1YDL003W LSC2P53312 427 aa4.88□□□□□ -1.63
MCD1YDL003W HST2P53686 357 aa4.88□□□□□ -1.63
MCD1YDL003W GLN1P32288 370 aaKnown RBP4.87□□□□□ -1.63
Retrieved 100 of 5,963 RNA–protein pairs in 33.9 ms