RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	ENV9	Q08651	330 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-BR	Q12217	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-NL2	Q12470	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	TY1A-GR2	Q12485	440 aa		4.83	□□□□□ -1.64
LRE1	YCL051W	SEC2	P17065	759 aa		4.82	□□□□□ -1.64
LRE1	YCL051W	TUM1	Q08686	304 aa	Known RBP	4.82	□□□□□ -1.64
LRE1	YCL051W	SPT16	P32558	1035 aa	Known RBP	4.81	□□□□□ -1.64
LRE1	YCL051W	FRK1	Q03002	865 aa	Predicted RBP	4.81	□□□□□ -1.64
LRE1	YCL051W	GCD11	P32481	527 aa	Known RBP	4.8	□□□□□ -1.64
LRE1	YCL051W	NPL4	P33755	580 aa		4.8	□□□□□ -1.64
LRE1	YCL051W	KIC1	P38692	1080 aa		4.79	□□□□□ -1.64
LRE1	YCL051W	BDP1	P46678	594 aa		4.78	□□□□□ -1.64
LRE1	YCL051W	YDR444W	Q04093	687 aa		4.77	□□□□□ -1.65
LRE1	YCL051W	HED1	Q03937	162 aa		4.76	□□□□□ -1.65
LRE1	YCL051W	ORC6	P38826	435 aa		4.76	□□□□□ -1.65
LRE1	YCL051W	RRN7	P40992	514 aa		4.76	□□□□□ -1.65
LRE1	YCL051W	YDL176W	Q12027	708 aa		4.76	□□□□□ -1.65
LRE1	YCL051W	LCB5	Q06147	687 aa	Known RBP	4.73	□□□□□ -1.65
LRE1	YCL051W	IFH1	P39520	1085 aa		4.72	□□□□□ -1.65
LRE1	YCL051W	MVP1	P40959	511 aa	Known RBP	4.71	□□□□□ -1.66
LRE1	YCL051W	PAT1	P25644	796 aa	Known RBP	4.7	□□□□□ -1.66
LRE1	YCL051W	ASH1	P34233	588 aa		4.7	□□□□□ -1.66
LRE1	YCL051W	MET32	Q12041	191 aa		4.7	□□□□□ -1.66
LRE1	YCL051W	REF2	P42073	533 aa	Predicted RBP	4.69	□□□□□ -1.66
LRE1	YCL051W	AFT1	P22149	690 aa		4.68	□□□□□ -1.66
LRE1	YCL051W	MOD5	P07884	428 aa		4.67	□□□□□ -1.66
LRE1	YCL051W	YPR109W	Q06104	294 aa		4.67	□□□□□ -1.66
LRE1	YCL051W	RRD1	P40454	393 aa	Known RBP	4.66	□□□□□ -1.66
LRE1	YCL051W	ERF2	Q06551	359 aa		4.66	□□□□□ -1.66
LRE1	YCL051W	RGR1	P19263	1082 aa		4.65	□□□□□ -1.66
LRE1	YCL051W	HST3	P53687	447 aa		4.65	□□□□□ -1.67
LRE1	YCL051W	KEX2	P13134	814 aa		4.64	□□□□□ -1.67
LRE1	YCL051W	PAC1	P39946	494 aa	Known RBP	4.64	□□□□□ -1.67
LRE1	YCL051W	YPR148C	Q06523	435 aa		4.64	□□□□□ -1.67
LRE1	YCL051W	COX6	P00427	148 aa		4.63	□□□□□ -1.67
LRE1	YCL051W	YJR115W	P47152	169 aa		4.62	□□□□□ -1.67
LRE1	YCL051W	MTC5	Q03897	1148 aa		4.62	□□□□□ -1.67
LRE1	YCL051W	PUS5	Q06244	254 aa		4.62	□□□□□ -1.67
LRE1	YCL051W	MAK21	Q12176	1025 aa	Known RBP	4.61	□□□□□ -1.67
LRE1	YCL051W	AGE1	Q04412	482 aa		4.6	□□□□□ -1.67
LRE1	YCL051W	ACO2	P39533	789 aa		4.58	□□□□□ -1.68
LRE1	YCL051W	TUB4	P53378	473 aa		4.58	□□□□□ -1.68
LRE1	YCL051W	CAF120	P53836	1060 aa		4.57	□□□□□ -1.68
LRE1	YCL051W	MSB3	P48566	633 aa	Predicted RBP	4.55	□□□□□ -1.68
LRE1	YCL051W	TRK2	P28584	889 aa		4.53	□□□□□ -1.68
LRE1	YCL051W	VPS70	P47161	811 aa		4.53	□□□□□ -1.69
LRE1	YCL051W	OPT2	Q06593	877 aa		4.53	□□□□□ -1.69
LRE1	YCL051W	TPD3	P31383	635 aa		4.51	□□□□□ -1.69
LRE1	YCL051W	RTF1	P53064	558 aa		4.51	□□□□□ -1.69
LRE1	YCL051W	YGR035C	P53222	116 aa		4.5	□□□□□ -1.69
LRE1	YCL051W	PSE1	P32337	1089 aa	Known RBP	4.49	□□□□□ -1.69
LRE1	YCL051W	PTK2	P47116	818 aa	Known RBP	4.49	□□□□□ -1.69
LRE1	YCL051W	YNL115C	P53925	644 aa		4.49	□□□□□ -1.69
LRE1	YCL051W	SYH1	Q02875	849 aa	Known RBP	4.49	□□□□□ -1.69
LRE1	YCL051W	UGA3	P26370	528 aa		4.48	□□□□□ -1.69
LRE1	YCL051W	CLB5	P30283	435 aa		4.48	□□□□□ -1.69
LRE1	YCL051W	KXD1	P53158	218 aa		4.48	□□□□□ -1.69
LRE1	YCL051W	YLR346C	Q06139	101 aa		4.48	□□□□□ -1.69
LRE1	YCL051W	GLY1	P37303	387 aa	Known RBP	4.47	□□□□□ -1.69
LRE1	YCL051W	YIR007W	P40566	764 aa		4.47	□□□□□ -1.69
LRE1	YCL051W	HXT10	P43581	546 aa		4.47	□□□□□ -1.69
LRE1	YCL051W	HPF1	Q05164	967 aa		4.47	□□□□□ -1.69
LRE1	YCL051W	PDC1	P06169	563 aa	Known RBP	4.45	□□□□□ -1.7
LRE1	YCL051W	SIT4	P20604	311 aa		4.45	□□□□□ -1.7
LRE1	YCL051W	SRF1	Q12516	437 aa		4.45	□□□□□ -1.7
LRE1	YCL051W	NUP85	P46673	744 aa		4.44	□□□□□ -1.7
LRE1	YCL051W	TY1A-BL	Q12266	440 aa		4.44	□□□□□ -1.7
LRE1	YCL051W	SCW11	P53189	542 aa		4.43	□□□□□ -1.7
LRE1	YCL051W	MRT4	P33201	236 aa	Known RBP	4.42	□□□□□ -1.7
LRE1	YCL051W	TYW1	Q08960	810 aa	Known RBP	4.42	□□□□□ -1.7
LRE1	YCL051W	MIP1	P15801	1254 aa		4.41	□□□□□ -1.7
LRE1	YCL051W	ICP55	P40051	511 aa		4.4	□□□□□ -1.71
LRE1	YCL051W	PBS2	P08018	668 aa		4.39	□□□□□ -1.71
LRE1	YCL051W	KIP2	P28743	706 aa		4.39	□□□□□ -1.71
LRE1	YCL051W	RTT106	P40161	455 aa		4.38	□□□□□ -1.71
LRE1	YCL051W	NIS1	P53939	407 aa		4.38	□□□□□ -1.71
LRE1	YCL051W	YPR204W	Q08995	1032 aa		4.38	□□□□□ -1.71
LRE1	YCL051W	IXR1	P33417	597 aa		4.37	□□□□□ -1.71
LRE1	YCL051W	LSB3	P43603	459 aa	Known RBP	4.37	□□□□□ -1.71
LRE1	YCL051W	TEA1	P47988	759 aa		4.36	□□□□□ -1.71
LRE1	YCL051W	RPA14	P50106	137 aa		4.36	□□□□□ -1.71
LRE1	YCL051W	YPR097W	Q06839	1073 aa		4.36	□□□□□ -1.71
LRE1	YCL051W	ALR1	Q08269	859 aa		4.36	□□□□□ -1.71
LRE1	YCL051W	PUS1	Q12211	544 aa	Known RBP	4.36	□□□□□ -1.71
LRE1	YCL051W	SLY41	P22215	453 aa		4.35	□□□□□ -1.71
LRE1	YCL051W	YDL206W	Q12424	762 aa		4.35	□□□□□ -1.71
LRE1	YCL051W	CKB1	P43639	278 aa		4.34	□□□□□ -1.71
LRE1	YCL051W	LSC2	P53312	427 aa		4.34	□□□□□ -1.71
LRE1	YCL051W	UBP2	Q01476	1272 aa		4.34	□□□□□ -1.71
LRE1	YCL051W	AAD14	P42884	376 aa		4.33	□□□□□ -1.72
LRE1	YCL051W	MAM3	Q12296	706 aa		4.33	□□□□□ -1.72
LRE1	YCL051W	DPH6	Q12429	685 aa		4.33	□□□□□ -1.72
LRE1	YCL051W	ROG3	P43602	733 aa		4.32	□□□□□ -1.72
LRE1	YCL051W	PUS6	P53294	404 aa		4.32	□□□□□ -1.72
LRE1	YCL051W	ARG82	P07250	355 aa		4.32	□□□□□ -1.72
LRE1	YCL051W	YJR098C	P47139	656 aa		4.32	□□□□□ -1.72
LRE1	YCL051W	FPK1	P53739	893 aa		4.32	□□□□□ -1.72
LRE1	YCL051W	TY1A-MR1	Q04215	440 aa		4.31	□□□□□ -1.72
LRE1	YCL051W	PHM7	Q12252	991 aa		4.31	□□□□□ -1.72
LRE1	YCL051W	CCP1	P00431	361 aa		4.3	□□□□□ -1.72

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms