RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	MTC1	P47018	478 aa	Known RBP	9.78	□□□□□ -0.84
LRE1	YCL051W	FAP1	P53971	965 aa		9.57	□□□□□ -0.88
LRE1	YCL051W	PRY3	P47033	881 aa		9.04	□□□□□ -0.96
LRE1	YCL051W	AAD16	Q02895	342 aa		8.68	□□□□□ -1.02
LRE1	YCL051W	PRI1	P10363	409 aa		8.66	□□□□□ -1.02
LRE1	YCL051W	YCK3	P39962	524 aa		8.57	□□□□□ -1.04
LRE1	YCL051W	HAA1	Q12753	694 aa	Known RBP	8.45	□□□□□ -1.06
LRE1	YCL051W	DRS1	P32892	752 aa	Known RBP	8.4	□□□□□ -1.07
LRE1	YCL051W	ISW2	Q08773	1120 aa		8.25	□□□□□ -1.09
LRE1	YCL051W	RPG1	P38249	964 aa	Known RBP	8.19	□□□□□ -1.1
LRE1	YCL051W	TSR3	Q12094	313 aa	Known RBP	8.12	□□□□□ -1.11
LRE1	YCL051W	MRPL32	P25348	183 aa		7.8	□□□□□ -1.16
LRE1	YCL051W	YGL015C	P33199	130 aa		7.69	□□□□□ -1.18
LRE1	YCL051W	DIP2	Q12220	943 aa	Predicted RBP	7.64	□□□□□ -1.19
LRE1	YCL051W	RSE1	Q04693	1361 aa	Known RBP	7.57	□□□□□ -1.2
LRE1	YCL051W	REB1	P21538	810 aa		7.39	□□□□□ -1.23
LRE1	YCL051W	BUD31	P25337	157 aa	Predicted RBP	7.38	□□□□□ -1.23
LRE1	YCL051W	RPL17A	P05740	184 aa	Known RBP	7.37	□□□□□ -1.23
LRE1	YCL051W	RPL17B	P46990	184 aa	Known RBP	7.37	□□□□□ -1.23
LRE1	YCL051W	CDC27	P38042	758 aa		7.31	□□□□□ -1.24
LRE1	YCL051W	UBP10	P53874	792 aa	Predicted RBP	7.18	□□□□□ -1.26
LRE1	YCL051W	AVT3	P36062	692 aa		7.18	□□□□□ -1.26
LRE1	YCL051W	MAP2	P38174	421 aa	Known RBP	7.15	□□□□□ -1.26
LRE1	YCL051W	YKR023W	P36119	530 aa	Known RBP	7.13	□□□□□ -1.27
LRE1	YCL051W	SPT21	P35209	758 aa		7.04	□□□□□ -1.28
LRE1	YCL051W	TFC8	Q12308	588 aa		6.97	□□□□□ -1.29
LRE1	YCL051W	HO	P09932	586 aa		6.96	□□□□□ -1.3
LRE1	YCL051W	DCD1	P06773	312 aa		6.95	□□□□□ -1.3
LRE1	YCL051W	SIS1	P25294	352 aa	Known RBP	6.92	□□□□□ -1.3
LRE1	YCL051W	TGL3	P40308	642 aa		6.89	□□□□□ -1.31
LRE1	YCL051W	TIF4632	P39936	914 aa	Known RBP	6.88	□□□□□ -1.31
LRE1	YCL051W	SCY1	P53009	804 aa		6.87	□□□□□ -1.31
LRE1	YCL051W	UBP9	P39967	754 aa		6.87	□□□□□ -1.31
LRE1	YCL051W	SLX5	P32828	619 aa	Known RBP	6.83	□□□□□ -1.32
LRE1	YCL051W	BCH2	P36122	765 aa		6.72	□□□□□ -1.33
LRE1	YCL051W	RIM101	P33400	625 aa		6.63	□□□□□ -1.35
LRE1	YCL051W	BFR2	Q06631	534 aa	Known RBP	6.63	□□□□□ -1.35
LRE1	YCL051W	MST1	P07236	462 aa		6.54	□□□□□ -1.36
LRE1	YCL051W	YBL029C-A	Q3E756	94 aa		6.51	□□□□□ -1.37
LRE1	YCL051W	BDF1	P35817	686 aa		6.49	□□□□□ -1.37
LRE1	YCL051W	EPS1	P40557	701 aa		6.49	□□□□□ -1.37
LRE1	YCL051W	YOR238W	Q08634	303 aa		6.44	□□□□□ -1.38
LRE1	YCL051W	VNX1	P42839	908 aa		6.42	□□□□□ -1.38
LRE1	YCL051W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	6.39	□□□□□ -1.39	not detected
LRE1	YCL051W	OXP1	P28273	1286 aa		6.39	□□□□□ -1.39
LRE1	YCL051W	SPP1	Q03012	353 aa		6.34	□□□□□ -1.39
LRE1	YCL051W	AIR2	Q12476	344 aa	Known RBP	6.31	□□□□□ -1.4
LRE1	YCL051W	YAP5	P40574	245 aa		6.3	□□□□□ -1.4
LRE1	YCL051W	WSC3	Q12215	556 aa		6.29	□□□□□ -1.4
LRE1	YCL051W	PTP3	P40048	928 aa		6.28	□□□□□ -1.4
LRE1	YCL051W	FKH1	P40466	484 aa		6.27	□□□□□ -1.41
LRE1	YCL051W	YIL055C	P40523	627 aa	Known RBP	6.25	□□□□□ -1.41
LRE1	YCL051W	YJL171C	P46992	396 aa		6.25	□□□□□ -1.41
LRE1	YCL051W	TIF11	P38912	153 aa	Known RBP	6.24	□□□□□ -1.41
LRE1	YCL051W	BBC1	P47068	1157 aa		6.23	□□□□□ -1.41
LRE1	YCL051W	RSM7	P47150	247 aa		6.19	□□□□□ -1.42
LRE1	YCL051W	AI2	P03876	854 aa		6.18	□□□□□ -1.42
LRE1	YCL051W	GTT3	P39996	337 aa		6.16	□□□□□ -1.42
LRE1	YCL051W	LDB19	Q12502	818 aa		6.15	□□□□□ -1.43
LRE1	YCL051W	IOC2	Q12072	812 aa		6.13	□□□□□ -1.43
LRE1	YCL051W	ULI1	P43604	169 aa		6.12	□□□□□ -1.43
LRE1	YCL051W	BMT6	Q12291	365 aa		6.12	□□□□□ -1.43
LRE1	YCL051W	YAH1	Q12184	172 aa	Known RBP	6.06	□□□□□ -1.44
LRE1	YCL051W	PIB1	Q06651	286 aa		6.04	□□□□□ -1.44
LRE1	YCL051W	MSB4	Q12317	492 aa		6.01	□□□□□ -1.45
LRE1	YCL051W	EAP1	P36041	632 aa	Known RBP	5.99	□□□□□ -1.45
LRE1	YCL051W	RTG1	P32607	177 aa		5.98	□□□□□ -1.45
LRE1	YCL051W	PSD2	P53037	1138 aa	Known RBP	5.97	□□□□□ -1.45
LRE1	YCL051W	YLR271W	Q06152	274 aa		5.97	□□□□□ -1.45
LRE1	YCL051W	TRP5	P00931	707 aa	Known RBP	5.95	□□□□□ -1.46
LRE1	YCL051W	NCR1	Q12200	1170 aa		5.95	□□□□□ -1.46
LRE1	YCL051W	YOL036W	Q08206	761 aa		5.94	□□□□□ -1.46
LRE1	YCL051W	MRM1	P25270	412 aa		5.93	□□□□□ -1.46
LRE1	YCL051W	SET4	P42948	560 aa		5.93	□□□□□ -1.46
LRE1	YCL051W	YNL035C	P53962	389 aa	Known RBP	5.91	□□□□□ -1.46
LRE1	YCL051W	SEC61	P32915	480 aa		5.9	□□□□□ -1.46
LRE1	YCL051W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.85	□□□□□ -1.47	not detected
LRE1	YCL051W	DBP1	P24784	617 aa	Known RBP	5.83	□□□□□ -1.48
LRE1	YCL051W	VPS29	P38759	282 aa		5.83	□□□□□ -1.48
LRE1	YCL051W	SAM3	Q08986	587 aa		5.83	□□□□□ -1.48
LRE1	YCL051W	VMA1	P17255	1071 aa	Known RBP	5.82	□□□□□ -1.48
LRE1	YCL051W	BCK2	P33306	851 aa		5.82	□□□□□ -1.48
LRE1	YCL051W	YFR006W	P43590	535 aa		5.8	□□□□□ -1.48
LRE1	YCL051W	DAN4	P47179	1161 aa		5.8	□□□□□ -1.48
LRE1	YCL051W	SAP30	P38429	201 aa		5.8	□□□□□ -1.48
LRE1	YCL051W	TFG1	P41895	735 aa	Predicted RBP	5.8	□□□□□ -1.48
LRE1	YCL051W	STS1	P38637	319 aa		5.79	□□□□□ -1.48
LRE1	YCL051W	CHL1	P22516	861 aa	Predicted RBP	5.78	□□□□□ -1.48
LRE1	YCL051W	JIP4	Q03361	876 aa		5.76	□□□□□ -1.49
LRE1	YCL051W	YDL129W	Q07555	291 aa		5.75	□□□□□ -1.49
LRE1	YCL051W	RTG3	P38165	486 aa		5.75	□□□□□ -1.49
LRE1	YCL051W	PRE3	P38624	215 aa		5.74	□□□□□ -1.49
LRE1	YCL051W	CST9	Q06032	482 aa		5.72	□□□□□ -1.49
LRE1	YCL051W	ABP1	P15891	592 aa	Known RBP	5.71	□□□□□ -1.5
LRE1	YCL051W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
LRE1	YCL051W	GYP5	Q12344	894 aa		5.69	□□□□□ -1.5
LRE1	YCL051W	SSP1	P38871	571 aa		5.68	□□□□□ -1.5
LRE1	YCL051W	PTC4	P38089	393 aa		5.67	□□□□□ -1.5
LRE1	YCL051W	HTA1	P04911	132 aa	Known RBP	5.67	□□□□□ -1.5
LRE1	YCL051W	HTA2	P04912	132 aa		5.67	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms