RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 KIF27Q86VH2 1401 aa10.24□□□□□ -0.77
NEDD4L-229ENST00000590506 TIAM1Q13009 1591 aa10.24□□□□□ -0.77
NEDD4L-229ENST00000590506 SKAP1Q86WV1 359 aa10.24□□□□□ -0.77
NEDD4L-229ENST00000590506 UNC13AQ9UPW8 1703 aa10.24□□□□□ -0.77
NEDD4L-229ENST00000590506 KDM5BQ9UGL1 1544 aa10.23□□□□□ -0.77
NEDD4L-229ENST00000590506 LRRC9Q6ZRR7 1453 aa10.23□□□□□ -0.77
NEDD4L-229ENST00000590506 EIF4G2P78344 907 aaKnown RBP eCLIP10.23□□□□□ -0.77
NEDD4L-229ENST00000590506 ATP1B4Q9UN42 357 aaPredicted RBP10.22□□□□□ -0.77
NEDD4L-229ENST00000590506 CCDC7Q96M83 1385 aa10.21□□□□□ -0.77
NEDD4L-229ENST00000590506 BIVM-ERCC5R4GMW8 1640 aa10.21□□□□□ -0.77
NEDD4L-229ENST00000590506 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.78
NEDD4L-229ENST00000590506 HSP90AA1P07900 732 aaKnown RBP10.2□□□□□ -0.78
NEDD4L-229ENST00000590506 MAP3K1Q13233 1512 aa10.2□□□□□ -0.78
NEDD4L-229ENST00000590506 RRP1P56182 461 aaKnown RBP10.2□□□□□ -0.78
NEDD4L-229ENST00000590506 RRP9O43818 475 aaKnown RBP10.2□□□□□ -0.78
NEDD4L-229ENST00000590506 HOMEZQ8IX15 550 aa10.19□□□□□ -0.78
NEDD4L-229ENST00000590506 CCDC18Q5T9S5 1454 aa10.18□□□□□ -0.78
NEDD4L-229ENST00000590506 NCOA1Q15788 1441 aa10.18□□□□□ -0.78
NEDD4L-229ENST00000590506 POGKQ9P215 609 aa10.17□□□□□ -0.78
NEDD4L-229ENST00000590506 P3H3Q8IVL6 736 aa10.16□□□□□ -0.78
NEDD4L-229ENST00000590506 PNNQ9H307 717 aaKnown RBP10.16□□□□□ -0.78
NEDD4L-229ENST00000590506 UACAQ9BZF9 1416 aa10.16□□□□□ -0.78
NEDD4L-229ENST00000590506 A0A0U1RQG5 324 aaPredicted RBP10.15□□□□□ -0.78
NEDD4L-229ENST00000590506 AQRO60306 1485 aaKnown RBP eCLIP10.14□□□□□ -0.798e-7■■■□□ 16.3
NEDD4L-229ENST00000590506 CUX1P39880 1505 aa10.14□□□□□ -0.79
NEDD4L-229ENST00000590506 KIF7Q2M1P5 1343 aa10.14□□□□□ -0.79
NEDD4L-229ENST00000590506 RCAN3Q9UKA8 241 aa10.13□□□□□ -0.79
NEDD4L-229ENST00000590506 BICRAQ9NZM4 1560 aa10.12□□□□□ -0.79
NEDD4L-229ENST00000590506 L1TD1Q5T7N2 865 aaKnown RBP10.12□□□□□ -0.79
NEDD4L-229ENST00000590506 POLR3GLQ9BT43 218 aa10.12□□□□□ -0.79
NEDD4L-229ENST00000590506 ARID4BQ4LE39 1312 aaPredicted RBP10.11□□□□□ -0.79
NEDD4L-229ENST00000590506 RBM10P98175 930 aaKnown RBP10.11□□□□□ -0.79
NEDD4L-229ENST00000590506 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.1□□□□□ -0.79
NEDD4L-229ENST00000590506 PLIN1O60240 522 aa10.1□□□□□ -0.79
NEDD4L-229ENST00000590506 PNISRQ8TF01 805 aaKnown RBP10.1□□□□□ -0.79
NEDD4L-229ENST00000590506 IGF1RP08069 1367 aa10.1□□□□□ -0.79
NEDD4L-229ENST00000590506 PTPN23Q9H3S7 1636 aa10.1□□□□□ -0.79
NEDD4L-229ENST00000590506 CLCN1P35523 988 aa10.1□□□□□ -0.79
NEDD4L-229ENST00000590506 KDM2AQ9Y2K7 1162 aa10.1□□□□□ -0.79
NEDD4L-229ENST00000590506 L3MBTL2Q969R5 705 aa10.09□□□□□ -0.79
NEDD4L-229ENST00000590506 FOXD4L1Q9NU39 408 aa10.09□□□□□ -0.79
NEDD4L-229ENST00000590506 PTPRKQ15262 1439 aa10.09□□□□□ -0.79
NEDD4L-229ENST00000590506 TMC1Q8TDI8 760 aa10.08□□□□□ -0.8
NEDD4L-229ENST00000590506 CRBNQ96SW2 442 aa10.08□□□□□ -0.8
NEDD4L-229ENST00000590506 CFAP43Q8NDM7 1665 aa10.08□□□□□ -0.8
NEDD4L-229ENST00000590506 HFM1A2PYH4 1435 aa10.08□□□□□ -0.8
NEDD4L-229ENST00000590506 PCF11O94913 1555 aaKnown RBP10.08□□□□□ -0.8
NEDD4L-229ENST00000590506 CARMIL1Q5VZK9 1371 aa10.08□□□□□ -0.8
NEDD4L-229ENST00000590506 DHX29Q7Z478 1369 aaKnown RBP10.08□□□□□ -0.8
NEDD4L-229ENST00000590506 DNAJC5BQ9UF47 199 aa10.07□□□□□ -0.8
NEDD4L-229ENST00000590506 ABCA5Q8WWZ7 1642 aa10.07□□□□□ -0.8
NEDD4L-229ENST00000590506 XRCC6P12956 609 aaKnown RBP eCLIP10.07□□□□□ -0.8
NEDD4L-229ENST00000590506 FAM161AQ3B820 660 aa10.07□□□□□ -0.8
NEDD4L-229ENST00000590506 C8orf34Q49A92 452 aa10.07□□□□□ -0.8
NEDD4L-229ENST00000590506 FGD6Q6ZV73 1430 aa10.07□□□□□ -0.8
NEDD4L-229ENST00000590506 NBPF8Q3BBV2 869 aa10.06□□□□□ -0.8
NEDD4L-229ENST00000590506 PANK2Q9BZ23 570 aa10.06□□□□□ -0.8
NEDD4L-229ENST00000590506 NAIPQ13075 1403 aa10.06□□□□□ -0.8
NEDD4L-229ENST00000590506 FBLN2P98095 1184 aa10.05□□□□□ -0.8
NEDD4L-229ENST00000590506 AAMPQ13685 434 aa10.05□□□□□ -0.8
NEDD4L-229ENST00000590506 POLR1AO95602 1720 aaPredicted RBP10.05□□□□□ -0.8
NEDD4L-229ENST00000590506 FHOD3Q2V2M9 1422 aa10.04□□□□□ -0.8
NEDD4L-229ENST00000590506 FMN1Q68DA7 1419 aa10.04□□□□□ -0.8
NEDD4L-229ENST00000590506 GOLGA6L3A6NEY3 463 aa10.04□□□□□ -0.8
NEDD4L-229ENST00000590506 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
NEDD4L-229ENST00000590506 FOXD1Q16676 465 aa10.03□□□□□ -0.8
NEDD4L-229ENST00000590506 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
NEDD4L-229ENST00000590506 PRDM4Q9UKN5 801 aa10.03□□□□□ -0.8
NEDD4L-229ENST00000590506 KTN1Q86UP2 1357 aaKnown RBP10.03□□□□□ -0.8
NEDD4L-229ENST00000590506 RGS3P49796 1198 aa10.02□□□□□ -0.81
NEDD4L-229ENST00000590506 RRP7BPQ9NSQ0 103 aa10.02□□□□□ -0.81
NEDD4L-229ENST00000590506 FYCO1Q9BQS8 1478 aa10.02□□□□□ -0.81
NEDD4L-229ENST00000590506 MTUS2Q5JR59 1369 aa10.02□□□□□ -0.81
NEDD4L-229ENST00000590506 GZF1Q9H116 711 aaPredicted RBP10.02□□□□□ -0.81
NEDD4L-229ENST00000590506 DENND4BO75064 1496 aaPredicted RBP10.01□□□□□ -0.81
NEDD4L-229ENST00000590506 SPATA31E1Q6ZUB1 1445 aa10.01□□□□□ -0.81
NEDD4L-229ENST00000590506 KDM2BQ8NHM5 1336 aa10.01□□□□□ -0.81
NEDD4L-229ENST00000590506 CALD1Q05682 793 aaKnown RBP10.01□□□□□ -0.81
NEDD4L-229ENST00000590506 C20orf194Q5TEA3 1177 aa10.01□□□□□ -0.81
NEDD4L-229ENST00000590506 PDCL3Q9H2J4 239 aa10.01□□□□□ -0.81
NEDD4L-229ENST00000590506 CASKIN1Q8WXD9 1431 aa10.01□□□□□ -0.81
NEDD4L-229ENST00000590506 LRPPRCP42704 1394 aaKnown RBP10□□□□□ -0.81
NEDD4L-229ENST00000590506 FGD1P98174 961 aa10□□□□□ -0.81
NEDD4L-229ENST00000590506 CHIC2Q9UKJ5 165 aa10□□□□□ -0.81
NEDD4L-229ENST00000590506 FSD2A1L4K1 749 aa9.99□□□□□ -0.81
NEDD4L-229ENST00000590506 ERBB4Q15303 1308 aa9.99□□□□□ -0.81
NEDD4L-229ENST00000590506 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
NEDD4L-229ENST00000590506 FGD5Q6ZNL6 1462 aa9.99□□□□□ -0.81
NEDD4L-229ENST00000590506 CENPQQ7L2Z9 268 aaPredicted RBP9.98□□□□□ -0.81
NEDD4L-229ENST00000590506 CENPJQ9HC77 1338 aaPredicted RBP9.98□□□□□ -0.81
NEDD4L-229ENST00000590506 ESPNB1AK53 854 aa9.98□□□□□ -0.81
NEDD4L-229ENST00000590506 TPM2P07951 284 aa9.98□□□□□ -0.81
NEDD4L-229ENST00000590506 PDE3BQ13370 1112 aa9.97□□□□□ -0.81
NEDD4L-229ENST00000590506 BCORL1Q5H9F3 1711 aa9.97□□□□□ -0.81
NEDD4L-229ENST00000590506 MPHOSPH9Q99550 1183 aa9.97□□□□□ -0.81
NEDD4L-229ENST00000590506 HECW1Q76N89 1606 aa9.96□□□□□ -0.81
NEDD4L-229ENST00000590506 CFTRP13569 1480 aa9.96□□□□□ -0.81
NEDD4L-229ENST00000590506 USP19O94966 1318 aa9.96□□□□□ -0.82
NEDD4L-229ENST00000590506 BECN1Q14457 450 aa9.96□□□□□ -0.82
NEDD4L-229ENST00000590506 MYOM3Q5VTT5 1437 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms