RNA–Protein interactions for RNA: ENST00000541888.2

AC005840.3-201, humanhuman

TSL 5 BASIC

Gene AC005840.3, Length 1,803 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005840.3-201ENST00000541888 ARHGAP35Q9NRY4 1499 aa12.19□□□□□ -0.46
AC005840.3-201ENST00000541888 CHD1O14646 1710 aa12.19□□□□□ -0.46
AC005840.3-201ENST00000541888 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
AC005840.3-201ENST00000541888 KIF12Q96FN5 646 aa12.18□□□□□ -0.46
AC005840.3-201ENST00000541888 GRIN2AQ12879 1464 aa12.17□□□□□ -0.46
AC005840.3-201ENST00000541888 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
AC005840.3-201ENST00000541888 DCAF8Q5TAQ9 597 aa12.16□□□□□ -0.46
AC005840.3-201ENST00000541888 MAGI1Q96QZ7 1491 aaPredicted RBP12.16□□□□□ -0.46
AC005840.3-201ENST00000541888 CEP170Q5SW79 1584 aa12.16□□□□□ -0.46
AC005840.3-201ENST00000541888 SYNJ2O15056 1496 aa12.15□□□□□ -0.46
AC005840.3-201ENST00000541888 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
AC005840.3-201ENST00000541888 FHOD3Q2V2M9 1422 aa12.15□□□□□ -0.47
AC005840.3-201ENST00000541888 DCBLD2Q96PD2 775 aa12.14□□□□□ -0.47
AC005840.3-201ENST00000541888 MAP3K13O43283 966 aa12.13□□□□□ -0.47
AC005840.3-201ENST00000541888 SPOCK2Q92563 424 aa12.12□□□□□ -0.47
AC005840.3-201ENST00000541888 IQGAP2Q13576 1575 aa12.12□□□□□ -0.47
AC005840.3-201ENST00000541888 VPS8Q8N3P4 1428 aa12.11□□□□□ -0.47
AC005840.3-201ENST00000541888 ATP1B4Q9UN42 357 aaPredicted RBP12.09□□□□□ -0.47
AC005840.3-201ENST00000541888 PCGF6Q9BYE7 350 aa12.08□□□□□ -0.48
AC005840.3-201ENST00000541888 PCF11O94913 1555 aaKnown RBP12.07□□□□□ -0.48
AC005840.3-201ENST00000541888 SAMD9Q5K651 1589 aa12.07□□□□□ -0.48
AC005840.3-201ENST00000541888 GSE1Q14687 1217 aa12.07□□□□□ -0.48
AC005840.3-201ENST00000541888 ARID3CA6NKF2 412 aa12.06□□□□□ -0.48
AC005840.3-201ENST00000541888 PYGBP11216 843 aa12.05□□□□□ -0.48
AC005840.3-201ENST00000541888 SGIP1Q9BQI5 828 aa12.04□□□□□ -0.48
AC005840.3-201ENST00000541888 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
AC005840.3-201ENST00000541888 KIAA0586Q9BVV6 1533 aa12.04□□□□□ -0.48
AC005840.3-201ENST00000541888 NUP160Q12769 1436 aa12.04□□□□□ -0.48
AC005840.3-201ENST00000541888 EFCAB5A4FU69 1503 aa12.03□□□□□ -0.48
AC005840.3-201ENST00000541888 LRRIQ1Q96JM4 1722 aa12.03□□□□□ -0.48
AC005840.3-201ENST00000541888 TRPC6Q9Y210 931 aa12.02□□□□□ -0.48
AC005840.3-201ENST00000541888 DISP1Q96F81 1524 aa12.02□□□□□ -0.49
AC005840.3-201ENST00000541888 KANK4Q5T7N3 995 aaPredicted RBP12.02□□□□□ -0.49
AC005840.3-201ENST00000541888 KIAA0556O60303 1618 aa12.02□□□□□ -0.49
AC005840.3-201ENST00000541888 ERCC6L2Q5T890 1561 aa12□□□□□ -0.49
AC005840.3-201ENST00000541888 UGGT2Q9NYU1 1516 aa12□□□□□ -0.49
AC005840.3-201ENST00000541888 ASTLQ6HA08 431 aaPredicted RBP12□□□□□ -0.49
AC005840.3-201ENST00000541888 IFNL1Q8IU54 200 aa12□□□□□ -0.49
AC005840.3-201ENST00000541888 JPH4Q96JJ6 628 aa12□□□□□ -0.49
AC005840.3-201ENST00000541888 CIZ1Q9ULV3 898 aaPredicted RBP12□□□□□ -0.49
AC005840.3-201ENST00000541888 ATMINO43313 823 aaPredicted RBP11.98□□□□□ -0.49
AC005840.3-201ENST00000541888 PELP1Q8IZL8 1130 aaKnown RBP11.98□□□□□ -0.49
AC005840.3-201ENST00000541888 BMP2KQ9NSY1 1161 aaPredicted RBP11.96□□□□□ -0.49
AC005840.3-201ENST00000541888 CHRM1P11229 460 aaPredicted RBP11.95□□□□□ -0.5
AC005840.3-201ENST00000541888 PRG4Q92954 1404 aaPredicted RBP11.95□□□□□ -0.5
AC005840.3-201ENST00000541888 TIE1P35590 1138 aa11.95□□□□□ -0.5
AC005840.3-201ENST00000541888 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
AC005840.3-201ENST00000541888 TIAM1Q13009 1591 aa11.94□□□□□ -0.5
AC005840.3-201ENST00000541888 FMN1Q68DA7 1419 aa11.93□□□□□ -0.5
AC005840.3-201ENST00000541888 ATN1P54259 1190 aaPredicted RBP11.93□□□□□ -0.5
AC005840.3-201ENST00000541888 CDK13Q14004 1512 aaKnown RBP11.93□□□□□ -0.5
AC005840.3-201ENST00000541888 CLASP1Q7Z460 1538 aa11.93□□□□□ -0.5
AC005840.3-201ENST00000541888 PLB1Q6P1J6 1458 aa11.93□□□□□ -0.5
AC005840.3-201ENST00000541888 PCDHB8Q9UN66 801 aa11.93□□□□□ -0.5
AC005840.3-201ENST00000541888 CFAP43Q8NDM7 1665 aa11.92□□□□□ -0.5
AC005840.3-201ENST00000541888 FYCO1Q9BQS8 1478 aa11.92□□□□□ -0.5
AC005840.3-201ENST00000541888 CASKIN1Q8WXD9 1431 aa11.91□□□□□ -0.5
AC005840.3-201ENST00000541888 SHROOM2Q13796 1616 aa11.91□□□□□ -0.5
AC005840.3-201ENST00000541888 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
AC005840.3-201ENST00000541888 LHX8Q68G74 356 aa11.89□□□□□ -0.51
AC005840.3-201ENST00000541888 RAPGEF6Q8TEU7 1601 aa11.89□□□□□ -0.51
AC005840.3-201ENST00000541888 CARMIL2Q6F5E8 1435 aa11.89□□□□□ -0.51
AC005840.3-201ENST00000541888 MAGI3Q5TCQ9 1506 aa11.88□□□□□ -0.51
AC005840.3-201ENST00000541888 HECW1Q76N89 1606 aa11.87□□□□□ -0.51
AC005840.3-201ENST00000541888 LRRC9Q6ZRR7 1453 aa11.87□□□□□ -0.51
AC005840.3-201ENST00000541888 NUP153P49790 1475 aaKnown RBP11.86□□□□□ -0.51
AC005840.3-201ENST00000541888 ZNF467Q7Z7K2 595 aaPredicted RBP11.86□□□□□ -0.51
AC005840.3-201ENST00000541888 SLC39A7Q92504 469 aa11.86□□□□□ -0.51
AC005840.3-201ENST00000541888 TMEM106CQ9BVX2 250 aa11.86□□□□□ -0.51
AC005840.3-201ENST00000541888 EPRSP07814 1512 aaKnown RBP11.85□□□□□ -0.51
AC005840.3-201ENST00000541888 C7P10643 843 aa11.85□□□□□ -0.51
AC005840.3-201ENST00000541888 METRNQ9UJH8 293 aa11.83□□□□□ -0.51
AC005840.3-201ENST00000541888 PTPRGP23470 1445 aa11.83□□□□□ -0.52
AC005840.3-201ENST00000541888 PHLDB1Q86UU1 1377 aa11.82□□□□□ -0.52
AC005840.3-201ENST00000541888 TRIM35Q9UPQ4 493 aa11.82□□□□□ -0.52
AC005840.3-201ENST00000541888 MTUS2Q5JR59 1369 aa11.82□□□□□ -0.52
AC005840.3-201ENST00000541888 ABCA8O94911 1581 aa11.81□□□□□ -0.52
AC005840.3-201ENST00000541888 ITGAEP38570 1179 aa11.81□□□□□ -0.52
AC005840.3-201ENST00000541888 MAP3K1Q13233 1512 aa11.79□□□□□ -0.52
AC005840.3-201ENST00000541888 POTEB2H3BUK9 544 aa11.79□□□□□ -0.52
AC005840.3-201ENST00000541888 CCDC18Q5T9S5 1454 aa11.78□□□□□ -0.52
AC005840.3-201ENST00000541888 KIF14Q15058 1648 aa11.77□□□□□ -0.53
AC005840.3-201ENST00000541888 ATP10BO94823 1461 aa11.76□□□□□ -0.53
AC005840.3-201ENST00000541888 PSEN1P49768 467 aa11.76□□□□□ -0.53
AC005840.3-201ENST00000541888 NCOA2Q15596 1464 aa11.76□□□□□ -0.53
AC005840.3-201ENST00000541888 SUPT6HQ7KZ85 1726 aaKnown RBP11.76□□□□□ -0.53
AC005840.3-201ENST00000541888 EHBP1L1Q8N3D4 1523 aa11.75□□□□□ -0.53
AC005840.3-201ENST00000541888 POTEFA5A3E0 1075 aa11.75□□□□□ -0.53
AC005840.3-201ENST00000541888 UACAQ9BZF9 1416 aa11.75□□□□□ -0.53
AC005840.3-201ENST00000541888 FAM50AQ14320 339 aaKnown RBP11.74□□□□□ -0.53
AC005840.3-201ENST00000541888 IER5LQ5T953 404 aa11.74□□□□□ -0.53
AC005840.3-201ENST00000541888 ADCY10Q96PN6 1610 aa11.74□□□□□ -0.53
AC005840.3-201ENST00000541888 HRCP23327 699 aa11.73□□□□□ -0.53
AC005840.3-201ENST00000541888 PDAP1Q13442 181 aaKnown RBP11.73□□□□□ -0.53
AC005840.3-201ENST00000541888 ABCC2Q92887 1545 aa11.72□□□□□ -0.53
AC005840.3-201ENST00000541888 ZCCHC11Q5TAX3 1644 aaKnown RBP11.72□□□□□ -0.53
AC005840.3-201ENST00000541888 COLQQ9Y215 455 aaPredicted RBP11.72□□□□□ -0.53
AC005840.3-201ENST00000541888 CCNB3Q8WWL7 1395 aa11.71□□□□□ -0.53
AC005840.3-201ENST00000541888 RNF25Q96BH1 459 aaPredicted RBP11.71□□□□□ -0.54
AC005840.3-201ENST00000541888 ARHGEF11O15085 1522 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms