RNA–Protein interactions for RNA: ENST00000479034.5

SRRM1-212, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,671 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-212ENST00000479034 PCGF6Q9BYE7 350 aa11.22□□□□□ -0.61
SRRM1-212ENST00000479034 CACNB1Q02641 598 aaPredicted RBP11.21□□□□□ -0.61
SRRM1-212ENST00000479034 VPS8Q8N3P4 1428 aa11.2□□□□□ -0.62
SRRM1-212ENST00000479034 CDK13Q14004 1512 aaKnown RBP11.2□□□□□ -0.62
SRRM1-212ENST00000479034 CARMIL2Q6F5E8 1435 aa11.19□□□□□ -0.62
SRRM1-212ENST00000479034 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
SRRM1-212ENST00000479034 KIAA0556O60303 1618 aa11.18□□□□□ -0.62
SRRM1-212ENST00000479034 PCF11O94913 1555 aaKnown RBP11.17□□□□□ -0.62
SRRM1-212ENST00000479034 ARHGEF11O15085 1522 aa11.17□□□□□ -0.62
SRRM1-212ENST00000479034 UGGT2Q9NYU1 1516 aa11.16□□□□□ -0.62
SRRM1-212ENST00000479034 CHGAP10645 457 aaKnown RBP11.16□□□□□ -0.62
SRRM1-212ENST00000479034 STAG3Q9UJ98 1225 aa11.16□□□□□ -0.62
SRRM1-212ENST00000479034 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
SRRM1-212ENST00000479034 ZNF777Q9ULD5 760 aaPredicted RBP11.14□□□□□ -0.63
SRRM1-212ENST00000479034 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
SRRM1-212ENST00000479034 TSHZ2Q9NRE2 1034 aa11.13□□□□□ -0.63
SRRM1-212ENST00000479034 FMN1Q68DA7 1419 aa11.12□□□□□ -0.63
SRRM1-212ENST00000479034 NUP153P49790 1475 aaKnown RBP11.12□□□□□ -0.63
SRRM1-212ENST00000479034 MTUS2Q5JR59 1369 aa11.11□□□□□ -0.63
SRRM1-212ENST00000479034 FAM50AQ14320 339 aaKnown RBP11.11□□□□□ -0.63
SRRM1-212ENST00000479034 DNAJC5Q9H3Z4 198 aa11.1□□□□□ -0.63
SRRM1-212ENST00000479034 ZNF644Q9H582 1327 aaPredicted RBP11.09□□□□□ -0.63
SRRM1-212ENST00000479034 EFCAB5A4FU69 1503 aa11.09□□□□□ -0.63
SRRM1-212ENST00000479034 RIMBP3CA6NJZ7 1639 aa11.09□□□□□ -0.63
SRRM1-212ENST00000479034 RIMBP3BA6NNM3 1639 aa11.09□□□□□ -0.63
SRRM1-212ENST00000479034 RIMBP3Q9UFD9 1639 aa11.09□□□□□ -0.63
SRRM1-212ENST00000479034 UACAQ9BZF9 1416 aa11.09□□□□□ -0.63
SRRM1-212ENST00000479034 BBXQ8WY36 941 aaPredicted RBP11.08□□□□□ -0.64
SRRM1-212ENST00000479034 CASKIN1Q8WXD9 1431 aa11.08□□□□□ -0.64
SRRM1-212ENST00000479034 MAGI3Q5TCQ9 1506 aa11.07□□□□□ -0.64
SRRM1-212ENST00000479034 PLEKHD1A6NEE1 506 aa11.07□□□□□ -0.64
SRRM1-212ENST00000479034 ATP10BO94823 1461 aa11.07□□□□□ -0.64
SRRM1-212ENST00000479034 EPRSP07814 1512 aaKnown RBP11.07□□□□□ -0.64
SRRM1-212ENST00000479034 SHROOM2Q13796 1616 aa11.07□□□□□ -0.64
SRRM1-212ENST00000479034 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.07□□□□□ -0.64
SRRM1-212ENST00000479034 CLEC11AQ9Y240 323 aa11.07□□□□□ -0.64
SRRM1-212ENST00000479034 PHLDB1Q86UU1 1377 aa11.05□□□□□ -0.64
SRRM1-212ENST00000479034 CHIC2Q9UKJ5 165 aa11.05□□□□□ -0.64
SRRM1-212ENST00000479034 LRRIQ1Q96JM4 1722 aa11.05□□□□□ -0.64
SRRM1-212ENST00000479034 RAPGEF6Q8TEU7 1601 aa11.03□□□□□ -0.64
SRRM1-212ENST00000479034 FYCO1Q9BQS8 1478 aa11.03□□□□□ -0.64
SRRM1-212ENST00000479034 ADCY10Q96PN6 1610 aa11.02□□□□□ -0.65
SRRM1-212ENST00000479034 FAM69CQ0P6D2 419 aa11.02□□□□□ -0.65
SRRM1-212ENST00000479034 LRRC9Q6ZRR7 1453 aa11.01□□□□□ -0.65
SRRM1-212ENST00000479034 VSIG10Q8N0Z9 540 aa11□□□□□ -0.65
SRRM1-212ENST00000479034 ABCA8O94911 1581 aa11□□□□□ -0.65
SRRM1-212ENST00000479034 TIAM1Q13009 1591 aa11□□□□□ -0.65
SRRM1-212ENST00000479034 ABCC2Q92887 1545 aa10.99□□□□□ -0.65
SRRM1-212ENST00000479034 SPRYD3Q8NCJ5 442 aa10.99□□□□□ -0.65
SRRM1-212ENST00000479034 TAOK2Q9UL54 1235 aa10.99□□□□□ -0.65
SRRM1-212ENST00000479034 CDK11AQ9UQ88 783 aaPredicted RBP10.99□□□□□ -0.65
SRRM1-212ENST00000479034 BCANQ96GW7 911 aa10.99□□□□□ -0.65
SRRM1-212ENST00000479034 ASXL2Q76L83 1435 aa10.99□□□□□ -0.65
SRRM1-212ENST00000479034 NKX1-1Q15270 411 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-212ENST00000479034 HNRNPMP52272 730 aaKnown RBP eCLIP10.98□□□□□ -0.651e-9■■■■■ 32.3
SRRM1-212ENST00000479034 TRIM26Q12899 539 aaPredicted RBP10.98□□□□□ -0.65
SRRM1-212ENST00000479034 KIF14Q15058 1648 aa10.97□□□□□ -0.65
SRRM1-212ENST00000479034 HECW1Q76N89 1606 aa10.97□□□□□ -0.65
SRRM1-212ENST00000479034 CFDP1Q9UEE9 299 aaPredicted RBP10.97□□□□□ -0.65
SRRM1-212ENST00000479034 NUBP1P53384 320 aa10.97□□□□□ -0.65
SRRM1-212ENST00000479034 MYT1LQ9UL68 1186 aa10.97□□□□□ -0.65
SRRM1-212ENST00000479034 NCOA2Q15596 1464 aa10.96□□□□□ -0.65
SRRM1-212ENST00000479034 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
SRRM1-212ENST00000479034 RRP7BPQ9NSQ0 103 aa10.94□□□□□ -0.66
SRRM1-212ENST00000479034 CCNB3Q8WWL7 1395 aa10.94□□□□□ -0.66
SRRM1-212ENST00000479034 ZCCHC11Q5TAX3 1644 aaKnown RBP10.94□□□□□ -0.66
SRRM1-212ENST00000479034 MNX1P50219 401 aaPredicted RBP10.93□□□□□ -0.66
SRRM1-212ENST00000479034 TPRNQ4KMQ1 711 aa10.93□□□□□ -0.66
SRRM1-212ENST00000479034 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
SRRM1-212ENST00000479034 RASEFQ8IZ41 740 aa10.93□□□□□ -0.66
SRRM1-212ENST00000479034 TROQ12816 1431 aaPredicted RBP10.93□□□□□ -0.66
SRRM1-212ENST00000479034 RAPGEF3O95398 923 aa10.92□□□□□ -0.66
SRRM1-212ENST00000479034 AFAP1Q8N556 730 aa10.92□□□□□ -0.66
SRRM1-212ENST00000479034 CREBZFQ9NS37 354 aa10.92□□□□□ -0.66
SRRM1-212ENST00000479034 KDM5BQ9UGL1 1544 aa10.91□□□□□ -0.66
SRRM1-212ENST00000479034 CCDC18Q5T9S5 1454 aa10.91□□□□□ -0.66
SRRM1-212ENST00000479034 WDR7Q9Y4E6 1490 aa10.89□□□□□ -0.67
SRRM1-212ENST00000479034 ZBTB47Q9UFB7 747 aaPredicted RBP10.89□□□□□ -0.67
SRRM1-212ENST00000479034 TTC37Q6PGP7 1564 aa10.88□□□□□ -0.67
SRRM1-212ENST00000479034 PYGBP11216 843 aa10.88□□□□□ -0.67
SRRM1-212ENST00000479034 PRR29P0C7W0 189 aa10.88□□□□□ -0.67
SRRM1-212ENST00000479034 REM2Q8IYK8 340 aaPredicted RBP10.88□□□□□ -0.67
SRRM1-212ENST00000479034 CFAP43Q8NDM7 1665 aa10.87□□□□□ -0.67
SRRM1-212ENST00000479034 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.86□□□□□ -0.67
SRRM1-212ENST00000479034 GPATCH8Q9UKJ3 1502 aaKnown RBP10.86□□□□□ -0.67
SRRM1-212ENST00000479034 PTPRKQ15262 1439 aa10.86□□□□□ -0.67
SRRM1-212ENST00000479034 STK25O00506 426 aa10.86□□□□□ -0.67
SRRM1-212ENST00000479034 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
SRRM1-212ENST00000479034 HS6ST3Q8IZP7 471 aa10.86□□□□□ -0.67
SRRM1-212ENST00000479034 UHRF1BP1LA0JNW5 1464 aa10.86□□□□□ -0.67
SRRM1-212ENST00000479034 MYOM3Q5VTT5 1437 aa10.85□□□□□ -0.67
SRRM1-212ENST00000479034 CHADLQ6NUI6 762 aa10.85□□□□□ -0.67
SRRM1-212ENST00000479034 TSPOAP1O95153 1857 aa10.85□□□□□ -0.67
SRRM1-212ENST00000479034 EHBP1L1Q8N3D4 1523 aa10.85□□□□□ -0.67
SRRM1-212ENST00000479034 CD109Q6YHK3 1445 aa10.85□□□□□ -0.67
SRRM1-212ENST00000479034 ARHGAP5Q13017 1502 aa10.84□□□□□ -0.67
SRRM1-212ENST00000479034 SPDYE1Q8NFV5 336 aaPredicted RBP10.84□□□□□ -0.67
SRRM1-212ENST00000479034 ABCC10Q5T3U5 1492 aa10.82□□□□□ -0.68
SRRM1-212ENST00000479034 SUPT6HQ7KZ85 1726 aaKnown RBP10.82□□□□□ -0.68
SRRM1-212ENST00000479034 PITPNM1O00562 1244 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms