RNA–Protein interactions for RNA: ENST00000401605.5

CLIP4-202, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2 BASIC

Gene CLIP4, Length 2,322 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-202ENST00000401605 TRIM26Q12899 539 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-202ENST00000401605 MAPK8IP2Q13387 824 aaPredicted RBP9.29□□□□□ -0.92
CLIP4-202ENST00000401605 KDM6BO15054 1643 aa9.29□□□□□ -0.92
CLIP4-202ENST00000401605 RNF216Q9NWF9 866 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-202ENST00000401605 WDR7Q9Y4E6 1490 aa9.28□□□□□ -0.92
CLIP4-202ENST00000401605 ATF5Q9Y2D1 282 aaPredicted RBP9.28□□□□□ -0.92
CLIP4-202ENST00000401605 UBTFP17480 764 aaKnown RBP9.27□□□□□ -0.92
CLIP4-202ENST00000401605 P3H3Q8IVL6 736 aa9.27□□□□□ -0.93
CLIP4-202ENST00000401605 TEX14Q8IWB6 1497 aa9.26□□□□□ -0.93
CLIP4-202ENST00000401605 ABCA8O94911 1581 aa9.26□□□□□ -0.93
CLIP4-202ENST00000401605 KCNH8Q96L42 1107 aa9.25□□□□□ -0.93
CLIP4-202ENST00000401605 ZCCHC11Q5TAX3 1644 aaKnown RBP9.25□□□□□ -0.93
CLIP4-202ENST00000401605 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
CLIP4-202ENST00000401605 CTTNBP2Q8WZ74 1663 aa9.24□□□□□ -0.93
CLIP4-202ENST00000401605 KDM4FA0A1W2PPD8 638 aa9.23□□□□□ -0.93
CLIP4-202ENST00000401605 CD109Q6YHK3 1445 aa9.23□□□□□ -0.93
CLIP4-202ENST00000401605 COL17A1Q9UMD9 1497 aaPredicted RBP9.23□□□□□ -0.93
CLIP4-202ENST00000401605 ARID3CA6NKF2 412 aa9.22□□□□□ -0.93
CLIP4-202ENST00000401605 MAGI3Q5TCQ9 1506 aa9.22□□□□□ -0.93
CLIP4-202ENST00000401605 ATP10BO94823 1461 aa9.22□□□□□ -0.93
CLIP4-202ENST00000401605 MAP3K4Q9Y6R4 1608 aa9.21□□□□□ -0.94
CLIP4-202ENST00000401605 TSPOAP1O95153 1857 aa9.2□□□□□ -0.94
CLIP4-202ENST00000401605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.2□□□□□ -0.94
CLIP4-202ENST00000401605 HNRNPUL2Q1KMD3 747 aaKnown RBP9.2□□□□□ -0.94
CLIP4-202ENST00000401605 PPRC1Q5VV67 1664 aaKnown RBP9.2□□□□□ -0.94
CLIP4-202ENST00000401605 SAMD9Q5K651 1589 aa9.19□□□□□ -0.94
CLIP4-202ENST00000401605 FHOD3Q2V2M9 1422 aa9.18□□□□□ -0.94
CLIP4-202ENST00000401605 PHLDB1Q86UU1 1377 aa9.17□□□□□ -0.94
CLIP4-202ENST00000401605 NUP153P49790 1475 aaKnown RBP9.16□□□□□ -0.94
CLIP4-202ENST00000401605 PLEKHD1A6NEE1 506 aa9.16□□□□□ -0.94
CLIP4-202ENST00000401605 KIF21BO75037 1637 aa9.15□□□□□ -0.94
CLIP4-202ENST00000401605 ADGRL1O94910 1474 aa9.15□□□□□ -0.94
CLIP4-202ENST00000401605 RAPGEF6Q8TEU7 1601 aa9.14□□□□□ -0.95
CLIP4-202ENST00000401605 EFCAB5A4FU69 1503 aa9.14□□□□□ -0.95
CLIP4-202ENST00000401605 CFAP43Q8NDM7 1665 aa9.14□□□□□ -0.95
CLIP4-202ENST00000401605 ECM2O94769 699 aaPredicted RBP9.14□□□□□ -0.95
CLIP4-202ENST00000401605 ANP32EQ9BTT0 268 aa9.14□□□□□ -0.95
CLIP4-202ENST00000401605 ARAP3Q8WWN8 1544 aa9.13□□□□□ -0.95
CLIP4-202ENST00000401605 NEO1Q92859 1461 aa9.12□□□□□ -0.95
CLIP4-202ENST00000401605 RGL2O15211 777 aa9.11□□□□□ -0.95
CLIP4-202ENST00000401605 RAPGEF3O95398 923 aa9.11□□□□□ -0.95
CLIP4-202ENST00000401605 FMN1Q68DA7 1419 aa9.11□□□□□ -0.95
CLIP4-202ENST00000401605 ABCA9Q8IUA7 1624 aa9.1□□□□□ -0.95
CLIP4-202ENST00000401605 MSH5O43196 834 aa9.1□□□□□ -0.95
CLIP4-202ENST00000401605 PKNOX2Q96KN3 472 aa9.1□□□□□ -0.95
CLIP4-202ENST00000401605 SPDYE4A6NLX3 237 aa9.09□□□□□ -0.95
CLIP4-202ENST00000401605 ATP1B4Q9UN42 357 aaPredicted RBP9.09□□□□□ -0.95
CLIP4-202ENST00000401605 CDK11AQ9UQ88 783 aaPredicted RBP9.09□□□□□ -0.95
CLIP4-202ENST00000401605 ARHGAP35Q9NRY4 1499 aa9.08□□□□□ -0.96
CLIP4-202ENST00000401605 PROM2Q8N271 834 aa9.07□□□□□ -0.96
CLIP4-202ENST00000401605 NEFLP07196 543 aa9.06□□□□□ -0.96
CLIP4-202ENST00000401605 PDIA4P13667 645 aaKnown RBP9.06□□□□□ -0.96
CLIP4-202ENST00000401605 FANCAO15360 1455 aa9.06□□□□□ -0.96
CLIP4-202ENST00000401605 DENND4BO75064 1496 aaPredicted RBP9.06□□□□□ -0.96
CLIP4-202ENST00000401605 AKNAQ7Z591 1439 aa9.06□□□□□ -0.96
CLIP4-202ENST00000401605 CDK13Q14004 1512 aaKnown RBP9.05□□□□□ -0.96
CLIP4-202ENST00000401605 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.05□□□□□ -0.96
CLIP4-202ENST00000401605 ARID4BQ4LE39 1312 aaPredicted RBP9.04□□□□□ -0.96
CLIP4-202ENST00000401605 PLCH2O75038 1416 aa9.04□□□□□ -0.96
CLIP4-202ENST00000401605 BRPF1P55201 1214 aaPredicted RBP9.03□□□□□ -0.96
CLIP4-202ENST00000401605 EFCAB2Q5VUJ9 269 aa9.03□□□□□ -0.96
CLIP4-202ENST00000401605 HECW1Q76N89 1606 aa9.02□□□□□ -0.97
CLIP4-202ENST00000401605 CLIP1P30622 1438 aa9.01□□□□□ -0.97
CLIP4-202ENST00000401605 TROQ12816 1431 aaPredicted RBP9.01□□□□□ -0.97
CLIP4-202ENST00000401605 CHGAP10645 457 aaKnown RBP9.01□□□□□ -0.97
CLIP4-202ENST00000401605 SCAPERQ9BY12 1400 aa9.01□□□□□ -0.97
CLIP4-202ENST00000401605 FRMPD1Q5SYB0 1578 aa9□□□□□ -0.97
CLIP4-202ENST00000401605 TTC37Q6PGP7 1564 aa9□□□□□ -0.97
CLIP4-202ENST00000401605 MAGI2Q86UL8 1455 aa9□□□□□ -0.97
CLIP4-202ENST00000401605 CFAP74Q9C0B2 1584 aa8.99□□□□□ -0.97
CLIP4-202ENST00000401605 CASKIN1Q8WXD9 1431 aa8.99□□□□□ -0.97
CLIP4-202ENST00000401605 POGZQ7Z3K3 1410 aa8.99□□□□□ -0.97
CLIP4-202ENST00000401605 PTPRMP28827 1452 aa8.99□□□□□ -0.97
CLIP4-202ENST00000401605 ARHGEF40Q8TER5 1519 aa8.98□□□□□ -0.97
CLIP4-202ENST00000401605 ZMYM4Q5VZL5 1548 aa8.98□□□□□ -0.97
CLIP4-202ENST00000401605 HOXD11P31277 338 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-202ENST00000401605 ANO8Q9HCE9 1232 aaPredicted RBP8.98□□□□□ -0.97
CLIP4-202ENST00000401605 HECW2Q9P2P5 1572 aa8.98□□□□□ -0.97
CLIP4-202ENST00000401605 YEATS2Q9ULM3 1422 aa8.97□□□□□ -0.97
CLIP4-202ENST00000401605 CCDC18Q5T9S5 1454 aa8.97□□□□□ -0.97
CLIP4-202ENST00000401605 PDE4CQ08493 712 aa8.97□□□□□ -0.97
CLIP4-202ENST00000401605 ZFYVE16Q7Z3T8 1539 aa8.96□□□□□ -0.97
CLIP4-202ENST00000401605 KIF14Q15058 1648 aa8.96□□□□□ -0.98
CLIP4-202ENST00000401605 ZNF518AQ6AHZ1 1483 aa8.95□□□□□ -0.98
CLIP4-202ENST00000401605 AFAP1Q8N556 730 aa8.95□□□□□ -0.98
CLIP4-202ENST00000401605 ADAMTSL3P82987 1691 aa8.95□□□□□ -0.98
CLIP4-202ENST00000401605 ARHGAP5Q13017 1502 aa8.95□□□□□ -0.98
CLIP4-202ENST00000401605 FYCO1Q9BQS8 1478 aa8.94□□□□□ -0.98
CLIP4-202ENST00000401605 ACIN1Q9UKV3 1341 aaKnown RBP8.94□□□□□ -0.98
CLIP4-202ENST00000401605 ATP10AO60312 1499 aa8.94□□□□□ -0.98
CLIP4-202ENST00000401605 RICTORQ6R327 1708 aa8.94□□□□□ -0.98
CLIP4-202ENST00000401605 C9orf84Q5VXU9 1444 aa8.93□□□□□ -0.98
CLIP4-202ENST00000401605 MLECQ14165 292 aa8.93□□□□□ -0.98
CLIP4-202ENST00000401605 MYT1LQ9UL68 1186 aa8.93□□□□□ -0.98
CLIP4-202ENST00000401605 PCF11O94913 1555 aaKnown RBP8.93□□□□□ -0.98
CLIP4-202ENST00000401605 SPOCK2Q92563 424 aa8.92□□□□□ -0.98
CLIP4-202ENST00000401605 BCORL1Q5H9F3 1711 aa8.92□□□□□ -0.98
CLIP4-202ENST00000401605 ILDR1Q86SU0 546 aaPredicted RBP8.91□□□□□ -0.98
CLIP4-202ENST00000401605 MADDQ8WXG6 1647 aa8.91□□□□□ -0.98
CLIP4-202ENST00000401605 ARID3AQ99856 593 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms