RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 SLC4A3P48751 1232 aa19.7■□□□□ 0.74
COG3-201ENST00000349995 CFTRP13569 1480 aa19.7■□□□□ 0.74
COG3-201ENST00000349995 KIF21BO75037 1637 aa19.69■□□□□ 0.74
COG3-201ENST00000349995 SLKQ9H2G2 1235 aaPredicted RBP19.68■□□□□ 0.74
COG3-201ENST00000349995 SPRYD3Q8NCJ5 442 aa19.68■□□□□ 0.74
COG3-201ENST00000349995 DHX57Q6P158 1386 aaKnown RBP19.67■□□□□ 0.74
COG3-201ENST00000349995 ZBTB7CA1YPR0 619 aa19.65■□□□□ 0.74
COG3-201ENST00000349995 NESP48681 1621 aa19.65■□□□□ 0.74
COG3-201ENST00000349995 MSNP26038 577 aaKnown RBP19.65■□□□□ 0.74
COG3-201ENST00000349995 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
COG3-201ENST00000349995 ARAP1Q96P48 1450 aa19.62■□□□□ 0.73
COG3-201ENST00000349995 GOLGA6L22H0YM25 854 aa19.62■□□□□ 0.73
COG3-201ENST00000349995 DNAJC5BQ9UF47 199 aa19.62■□□□□ 0.73
COG3-201ENST00000349995 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
COG3-201ENST00000349995 CUX1P39880 1505 aa19.6■□□□□ 0.73
COG3-201ENST00000349995 PPP1R15AO75807 674 aaPredicted RBP19.57■□□□□ 0.72
COG3-201ENST00000349995 GOLGA6L3A6NEY3 463 aa19.57■□□□□ 0.72
COG3-201ENST00000349995 CARD11Q9BXL7 1154 aa19.57■□□□□ 0.72
COG3-201ENST00000349995 PRXQ9BXM0 1461 aa19.56■□□□□ 0.72
COG3-201ENST00000349995 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
COG3-201ENST00000349995 JPH4Q96JJ6 628 aa19.56■□□□□ 0.72
COG3-201ENST00000349995 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
COG3-201ENST00000349995 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
COG3-201ENST00000349995 TOP2BQ02880 1626 aa19.54■□□□□ 0.72
COG3-201ENST00000349995 PHLDB1Q86UU1 1377 aa19.52■□□□□ 0.72
COG3-201ENST00000349995 PKD2Q13563 968 aa19.52■□□□□ 0.72
COG3-201ENST00000349995 HMGXB3Q12766 1538 aa19.52■□□□□ 0.71
COG3-201ENST00000349995 HSPA5P11021 654 aaKnown RBP19.51■□□□□ 0.71
COG3-201ENST00000349995 MYH16Q9H6N6 1097 aa19.51■□□□□ 0.71
COG3-201ENST00000349995 PDE4AP27815 886 aa19.51■□□□□ 0.71
COG3-201ENST00000349995 AQRO60306 1485 aaKnown RBP eCLIP19.51■□□□□ 0.719e-8■■■■■ 30.5
COG3-201ENST00000349995 TPRNQ4KMQ1 711 aa19.51■□□□□ 0.71
COG3-201ENST00000349995 DCAF11Q8TEB1 546 aa19.5■□□□□ 0.71
COG3-201ENST00000349995 CC2D2AQ9P2K1 1620 aa19.5■□□□□ 0.71
COG3-201ENST00000349995 FRAT1Q92837 279 aaPredicted RBP19.5■□□□□ 0.71
COG3-201ENST00000349995 CARMIL2Q6F5E8 1435 aa19.49■□□□□ 0.71
COG3-201ENST00000349995 PLPPR3Q6T4P5 718 aa19.49■□□□□ 0.71
COG3-201ENST00000349995 STAG3Q9UJ98 1225 aa19.49■□□□□ 0.71
COG3-201ENST00000349995 WDR43Q15061 677 aaKnown RBP eCLIP19.47■□□□□ 0.71
COG3-201ENST00000349995 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
COG3-201ENST00000349995 L3MBTL2Q969R5 705 aa19.47■□□□□ 0.71
COG3-201ENST00000349995 NFKBIBQ15653 356 aa19.46■□□□□ 0.71
COG3-201ENST00000349995 ERICH3Q5RHP9 1530 aa19.45■□□□□ 0.7
COG3-201ENST00000349995 ZMYND15Q9H091 742 aa19.45■□□□□ 0.7
COG3-201ENST00000349995 HNRNPMP52272 730 aaKnown RBP eCLIP19.44■□□□□ 0.76e-7■■■■□ 19.3
COG3-201ENST00000349995 FAM13BQ9NYF5 915 aa19.44■□□□□ 0.7
COG3-201ENST00000349995 ESF1Q9H501 851 aaKnown RBP19.41■□□□□ 0.7
COG3-201ENST00000349995 LRRC9Q6ZRR7 1453 aa19.41■□□□□ 0.7
COG3-201ENST00000349995 POLA1P09884 1462 aaPredicted RBP19.4■□□□□ 0.7
COG3-201ENST00000349995 ZNF644Q9H582 1327 aaPredicted RBP19.4■□□□□ 0.7
COG3-201ENST00000349995 NUP155O75694 1391 aa19.39■□□□□ 0.7
COG3-201ENST00000349995 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
COG3-201ENST00000349995 SLC24A1O60721 1099 aa19.39■□□□□ 0.69
COG3-201ENST00000349995 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
COG3-201ENST00000349995 HSP90AB1P08238 724 aaKnown RBP19.37■□□□□ 0.69
COG3-201ENST00000349995 CCDC18Q5T9S5 1454 aa19.35■□□□□ 0.69
COG3-201ENST00000349995 RCAN3Q9UKA8 241 aa19.35■□□□□ 0.69
COG3-201ENST00000349995 NUDCQ9Y266 331 aa19.35■□□□□ 0.69
COG3-201ENST00000349995 FAM43AQ8N2R8 423 aa19.35■□□□□ 0.69
COG3-201ENST00000349995 FGD6Q6ZV73 1430 aa19.34■□□□□ 0.69
COG3-201ENST00000349995 TNNT3P45378 269 aaPredicted RBP19.32■□□□□ 0.68
COG3-201ENST00000349995 HSCBQ8IWL3 235 aa19.32■□□□□ 0.68
COG3-201ENST00000349995 ANKRD30AQ9BXX3 1397 aa19.32■□□□□ 0.68
COG3-201ENST00000349995 RRBP1Q9P2E9 1410 aaKnown RBP19.3■□□□□ 0.68
COG3-201ENST00000349995 CASKIN1Q8WXD9 1431 aa19.29■□□□□ 0.68
COG3-201ENST00000349995 CHAF1AQ13111 956 aaPredicted RBP19.29■□□□□ 0.68
COG3-201ENST00000349995 CC2D1BQ5T0F9 858 aaKnown RBP19.29■□□□□ 0.68
COG3-201ENST00000349995 EXOC6Q8TAG9 804 aa19.28■□□□□ 0.68
COG3-201ENST00000349995 FRAT2O75474 233 aaPredicted RBP19.27■□□□□ 0.68
COG3-201ENST00000349995 EFCAB2Q5VUJ9 269 aa19.26■□□□□ 0.67
COG3-201ENST00000349995 KNSTRNQ9Y448 316 aa19.26■□□□□ 0.67
COG3-201ENST00000349995 MYOM3Q5VTT5 1437 aa19.26■□□□□ 0.67
COG3-201ENST00000349995 RRP9O43818 475 aaKnown RBP19.25■□□□□ 0.67
COG3-201ENST00000349995 NCOA2Q15596 1464 aa19.23■□□□□ 0.67
COG3-201ENST00000349995 PTPRGP23470 1445 aa19.23■□□□□ 0.67
COG3-201ENST00000349995 RBM10P98175 930 aaKnown RBP19.23■□□□□ 0.67
COG3-201ENST00000349995 GGT6Q6P531 493 aa19.22■□□□□ 0.67
COG3-201ENST00000349995 PLEKHG5O94827 1062 aa19.22■□□□□ 0.67
COG3-201ENST00000349995 GBP4Q96PP9 640 aa19.21■□□□□ 0.67
COG3-201ENST00000349995 KIAA2012Q0VF49 1180 aa19.19■□□□□ 0.66
COG3-201ENST00000349995 GRIN2BQ13224 1484 aa19.19■□□□□ 0.66
COG3-201ENST00000349995 NEUROD2Q15784 382 aa19.18■□□□□ 0.66
COG3-201ENST00000349995 DNMBPQ6XZF7 1577 aa19.18■□□□□ 0.66
COG3-201ENST00000349995 PLIN1O60240 522 aa19.17■□□□□ 0.66
COG3-201ENST00000349995 FYCO1Q9BQS8 1478 aa19.17■□□□□ 0.66
COG3-201ENST00000349995 KIF3BO15066 747 aa19.15■□□□□ 0.66
COG3-201ENST00000349995 TMF1P82094 1093 aa19.15■□□□□ 0.66
COG3-201ENST00000349995 FAM161AQ3B820 660 aa19.15■□□□□ 0.66
COG3-201ENST00000349995 CDCA8Q53HL2 280 aa19.15■□□□□ 0.66
COG3-201ENST00000349995 TIAM1Q13009 1591 aa19.14■□□□□ 0.66
COG3-201ENST00000349995 ZNF771Q7L3S4 317 aaPredicted RBP19.14■□□□□ 0.66
COG3-201ENST00000349995 ABCA10Q8WWZ4 1543 aa19.14■□□□□ 0.65
COG3-201ENST00000349995 FOXD4L1Q9NU39 408 aa19.14■□□□□ 0.65
COG3-201ENST00000349995 ROCK2O75116 1388 aaKnown RBP19.14■□□□□ 0.65
COG3-201ENST00000349995 MS4A1P11836 297 aa19.14■□□□□ 0.65
COG3-201ENST00000349995 UACAQ9BZF9 1416 aa19.13■□□□□ 0.65
COG3-201ENST00000349995 R3HCC1Q9Y3T6 440 aaKnown RBP19.13■□□□□ 0.65
COG3-201ENST00000349995 ZBED9Q6R2W3 1325 aa19.13■□□□□ 0.65
COG3-201ENST00000349995 ST20-MTHFSA0A0A6YYL1 179 aa19.12■□□□□ 0.65
COG3-201ENST00000349995 PDE4CQ08493 712 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms