RNA–Protein interactions for RNA: ENST00000349995.9

COG3-201, Transcript of component of oligomeric golgi complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COG3, Length 4,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG3-201ENST00000349995 NISCHQ9Y2I1 1504 aa27.06■■□□□ 1.92
COG3-201ENST00000349995 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
COG3-201ENST00000349995 PELP1Q8IZL8 1130 aaKnown RBP24.98■■□□□ 1.59
COG3-201ENST00000349995 SHROOM4Q9ULL8 1493 aa24.98■■□□□ 1.59
COG3-201ENST00000349995 SUPT5HO00267 1087 aaKnown RBP24.92■■□□□ 1.58
COG3-201ENST00000349995 MYT1Q01538 1121 aa24.52■■□□□ 1.52
COG3-201ENST00000349995 PCGF6Q9BYE7 350 aa24.38■■□□□ 1.49
COG3-201ENST00000349995 HRCP23327 699 aa23.92■■□□□ 1.42
COG3-201ENST00000349995 CENPBP07199 599 aaPredicted RBP23.77■■□□□ 1.4
COG3-201ENST00000349995 PPARGC1BQ86YN6 1023 aaKnown RBP23.72■■□□□ 1.39
COG3-201ENST00000349995 EHMT2Q96KQ7 1210 aa23.68■■□□□ 1.38
COG3-201ENST00000349995 ZEB1P37275 1124 aaPredicted RBP23.42■■□□□ 1.34
COG3-201ENST00000349995 YTHDC1Q96MU7 727 aaKnown RBP23.35■■□□□ 1.33
COG3-201ENST00000349995 FAM9AQ8IZU1 332 aaPredicted RBP23.35■■□□□ 1.33
COG3-201ENST00000349995 ERICH6Q7L0X2 663 aa23.24■■□□□ 1.31
COG3-201ENST00000349995 CCER1Q8TC90 406 aaPredicted RBP23.08■■□□□ 1.28
COG3-201ENST00000349995 TRIM41Q8WV44 630 aa23.01■■□□□ 1.27
COG3-201ENST00000349995 TTBK1Q5TCY1 1321 aaPredicted RBP22.99■■□□□ 1.27
COG3-201ENST00000349995 GTF3C3Q9Y5Q9 886 aa22.94■■□□□ 1.26
COG3-201ENST00000349995 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
COG3-201ENST00000349995 TRIM26Q12899 539 aaPredicted RBP22.87■■□□□ 1.25
COG3-201ENST00000349995 ABCC9O60706 1549 aa22.75■■□□□ 1.23
COG3-201ENST00000349995 LOC105371045A0A1W2PR82 267 aa22.71■■□□□ 1.23
COG3-201ENST00000349995 SCAF1Q9H7N4 1312 aaKnown RBP22.7■■□□□ 1.22
COG3-201ENST00000349995 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
COG3-201ENST00000349995 RANGAP1P46060 587 aaPredicted RBP22.58■■□□□ 1.21
COG3-201ENST00000349995 NEFLP07196 543 aa22.57■■□□□ 1.2
COG3-201ENST00000349995 ZCCHC6Q5VYS8 1495 aaKnown RBP22.54■■□□□ 1.2
COG3-201ENST00000349995 DIEXFQ68CQ4 756 aaKnown RBP22.54■■□□□ 1.2
COG3-201ENST00000349995 APLP2Q06481 763 aa22.46■■□□□ 1.19
COG3-201ENST00000349995 UBTFP17480 764 aaKnown RBP22.42■■□□□ 1.18
COG3-201ENST00000349995 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
COG3-201ENST00000349995 NEUROD1Q13562 356 aa22.31■■□□□ 1.16
COG3-201ENST00000349995 CCDC180Q9P1Z9 1646 aa22.29■■□□□ 1.16
COG3-201ENST00000349995 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.29■■□□□ 1.16
COG3-201ENST00000349995 BCANQ96GW7 911 aa22.18■■□□□ 1.14
COG3-201ENST00000349995 SCRIBQ14160 1630 aa22.08■■□□□ 1.12
COG3-201ENST00000349995 BCL11AQ9H165 835 aa22.02■■□□□ 1.12
COG3-201ENST00000349995 ATP1B4Q9UN42 357 aaPredicted RBP22.01■■□□□ 1.11
COG3-201ENST00000349995 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
COG3-201ENST00000349995 EIF5BO60841 1220 aaKnown RBP21.81■■□□□ 1.08
COG3-201ENST00000349995 ANP32EQ9BTT0 268 aa21.78■■□□□ 1.08
COG3-201ENST00000349995 HNRNPUL2Q1KMD3 747 aaKnown RBP21.74■■□□□ 1.07
COG3-201ENST00000349995 ZNF316A6NFI3 1004 aaPredicted RBP21.72■■□□□ 1.07
COG3-201ENST00000349995 MYO15BQ96JP2 1530 aa21.67■■□□□ 1.06
COG3-201ENST00000349995 DAXXQ9UER7 740 aaPredicted RBP21.65■■□□□ 1.06
COG3-201ENST00000349995 RSF1Q96T23 1441 aaPredicted RBP21.64■■□□□ 1.05
COG3-201ENST00000349995 ITGAEP38570 1179 aa21.63■■□□□ 1.05
COG3-201ENST00000349995 CDK11AQ9UQ88 783 aaPredicted RBP21.59■■□□□ 1.05
COG3-201ENST00000349995 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
COG3-201ENST00000349995 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
COG3-201ENST00000349995 FKBP8Q14318 412 aa21.49■■□□□ 1.03
COG3-201ENST00000349995 NBR1Q14596 966 aa21.42■■□□□ 1.02
COG3-201ENST00000349995 CECR2Q9BXF3 1484 aa21.41■■□□□ 1.02
COG3-201ENST00000349995 NACADO15069 1562 aa21.38■■□□□ 1.01
COG3-201ENST00000349995 RB1CC1Q8TDY2 1594 aa21.37■■□□□ 1.01
COG3-201ENST00000349995 MIER1Q8N108 512 aa21.37■■□□□ 1.01
COG3-201ENST00000349995 CNGB1Q14028 1251 aaPredicted RBP21.35■■□□□ 1.01
COG3-201ENST00000349995 CLSPNQ9HAW4 1339 aa21.32■■□□□ 1
COG3-201ENST00000349995 MYT1LQ9UL68 1186 aa21.29■■□□□ 1
COG3-201ENST00000349995 RTN4Q9NQC3 1192 aaKnown RBP21.21■□□□□ 0.99
COG3-201ENST00000349995 GLIPR1L2Q4G1C9 344 aa21.19■□□□□ 0.98
COG3-201ENST00000349995 ANP32AP39687 249 aaKnown RBP21.17■□□□□ 0.98
COG3-201ENST00000349995 P3H3Q8IVL6 736 aa21.15■□□□□ 0.98
COG3-201ENST00000349995 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
COG3-201ENST00000349995 FAM50AQ14320 339 aaKnown RBP21.12■□□□□ 0.97
COG3-201ENST00000349995 POLR3GLQ9BT43 218 aa21.11■□□□□ 0.97
COG3-201ENST00000349995 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
COG3-201ENST00000349995 SUPT16HQ9Y5B9 1047 aaKnown RBP21.08■□□□□ 0.97
COG3-201ENST00000349995 ANP32CO43423 234 aa21.05■□□□□ 0.96
COG3-201ENST00000349995 PRKCSHP14314 528 aaPredicted RBP21.02■□□□□ 0.96
COG3-201ENST00000349995 BAZ1AQ9NRL2 1556 aaPredicted RBP21.01■□□□□ 0.95
COG3-201ENST00000349995 TRIM52Q96A61 297 aa20.99■□□□□ 0.95
COG3-201ENST00000349995 DEKP35659 375 aaKnown RBP20.96■□□□□ 0.95
COG3-201ENST00000349995 IRX6P78412 446 aaPredicted RBP20.96■□□□□ 0.95
COG3-201ENST00000349995 TSHZ2Q9NRE2 1034 aa20.94■□□□□ 0.94
COG3-201ENST00000349995 ZBTB47Q9UFB7 747 aaPredicted RBP20.94■□□□□ 0.94
COG3-201ENST00000349995 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.92■□□□□ 0.94
COG3-201ENST00000349995 ARID3CA6NKF2 412 aa20.91■□□□□ 0.94
COG3-201ENST00000349995 WRNQ14191 1432 aaPredicted RBP eCLIP20.9■□□□□ 0.94
COG3-201ENST00000349995 BAZ1BQ9UIG0 1483 aaKnown RBP20.88■□□□□ 0.93
COG3-201ENST00000349995 FBLN2P98095 1184 aa20.88■□□□□ 0.93
COG3-201ENST00000349995 RBM19Q9Y4C8 960 aaKnown RBP20.87■□□□□ 0.93
COG3-201ENST00000349995 CCDC136Q96JN2 1154 aa20.87■□□□□ 0.93
COG3-201ENST00000349995 CEP162Q5TB80 1403 aa20.83■□□□□ 0.93
COG3-201ENST00000349995 WIZO95785 1651 aa20.82■□□□□ 0.92
COG3-201ENST00000349995 SOGA1O94964 1423 aa20.81■□□□□ 0.92
COG3-201ENST00000349995 DDX10Q13206 875 aaKnown RBP20.81■□□□□ 0.92
COG3-201ENST00000349995 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
COG3-201ENST00000349995 HNRNPUQ00839 825 aaKnown RBP eCLIP20.8■□□□□ 0.92
COG3-201ENST00000349995 CLIP1P30622 1438 aa20.79■□□□□ 0.92
COG3-201ENST00000349995 ABCC8Q09428 1581 aa20.76■□□□□ 0.91
COG3-201ENST00000349995 ARXQ96QS3 562 aa20.76■□□□□ 0.91
COG3-201ENST00000349995 EEA1Q15075 1411 aa20.71■□□□□ 0.91
COG3-201ENST00000349995 GOLGA3Q08378 1498 aa20.7■□□□□ 0.9
COG3-201ENST00000349995 TNIKQ9UKE5 1360 aa20.68■□□□□ 0.9
COG3-201ENST00000349995 NEFMP07197 916 aa20.66■□□□□ 0.9
COG3-201ENST00000349995 NOP58Q9Y2X3 529 aaKnown RBP20.61■□□□□ 0.89
COG3-201ENST00000349995 ANO8Q9HCE9 1232 aaPredicted RBP20.59■□□□□ 0.89
COG3-201ENST00000349995 LAS1LQ9Y4W2 734 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms