RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 ApobE9Q414 4505 aa7.96□□□□□ -1.13
Pdlim5-208ENSMUST00000196220 Igkv3-3A0A140T8Q0 119 aa7.95□□□□□ -1.14
Pdlim5-208ENSMUST00000196220 SnurfQ9WU12 71 aa7.95□□□□□ -1.14
Pdlim5-208ENSMUST00000196220 1700074P13RikQ9D9G7 251 aa7.92□□□□□ -1.14
Pdlim5-208ENSMUST00000196220 Hectd4E9Q2E4 4418 aa7.91□□□□□ -1.14
Pdlim5-208ENSMUST00000196220 Anapc11Q9CPX9 84 aa7.91□□□□□ -1.14
Pdlim5-208ENSMUST00000196220 Pkd1O08852 4293 aa7.91□□□□□ -1.14
Pdlim5-208ENSMUST00000196220 Brk1Q91VR8 75 aa7.89□□□□□ -1.15
Pdlim5-208ENSMUST00000196220 Krtap10-4Q08EG8 221 aa7.88□□□□□ -1.15
Pdlim5-208ENSMUST00000196220 H2al1aQ5M8Q2 105 aa7.87□□□□□ -1.15
Pdlim5-208ENSMUST00000196220 Cdc42se1Q8BHL7 80 aa7.86□□□□□ -1.15
Pdlim5-208ENSMUST00000196220 Krtap13O88375 197 aa7.84□□□□□ -1.15
Pdlim5-208ENSMUST00000196220 Coa5Q99M07 74 aa7.84□□□□□ -1.15
Pdlim5-208ENSMUST00000196220 Dync1h1Q9JHU4 4644 aaKnown RBP7.79□□□□□ -1.16
Pdlim5-208ENSMUST00000196220 Lrp1bQ9JI18 4599 aa7.79□□□□□ -1.16
Pdlim5-208ENSMUST00000196220 Cypt15B1AXS0 87 aa7.78□□□□□ -1.16
Pdlim5-208ENSMUST00000196220 Defb12Q8K4N3 78 aa7.78□□□□□ -1.16
Pdlim5-208ENSMUST00000196220 Chtf8P0CG14 533 aa7.78□□□□□ -1.16
Pdlim5-208ENSMUST00000196220 Gm10267M0QWD8 85 aa7.76□□□□□ -1.17
Pdlim5-208ENSMUST00000196220 A530084C06RikQ3UTW2 186 aa7.75□□□□□ -1.17
Pdlim5-208ENSMUST00000196220 Dph3Q8K0W9 82 aa7.75□□□□□ -1.17
Pdlim5-208ENSMUST00000196220 Spaca4Q80ZQ0 127 aa7.74□□□□□ -1.17
Pdlim5-208ENSMUST00000196220 Stard9Q80TF6 4561 aa7.74□□□□□ -1.17
Pdlim5-208ENSMUST00000196220 Gm10160F6Y577 67 aa7.73□□□□□ -1.17
Pdlim5-208ENSMUST00000196220 Mrpl55Q9CZ83 127 aa7.73□□□□□ -1.17
Pdlim5-208ENSMUST00000196220 Fat1A0A1L1SQU7 4645 aa7.72□□□□□ -1.17
Pdlim5-208ENSMUST00000196220 Gm10197F6QEY5 67 aa7.7□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Wfdc3Q14AE4 130 aa7.7□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Gm10643Q3URG9 111 aa7.7□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Defb13Q8R2I4 64 aa7.7□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Gm2696A0A1W2P709 240 aa7.68□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Pkhd1E9PZ36 4059 aa7.68□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 SacsQ9JLC8 4582 aa7.67□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Rps29P62274 56 aa7.66□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Krtap10-10A0A1W2P7T6 217 aa7.66□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Fat2Q5F226 4351 aa7.65□□□□□ -1.18
Pdlim5-208ENSMUST00000196220 Phxr4P15974 95 aa7.63□□□□□ -1.19
Pdlim5-208ENSMUST00000196220 Gm10337F7DEP7 55 aa7.61□□□□□ -1.19
Pdlim5-208ENSMUST00000196220 Pkhd1l1Q80ZA4 4249 aa7.57□□□□□ -1.2
Pdlim5-208ENSMUST00000196220 H2al1bA0A087WP11 105 aa7.56□□□□□ -1.2
Pdlim5-208ENSMUST00000196220 H2al1kJ3QP08 105 aa7.56□□□□□ -1.2
Pdlim5-208ENSMUST00000196220 H2al1eQ810S6 105 aa7.56□□□□□ -1.2
Pdlim5-208ENSMUST00000196220 H2al1mQ9DAD9 105 aa7.56□□□□□ -1.2
Pdlim5-208ENSMUST00000196220 Ryr3A2AGL3 4863 aa7.53□□□□□ -1.2
Pdlim5-208ENSMUST00000196220 Sox16Q62247 57 aa7.53□□□□□ -1.2
Pdlim5-208ENSMUST00000196220 Defb38Q7TNV7 63 aa7.52□□□□□ -1.2
Pdlim5-208ENSMUST00000196220 Gm21798J3QNU5 87 aa7.52□□□□□ -1.21
Pdlim5-208ENSMUST00000196220 Gm26620Q9CY65 116 aa7.52□□□□□ -1.21
Pdlim5-208ENSMUST00000196220 RetnlbQ99P86 105 aa7.48□□□□□ -1.21
Pdlim5-208ENSMUST00000196220 Gm20661K7N787 53 aa7.47□□□□□ -1.21
Pdlim5-208ENSMUST00000196220 Ryr2E9Q401 4966 aaKnown RBP7.45□□□□□ -1.22
Pdlim5-208ENSMUST00000196220 Krtap3-2Q9D638 99 aa7.45□□□□□ -1.22
Pdlim5-208ENSMUST00000196220 Krtap3-3Q9D7P0 99 aa7.45□□□□□ -1.22
Pdlim5-208ENSMUST00000196220 Ndufb1P0DN34 57 aa7.44□□□□□ -1.22
Pdlim5-208ENSMUST00000196220 A930033H14RikG5E8X6 103 aa7.43□□□□□ -1.22
Pdlim5-208ENSMUST00000196220 Gm10999F6Q4M4 69 aa7.42□□□□□ -1.22
Pdlim5-208ENSMUST00000196220 Vps13bQ80TY5 3993 aa7.41□□□□□ -1.22
Pdlim5-208ENSMUST00000196220 Limd2Q8BGB5 128 aa7.41□□□□□ -1.22
Pdlim5-208ENSMUST00000196220 Gm11939A2A592 99 aa7.39□□□□□ -1.23
Pdlim5-208ENSMUST00000196220 Q8BGJ3 129 aa7.39□□□□□ -1.23
Pdlim5-208ENSMUST00000196220 Uqcr11Q9CPX8 56 aa7.39□□□□□ -1.23
Pdlim5-208ENSMUST00000196220 2310034C09RikQ9D746 214 aa7.38□□□□□ -1.23
Pdlim5-208ENSMUST00000196220 4933415A04RikQ9D443 101 aa7.37□□□□□ -1.23
Pdlim5-208ENSMUST00000196220 2310079G19RikQ9D6L6 185 aa7.37□□□□□ -1.23
Pdlim5-208ENSMUST00000196220 4930507D05RikQ8C9C9 103 aa7.35□□□□□ -1.23
Pdlim5-208ENSMUST00000196220 Krtap19-5O08632 62 aa7.3□□□□□ -1.24
Pdlim5-208ENSMUST00000196220 Gm4491E0CX42 125 aa7.29□□□□□ -1.24
Pdlim5-208ENSMUST00000196220 Dnah8Q91XQ0 4731 aa7.28□□□□□ -1.24
Pdlim5-208ENSMUST00000196220 Fat3Q8BNA6 4555 aa7.28□□□□□ -1.24
Pdlim5-208ENSMUST00000196220 SptssbQ925E8 76 aa7.28□□□□□ -1.24
Pdlim5-208ENSMUST00000196220 Gm5767A0A0J9YTU8 78 aa7.27□□□□□ -1.25
Pdlim5-208ENSMUST00000196220 Ryr1E9PZQ0 5035 aa7.26□□□□□ -1.25
Pdlim5-208ENSMUST00000196220 Kmt2cQ8BRH4 4903 aa7.26□□□□□ -1.25
Pdlim5-208ENSMUST00000196220 Lrp1Q91ZX7 4545 aaKnown RBP7.24□□□□□ -1.25
Pdlim5-208ENSMUST00000196220 D6Ertd527eA0A0N4SWI3 464 aa7.23□□□□□ -1.25
Pdlim5-208ENSMUST00000196220 9230102O04RikA2ASX7 82 aa7.21□□□□□ -1.25
Pdlim5-208ENSMUST00000196220 Defb1P56386 69 aa7.12□□□□□ -1.27
Pdlim5-208ENSMUST00000196220 Dnhd1D3Z2X2 4750 aa7.07□□□□□ -1.28
Pdlim5-208ENSMUST00000196220 Rpl37Q9D823 97 aa7.07□□□□□ -1.28
Pdlim5-208ENSMUST00000196220 Cox6b2Q80ZN9 88 aa7.04□□□□□ -1.28
Pdlim5-208ENSMUST00000196220 Gm3646F6S692 53 aa7.03□□□□□ -1.28
Pdlim5-208ENSMUST00000196220 Rnase13Q5GAM7 153 aa7.03□□□□□ -1.28
Pdlim5-208ENSMUST00000196220 Gm9736A0A1W2P7N1 277 aa7.02□□□□□ -1.29
Pdlim5-208ENSMUST00000196220 Gm5965D3Z724 196 aa7□□□□□ -1.29
Pdlim5-208ENSMUST00000196220 Sec61gP60060 68 aa6.99□□□□□ -1.29
Pdlim5-208ENSMUST00000196220 Mycbp2Q7TPH6 4711 aa6.99□□□□□ -1.29
Pdlim5-208ENSMUST00000196220 Abca13Q5SSE9 5034 aa6.98□□□□□ -1.29
Pdlim5-208ENSMUST00000196220 Gm17416Q30KP4 66 aa6.97□□□□□ -1.29
Pdlim5-208ENSMUST00000196220 Krtap15-1Q9QZU5 150 aa6.97□□□□□ -1.29
Pdlim5-208ENSMUST00000196220 Gm9821Q8K076 103 aa6.93□□□□□ -1.3
Pdlim5-208ENSMUST00000196220 Birc6O88738 4882 aa6.9□□□□□ -1.31
Pdlim5-208ENSMUST00000196220 Herc2Q4U2R1 4836 aa6.89□□□□□ -1.31
Pdlim5-208ENSMUST00000196220 Ndufs5Q99LY9 106 aa6.88□□□□□ -1.31
Pdlim5-208ENSMUST00000196220 1700042G07RikB1AUF7 90 aa6.82□□□□□ -1.32
Pdlim5-208ENSMUST00000196220 Gm17606F6ZL36 78 aa6.82□□□□□ -1.32
Pdlim5-208ENSMUST00000196220 Kiaa1109A2AAE1 5005 aa6.82□□□□□ -1.32
Pdlim5-208ENSMUST00000196220 Pla2g10Q9QXX3 151 aa6.79□□□□□ -1.32
Pdlim5-208ENSMUST00000196220 2210017I01RikA0A0A6YVV1 95 aa6.76□□□□□ -1.33
Pdlim5-208ENSMUST00000196220 Gm9955Q8CEJ8 102 aa6.76□□□□□ -1.33
Pdlim5-208ENSMUST00000196220 Gm20537G3UYK7 97 aa6.73□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 28.9 ms