Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Gm25239-201ENSMUST00000174915 86 ntBASIC26.37■■□□□ 1.81
Pkd1O08852 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Pkd1O08852 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pkd1O08852 Gm24109-201ENSMUST00000175489 103 ntBASIC23.06■■□□□ 1.28
Pkd1O08852 Gm15042-201ENSMUST00000120212 883 ntBASIC22.6■■□□□ 1.21
Pkd1O08852 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
Pkd1O08852 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pkd1O08852 Gm15045-201ENSMUST00000117359 883 ntBASIC22.21■■□□□ 1.15
Pkd1O08852 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pkd1O08852 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pkd1O08852 Gm23366-201ENSMUST00000175022 89 ntBASIC21.79■■□□□ 1.08
Pkd1O08852 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.52■■□□□ 1.04
Pkd1O08852 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.52■■□□□ 1.04
Pkd1O08852 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Pkd1O08852 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Pkd1O08852 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pkd1O08852 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pkd1O08852 Gm25238-201ENSMUST00000174914 89 ntBASIC20.98■□□□□ 0.95
Pkd1O08852 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pkd1O08852 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pkd1O08852 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.84■□□□□ 0.93
Pkd1O08852 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pkd1O08852 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pkd1O08852 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Pkd1O08852 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pkd1O08852 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pkd1O08852 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Pkd1O08852 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pkd1O08852 Gm25262-201ENSMUST00000174934 133 ntBASIC20.17■□□□□ 0.82
Pkd1O08852 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pkd1O08852 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC20.15■□□□□ 0.82
Pkd1O08852 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.07■□□□□ 0.8
Pkd1O08852 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pkd1O08852 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC20.06■□□□□ 0.8
Pkd1O08852 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pkd1O08852 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pkd1O08852 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pkd1O08852 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Pkd1O08852 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.88■□□□□ 0.77
Pkd1O08852 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.85■□□□□ 0.77
Pkd1O08852 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.85■□□□□ 0.77
Pkd1O08852 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
Pkd1O08852 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Pkd1O08852 Gm27325-201ENSMUST00000175467 74 ntBASIC19.83■□□□□ 0.76
Pkd1O08852 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Pkd1O08852 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.8■□□□□ 0.76
Pkd1O08852 Gm26115-201ENSMUST00000175605 87 ntBASIC19.79■□□□□ 0.76
Pkd1O08852 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Pkd1O08852 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.73■□□□□ 0.75
Pkd1O08852 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pkd1O08852 Rab21-202ENSMUST00000218831 843 ntBASIC19.65■□□□□ 0.74
Pkd1O08852 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pkd1O08852 Gm8109-201ENSMUST00000194076 746 ntBASIC19.61■□□□□ 0.73
Pkd1O08852 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pkd1O08852 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pkd1O08852 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pkd1O08852 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.49■□□□□ 0.71
Pkd1O08852 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pkd1O08852 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC19.4■□□□□ 0.7
Pkd1O08852 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.39■□□□□ 0.69
Pkd1O08852 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pkd1O08852 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pkd1O08852 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pkd1O08852 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pkd1O08852 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pkd1O08852 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.2■□□□□ 0.66
Pkd1O08852 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Pkd1O08852 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC19.13■□□□□ 0.65
Pkd1O08852 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC19.11■□□□□ 0.65
Pkd1O08852 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Pkd1O08852 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.1■□□□□ 0.65
Pkd1O08852 Gm24804-201ENSMUST00000174982 85 ntBASIC19.1■□□□□ 0.65
Pkd1O08852 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pkd1O08852 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Pkd1O08852 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pkd1O08852 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pkd1O08852 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pkd1O08852 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkd1O08852 Psd-208ENSMUST00000224556 2034 ntBASIC18.83■□□□□ 0.61
Pkd1O08852 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pkd1O08852 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.83■□□□□ 0.6
Pkd1O08852 Gm27322-201ENSMUST00000184007 104 ntBASIC18.82■□□□□ 0.6
Pkd1O08852 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1O08852 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pkd1O08852 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.8■□□□□ 0.6
Pkd1O08852 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.8■□□□□ 0.6
Pkd1O08852 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.8■□□□□ 0.6
Pkd1O08852 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.79■□□□□ 0.6
Pkd1O08852 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pkd1O08852 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.78■□□□□ 0.6
Pkd1O08852 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Pkd1O08852 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.75■□□□□ 0.59
Pkd1O08852 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.74■□□□□ 0.59
Pkd1O08852 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pkd1O08852 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pkd1O08852 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pkd1O08852 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pkd1O08852 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pkd1O08852 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.69■□□□□ 0.58
Pkd1O08852 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms