Protein–RNA interactions for Protein: A0A1L1SQU7

Fat1, FAT atypical cadherin 1, mousemouse

Predictions only

Length 4,645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fat1A0A1L1SQU7 Gm25239-201ENSMUST00000174915 86 ntBASIC25.75■■□□□ 1.71
Fat1A0A1L1SQU7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Fat1A0A1L1SQU7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Fat1A0A1L1SQU7 Gm24109-201ENSMUST00000175489 103 ntBASIC22.58■■□□□ 1.21
Fat1A0A1L1SQU7 Gm15042-201ENSMUST00000120212 883 ntBASIC22.01■■□□□ 1.11
Fat1A0A1L1SQU7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Fat1A0A1L1SQU7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Fat1A0A1L1SQU7 Gm15045-201ENSMUST00000117359 883 ntBASIC21.65■■□□□ 1.06
Fat1A0A1L1SQU7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Fat1A0A1L1SQU7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Fat1A0A1L1SQU7 Gm23366-201ENSMUST00000175022 89 ntBASIC21.24■□□□□ 0.99
Fat1A0A1L1SQU7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC21.1■□□□□ 0.97
Fat1A0A1L1SQU7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC21.03■□□□□ 0.96
Fat1A0A1L1SQU7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Fat1A0A1L1SQU7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Fat1A0A1L1SQU7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
Fat1A0A1L1SQU7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Fat1A0A1L1SQU7 Gm25238-201ENSMUST00000174914 89 ntBASIC20.5■□□□□ 0.87
Fat1A0A1L1SQU7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Fat1A0A1L1SQU7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Fat1A0A1L1SQU7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.38■□□□□ 0.85
Fat1A0A1L1SQU7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Fat1A0A1L1SQU7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Fat1A0A1L1SQU7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Fat1A0A1L1SQU7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Fat1A0A1L1SQU7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Fat1A0A1L1SQU7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Fat1A0A1L1SQU7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Fat1A0A1L1SQU7 Gm25262-201ENSMUST00000174934 133 ntBASIC19.75■□□□□ 0.75
Fat1A0A1L1SQU7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.68■□□□□ 0.74
Fat1A0A1L1SQU7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Fat1A0A1L1SQU7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC19.63■□□□□ 0.73
Fat1A0A1L1SQU7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Fat1A0A1L1SQU7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Fat1A0A1L1SQU7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.58■□□□□ 0.72
Fat1A0A1L1SQU7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Fat1A0A1L1SQU7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fat1A0A1L1SQU7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Fat1A0A1L1SQU7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC19.45■□□□□ 0.7
Fat1A0A1L1SQU7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Fat1A0A1L1SQU7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Fat1A0A1L1SQU7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC19.37■□□□□ 0.69
Fat1A0A1L1SQU7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.37■□□□□ 0.69
Fat1A0A1L1SQU7 Gm26115-201ENSMUST00000175605 87 ntBASIC19.36■□□□□ 0.69
Fat1A0A1L1SQU7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC19.36■□□□□ 0.69
Fat1A0A1L1SQU7 Gm27325-201ENSMUST00000175467 74 ntBASIC19.31■□□□□ 0.68
Fat1A0A1L1SQU7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.31■□□□□ 0.68
Fat1A0A1L1SQU7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Fat1A0A1L1SQU7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.26■□□□□ 0.67
Fat1A0A1L1SQU7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Fat1A0A1L1SQU7 Rab21-202ENSMUST00000218831 843 ntBASIC19.17■□□□□ 0.66
Fat1A0A1L1SQU7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Fat1A0A1L1SQU7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Fat1A0A1L1SQU7 Gm8109-201ENSMUST00000194076 746 ntBASIC19.12■□□□□ 0.65
Fat1A0A1L1SQU7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Fat1A0A1L1SQU7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Fat1A0A1L1SQU7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.03■□□□□ 0.64
Fat1A0A1L1SQU7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Fat1A0A1L1SQU7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.98■□□□□ 0.63
Fat1A0A1L1SQU7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.96■□□□□ 0.63
Fat1A0A1L1SQU7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Fat1A0A1L1SQU7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Fat1A0A1L1SQU7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Fat1A0A1L1SQU7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Fat1A0A1L1SQU7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.79■□□□□ 0.6
Fat1A0A1L1SQU7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Fat1A0A1L1SQU7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Fat1A0A1L1SQU7 Gm24804-201ENSMUST00000174982 85 ntBASIC18.7■□□□□ 0.58
Fat1A0A1L1SQU7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Fat1A0A1L1SQU7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC18.66■□□□□ 0.58
Fat1A0A1L1SQU7 Gm17082-201ENSMUST00000166043 1091 ntBASIC18.63■□□□□ 0.57
Fat1A0A1L1SQU7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fat1A0A1L1SQU7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.63■□□□□ 0.57
Fat1A0A1L1SQU7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Fat1A0A1L1SQU7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Fat1A0A1L1SQU7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Fat1A0A1L1SQU7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Fat1A0A1L1SQU7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Fat1A0A1L1SQU7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.43■□□□□ 0.54
Fat1A0A1L1SQU7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Fat1A0A1L1SQU7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC18.4■□□□□ 0.54
Fat1A0A1L1SQU7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fat1A0A1L1SQU7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Fat1A0A1L1SQU7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC18.39■□□□□ 0.53
Fat1A0A1L1SQU7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Fat1A0A1L1SQU7 Gm27322-201ENSMUST00000184007 104 ntBASIC18.38■□□□□ 0.53
Fat1A0A1L1SQU7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.37■□□□□ 0.53
Fat1A0A1L1SQU7 Psd-208ENSMUST00000224556 2034 ntBASIC18.36■□□□□ 0.53
Fat1A0A1L1SQU7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Fat1A0A1L1SQU7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.35■□□□□ 0.53
Fat1A0A1L1SQU7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Fat1A0A1L1SQU7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.33■□□□□ 0.52
Fat1A0A1L1SQU7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.32■□□□□ 0.52
Fat1A0A1L1SQU7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.32■□□□□ 0.52
Fat1A0A1L1SQU7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Fat1A0A1L1SQU7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Fat1A0A1L1SQU7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Fat1A0A1L1SQU7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Fat1A0A1L1SQU7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Fat1A0A1L1SQU7 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms