Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Gm25239-201ENSMUST00000174915 86 ntBASIC24.51■■□□□ 1.51
Pkhd1l1Q80ZA4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Pkhd1l1Q80ZA4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pkhd1l1Q80ZA4 Gm24109-201ENSMUST00000175489 103 ntBASIC21.45■■□□□ 1.02
Pkhd1l1Q80ZA4 Gm15042-201ENSMUST00000120212 883 ntBASIC21.09■□□□□ 0.97
Pkhd1l1Q80ZA4 Gm15045-201ENSMUST00000117359 883 ntBASIC20.84■□□□□ 0.93
Pkhd1l1Q80ZA4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pkhd1l1Q80ZA4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pkhd1l1Q80ZA4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pkhd1l1Q80ZA4 Gm23366-201ENSMUST00000175022 89 ntBASIC20.23■□□□□ 0.83
Pkhd1l1Q80ZA4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pkhd1l1Q80ZA4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC19.96■□□□□ 0.79
Pkhd1l1Q80ZA4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC19.96■□□□□ 0.79
Pkhd1l1Q80ZA4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Pkhd1l1Q80ZA4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pkhd1l1Q80ZA4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Pkhd1l1Q80ZA4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pkhd1l1Q80ZA4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pkhd1l1Q80ZA4 Gm25238-201ENSMUST00000174914 89 ntBASIC19.5■□□□□ 0.71
Pkhd1l1Q80ZA4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pkhd1l1Q80ZA4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Pkhd1l1Q80ZA4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.32■□□□□ 0.68
Pkhd1l1Q80ZA4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pkhd1l1Q80ZA4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pkhd1l1Q80ZA4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Pkhd1l1Q80ZA4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Pkhd1l1Q80ZA4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Pkhd1l1Q80ZA4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC18.89■□□□□ 0.61
Pkhd1l1Q80ZA4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pkhd1l1Q80ZA4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Pkhd1l1Q80ZA4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pkhd1l1Q80ZA4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Pkhd1l1Q80ZA4 Gm25262-201ENSMUST00000174934 133 ntBASIC18.77■□□□□ 0.6
Pkhd1l1Q80ZA4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pkhd1l1Q80ZA4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pkhd1l1Q80ZA4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pkhd1l1Q80ZA4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.69■□□□□ 0.58
Pkhd1l1Q80ZA4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.68■□□□□ 0.58
Pkhd1l1Q80ZA4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Pkhd1l1Q80ZA4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.64■□□□□ 0.57
Pkhd1l1Q80ZA4 Gm27325-201ENSMUST00000175467 74 ntBASIC18.54■□□□□ 0.56
Pkhd1l1Q80ZA4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pkhd1l1Q80ZA4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Pkhd1l1Q80ZA4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC18.42■□□□□ 0.54
Pkhd1l1Q80ZA4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.41■□□□□ 0.54
Pkhd1l1Q80ZA4 Gm26115-201ENSMUST00000175605 87 ntBASIC18.39■□□□□ 0.53
Pkhd1l1Q80ZA4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC18.38■□□□□ 0.53
Pkhd1l1Q80ZA4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.35■□□□□ 0.53
Pkhd1l1Q80ZA4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pkhd1l1Q80ZA4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
Pkhd1l1Q80ZA4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pkhd1l1Q80ZA4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pkhd1l1Q80ZA4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pkhd1l1Q80ZA4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pkhd1l1Q80ZA4 Rab21-202ENSMUST00000218831 843 ntBASIC18.25■□□□□ 0.51
Pkhd1l1Q80ZA4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Pkhd1l1Q80ZA4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.19■□□□□ 0.5
Pkhd1l1Q80ZA4 Gm8109-201ENSMUST00000194076 746 ntBASIC18.19■□□□□ 0.5
Pkhd1l1Q80ZA4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pkhd1l1Q80ZA4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pkhd1l1Q80ZA4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pkhd1l1Q80ZA4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC18.05■□□□□ 0.48
Pkhd1l1Q80ZA4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.03■□□□□ 0.48
Pkhd1l1Q80ZA4 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.02■□□□□ 0.48
Pkhd1l1Q80ZA4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pkhd1l1Q80ZA4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC17.99■□□□□ 0.47
Pkhd1l1Q80ZA4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC17.86■□□□□ 0.45
Pkhd1l1Q80ZA4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pkhd1l1Q80ZA4 Psd-208ENSMUST00000224556 2034 ntBASIC17.78■□□□□ 0.44
Pkhd1l1Q80ZA4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pkhd1l1Q80ZA4 Gm17082-201ENSMUST00000166043 1091 ntBASIC17.77■□□□□ 0.43
Pkhd1l1Q80ZA4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkhd1l1Q80ZA4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Pkhd1l1Q80ZA4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pkhd1l1Q80ZA4 Gm24804-201ENSMUST00000174982 85 ntBASIC17.76■□□□□ 0.43
Pkhd1l1Q80ZA4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC17.74■□□□□ 0.43
Pkhd1l1Q80ZA4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pkhd1l1Q80ZA4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pkhd1l1Q80ZA4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pkhd1l1Q80ZA4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC17.71■□□□□ 0.43
Pkhd1l1Q80ZA4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pkhd1l1Q80ZA4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pkhd1l1Q80ZA4 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC17.68■□□□□ 0.42
Pkhd1l1Q80ZA4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
Pkhd1l1Q80ZA4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pkhd1l1Q80ZA4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC17.58■□□□□ 0.4
Pkhd1l1Q80ZA4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC17.55■□□□□ 0.4
Pkhd1l1Q80ZA4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC17.53■□□□□ 0.4
Pkhd1l1Q80ZA4 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pkhd1l1Q80ZA4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pkhd1l1Q80ZA4 Gm27322-201ENSMUST00000184007 104 ntBASIC17.46■□□□□ 0.39
Pkhd1l1Q80ZA4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC17.45■□□□□ 0.38
Pkhd1l1Q80ZA4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pkhd1l1Q80ZA4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Pkhd1l1Q80ZA4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Pkhd1l1Q80ZA4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.39■□□□□ 0.38
Pkhd1l1Q80ZA4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pkhd1l1Q80ZA4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pkhd1l1Q80ZA4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pkhd1l1Q80ZA4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 15.4 ms