Protein–RNA interactions for Protein: J3QP08

H2al1k, Histone H2A, mousemouse

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2al1kJ3QP08 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
H2al1kJ3QP08 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H2al1kJ3QP08 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
H2al1kJ3QP08 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
H2al1kJ3QP08 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
H2al1kJ3QP08 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
H2al1kJ3QP08 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
H2al1kJ3QP08 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
H2al1kJ3QP08 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2al1kJ3QP08 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
H2al1kJ3QP08 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
H2al1kJ3QP08 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2al1kJ3QP08 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
H2al1kJ3QP08 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
H2al1kJ3QP08 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
H2al1kJ3QP08 Psd-208ENSMUST00000224556 2034 ntBASIC17.67■□□□□ 0.42
H2al1kJ3QP08 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
H2al1kJ3QP08 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
H2al1kJ3QP08 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC17.56■□□□□ 0.4
H2al1kJ3QP08 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
H2al1kJ3QP08 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
H2al1kJ3QP08 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
H2al1kJ3QP08 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
H2al1kJ3QP08 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
H2al1kJ3QP08 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
H2al1kJ3QP08 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
H2al1kJ3QP08 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
H2al1kJ3QP08 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.28■□□□□ 0.36
H2al1kJ3QP08 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H2al1kJ3QP08 Gm42596-201ENSMUST00000196305 1958 ntBASIC17.25■□□□□ 0.35
H2al1kJ3QP08 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
H2al1kJ3QP08 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
H2al1kJ3QP08 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
H2al1kJ3QP08 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
H2al1kJ3QP08 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
H2al1kJ3QP08 Zxda-201ENSMUST00000117281 2621 ntBASIC16.96■□□□□ 0.3
H2al1kJ3QP08 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2al1kJ3QP08 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2al1kJ3QP08 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
H2al1kJ3QP08 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H2al1kJ3QP08 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H2al1kJ3QP08 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
H2al1kJ3QP08 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.81■□□□□ 0.28
H2al1kJ3QP08 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
H2al1kJ3QP08 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
H2al1kJ3QP08 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
H2al1kJ3QP08 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
H2al1kJ3QP08 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
H2al1kJ3QP08 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.62■□□□□ 0.25
H2al1kJ3QP08 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
H2al1kJ3QP08 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
H2al1kJ3QP08 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
H2al1kJ3QP08 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
H2al1kJ3QP08 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2al1kJ3QP08 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
H2al1kJ3QP08 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
H2al1kJ3QP08 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
H2al1kJ3QP08 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
H2al1kJ3QP08 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
H2al1kJ3QP08 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
H2al1kJ3QP08 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
H2al1kJ3QP08 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
H2al1kJ3QP08 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
H2al1kJ3QP08 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
H2al1kJ3QP08 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
H2al1kJ3QP08 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
H2al1kJ3QP08 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
H2al1kJ3QP08 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H2al1kJ3QP08 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
H2al1kJ3QP08 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
H2al1kJ3QP08 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
H2al1kJ3QP08 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
H2al1kJ3QP08 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
H2al1kJ3QP08 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2al1kJ3QP08 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
H2al1kJ3QP08 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2al1kJ3QP08 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
H2al1kJ3QP08 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
H2al1kJ3QP08 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
H2al1kJ3QP08 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
H2al1kJ3QP08 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
H2al1kJ3QP08 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2al1kJ3QP08 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
H2al1kJ3QP08 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
H2al1kJ3QP08 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
H2al1kJ3QP08 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2al1kJ3QP08 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.04■□□□□ 0.16
H2al1kJ3QP08 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
H2al1kJ3QP08 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
H2al1kJ3QP08 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2al1kJ3QP08 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
H2al1kJ3QP08 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2al1kJ3QP08 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
H2al1kJ3QP08 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
H2al1kJ3QP08 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
H2al1kJ3QP08 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
H2al1kJ3QP08 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
H2al1kJ3QP08 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
H2al1kJ3QP08 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
H2al1kJ3QP08 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms