Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Sox16Q62247 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sox16Q62247 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Sox16Q62247 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Sox16Q62247 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sox16Q62247 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sox16Q62247 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Sox16Q62247 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sox16Q62247 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Sox16Q62247 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC17.85■□□□□ 0.45
Sox16Q62247 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Sox16Q62247 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Sox16Q62247 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Sox16Q62247 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Sox16Q62247 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sox16Q62247 Psd-208ENSMUST00000224556 2034 ntBASIC17.44■□□□□ 0.38
Sox16Q62247 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Sox16Q62247 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Sox16Q62247 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Sox16Q62247 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox16Q62247 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Sox16Q62247 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Sox16Q62247 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Sox16Q62247 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Sox16Q62247 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox16Q62247 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Sox16Q62247 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sox16Q62247 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sox16Q62247 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Sox16Q62247 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sox16Q62247 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox16Q62247 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox16Q62247 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox16Q62247 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox16Q62247 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox16Q62247 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sox16Q62247 Gm42596-201ENSMUST00000196305 1958 ntBASIC16.79■□□□□ 0.28
Sox16Q62247 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Sox16Q62247 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Sox16Q62247 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Sox16Q62247 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Sox16Q62247 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Sox16Q62247 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Sox16Q62247 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC16.63■□□□□ 0.25
Sox16Q62247 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Sox16Q62247 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Sox16Q62247 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Sox16Q62247 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Sox16Q62247 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox16Q62247 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sox16Q62247 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sox16Q62247 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox16Q62247 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox16Q62247 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
Sox16Q62247 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Sox16Q62247 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Sox16Q62247 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Sox16Q62247 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Sox16Q62247 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Sox16Q62247 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox16Q62247 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Sox16Q62247 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Sox16Q62247 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sox16Q62247 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Sox16Q62247 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Sox16Q62247 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Sox16Q62247 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox16Q62247 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sox16Q62247 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Sox16Q62247 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Sox16Q62247 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Sox16Q62247 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sox16Q62247 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox16Q62247 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sox16Q62247 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.12■□□□□ 0.17
Sox16Q62247 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sox16Q62247 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sox16Q62247 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox16Q62247 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Sox16Q62247 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Sox16Q62247 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox16Q62247 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox16Q62247 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
Sox16Q62247 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Sox16Q62247 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Sox16Q62247 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox16Q62247 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Sox16Q62247 Zxda-201ENSMUST00000117281 2621 ntBASIC16.04■□□□□ 0.16
Sox16Q62247 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Sox16Q62247 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Sox16Q62247 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Sox16Q62247 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Sox16Q62247 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox16Q62247 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Sox16Q62247 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Sox16Q62247 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC15.98■□□□□ 0.15
Sox16Q62247 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Sox16Q62247 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Sox16Q62247 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Sox16Q62247 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms