RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 NischQ80TM9 1593 aa26.79■■□□□ 1.88
Pdlim5-208ENSMUST00000196220 Gm35339A0A140LHH9 1649 aa26.64■■□□□ 1.86
Pdlim5-208ENSMUST00000196220 Abcc9P70170 1546 aa26.08■■□□□ 1.77
Pdlim5-208ENSMUST00000196220 Abcc8B2RUS7 1588 aa25.56■■□□□ 1.68
Pdlim5-208ENSMUST00000196220 Rhox8Q6VSS7 320 aa24.25■■□□□ 1.47
Pdlim5-208ENSMUST00000196220 Rtl1Q7M732 1744 aa24.13■■□□□ 1.45
Pdlim5-208ENSMUST00000196220 Dcaf1Q80TR8 1506 aa24.02■■□□□ 1.44
Pdlim5-208ENSMUST00000196220 ScribQ80U72 1612 aa23.88■■□□□ 1.41
Pdlim5-208ENSMUST00000196220 Ccdc180J3QNE4 1664 aa23.53■■□□□ 1.36
Pdlim5-208ENSMUST00000196220 Rb1cc1Q9ESK9 1588 aa23.43■■□□□ 1.34
Pdlim5-208ENSMUST00000196220 Kdm5dQ62240 1548 aa23.4■■□□□ 1.34
Pdlim5-208ENSMUST00000196220 NacadQ5SWP3 1504 aa23.37■■□□□ 1.33
Pdlim5-208ENSMUST00000196220 Baz1aO88379 1555 aa23.23■■□□□ 1.31
Pdlim5-208ENSMUST00000196220 Zcchc6Q5BLK4 1491 aaKnown RBP23.17■■□□□ 1.3
Pdlim5-208ENSMUST00000196220 Crybg2B7ZCC2 1516 aa23.06■■□□□ 1.28
Pdlim5-208ENSMUST00000196220 Sycp2Q9CUU3 1500 aa22.83■■□□□ 1.25
Pdlim5-208ENSMUST00000196220 Smarca2Q6DIC0 1577 aa22.68■■□□□ 1.22
Pdlim5-208ENSMUST00000196220 HrcG5E8J6 738 aa22.48■■□□□ 1.19
Pdlim5-208ENSMUST00000196220 Ccdc136Q3TVA9 1136 aa22.46■■□□□ 1.19
Pdlim5-208ENSMUST00000196220 Trim41Q5NCC3 630 aa22.34■■□□□ 1.17
Pdlim5-208ENSMUST00000196220 BicraF8VPZ9 1578 aa22.26■■□□□ 1.15
Pdlim5-208ENSMUST00000196220 Brd4Q9ESU6 1400 aaKnown RBP22.15■■□□□ 1.14
Pdlim5-208ENSMUST00000196220 Cecr2E9Q2Z1 1453 aa22.04■■□□□ 1.12
Pdlim5-208ENSMUST00000196220 Cep164Q5DU05 1446 aa21.86■■□□□ 1.09
Pdlim5-208ENSMUST00000196220 Synj1Q8CHC4 1574 aa21.85■■□□□ 1.09
Pdlim5-208ENSMUST00000196220 CftrP26361 1476 aa21.83■■□□□ 1.08
Pdlim5-208ENSMUST00000196220 Smarca4Q3TKT4 1613 aaKnown RBP21.78■■□□□ 1.08
Pdlim5-208ENSMUST00000196220 Golga3P55937 1487 aa21.78■■□□□ 1.08
Pdlim5-208ENSMUST00000196220 Cttnbp2B9EJA2 1648 aa21.76■■□□□ 1.07
Pdlim5-208ENSMUST00000196220 Rpgrip1Q9EPQ2 1331 aa21.64■■□□□ 1.06
Pdlim5-208ENSMUST00000196220 Top2bQ64511 1612 aa21.58■■□□□ 1.05
Pdlim5-208ENSMUST00000196220 Cngb1E1AZ71 1325 aa21.56■■□□□ 1.04
Pdlim5-208ENSMUST00000196220 Rsf1E9PWW9 1441 aaKnown RBP21.56■■□□□ 1.04
Pdlim5-208ENSMUST00000196220 Atad2bE9Q166 1460 aaKnown RBP21.52■■□□□ 1.04
Pdlim5-208ENSMUST00000196220 Iqgap2Q3UQ44 1575 aa21.47■■□□□ 1.03
Pdlim5-208ENSMUST00000196220 Pds5bQ4VA53 1446 aaKnown RBP21.47■■□□□ 1.03
Pdlim5-208ENSMUST00000196220 Esf1Q3V1V3 845 aaKnown RBP21.45■■□□□ 1.02
Pdlim5-208ENSMUST00000196220 Ccdc88bQ4QRL3 1481 aa21.43■■□□□ 1.02
Pdlim5-208ENSMUST00000196220 Chic1Q8CBW7 227 aa21.41■■□□□ 1.02
Pdlim5-208ENSMUST00000196220 Acin1Q9JIX8 1338 aaKnown RBP21.31■■□□□ 1
Pdlim5-208ENSMUST00000196220 Fmn1Q05860 1466 aa21.3■■□□□ 1
Pdlim5-208ENSMUST00000196220 Cc2d2aQ8CFW7 1633 aa21.21■□□□□ 0.99
Pdlim5-208ENSMUST00000196220 Top2aQ01320 1528 aaKnown RBP21.12■□□□□ 0.97
Pdlim5-208ENSMUST00000196220 Wdr62Q3U3T8 1523 aa21.12■□□□□ 0.97
Pdlim5-208ENSMUST00000196220 Frmpd1A2AKB4 1549 aa21.07■□□□□ 0.96
Pdlim5-208ENSMUST00000196220 Gab3Q8BSM5 595 aa21.05■□□□□ 0.96
Pdlim5-208ENSMUST00000196220 TnnQ80Z71 1560 aa21.04■□□□□ 0.96
Pdlim5-208ENSMUST00000196220 Ercc6F8VPZ5 1481 aa21.02■□□□□ 0.96
Pdlim5-208ENSMUST00000196220 Rapgef2Q8CHG7 1496 aa21.01■□□□□ 0.95
Pdlim5-208ENSMUST00000196220 Ehmt2Q9Z148 1263 aaKnown RBP21.01■□□□□ 0.95
Pdlim5-208ENSMUST00000196220 Lamc3Q9R0B6 1581 aa20.92■□□□□ 0.94
Pdlim5-208ENSMUST00000196220 Cep162Q6ZQ06 1403 aa20.79■□□□□ 0.92
Pdlim5-208ENSMUST00000196220 Thoc2B1AZI6 1594 aaKnown RBP20.78■□□□□ 0.92
Pdlim5-208ENSMUST00000196220 Unc13aQ4KUS2 1712 aa20.77■□□□□ 0.92
Pdlim5-208ENSMUST00000196220 Eif4g1Q6NZJ6 1600 aaKnown RBP20.72■□□□□ 0.91
Pdlim5-208ENSMUST00000196220 Phldb1Q6PDH0 1371 aaKnown RBP20.72■□□□□ 0.91
Pdlim5-208ENSMUST00000196220 Kif15Q6P9L6 1387 aa20.71■□□□□ 0.91
Pdlim5-208ENSMUST00000196220 Camsap1A2AHC3 1581 aa20.65■□□□□ 0.9
Pdlim5-208ENSMUST00000196220 NrkQ9R0G8 1455 aa20.64■□□□□ 0.9
Pdlim5-208ENSMUST00000196220 Ccdc18Q640L5 1455 aa20.6■□□□□ 0.89
Pdlim5-208ENSMUST00000196220 Fam135aQ6NS59 1506 aa20.59■□□□□ 0.89
Pdlim5-208ENSMUST00000196220 Npm2Q80W85 207 aa20.57■□□□□ 0.88
Pdlim5-208ENSMUST00000196220 Shroom4Q1W617 1475 aa20.55■□□□□ 0.88
Pdlim5-208ENSMUST00000196220 Map3k1P53349 1493 aa20.53■□□□□ 0.88
Pdlim5-208ENSMUST00000196220 Baz1bQ9Z277 1479 aa20.52■□□□□ 0.88
Pdlim5-208ENSMUST00000196220 Arhgap35Q91YM2 1499 aa20.52■□□□□ 0.87
Pdlim5-208ENSMUST00000196220 Grin2bQ01097 1482 aa20.5■□□□□ 0.87
Pdlim5-208ENSMUST00000196220 PtprkP35822 1457 aa20.48■□□□□ 0.87
Pdlim5-208ENSMUST00000196220 Cux2P70298 1426 aa20.43■□□□□ 0.86
Pdlim5-208ENSMUST00000196220 NefmP08553 848 aa20.41■□□□□ 0.86
Pdlim5-208ENSMUST00000196220 Myt1lP97500 1187 aa20.41■□□□□ 0.86
Pdlim5-208ENSMUST00000196220 Ubl4bQ9CQ84 188 aa20.4■□□□□ 0.86
Pdlim5-208ENSMUST00000196220 Clip1Q922J3 1391 aa20.38■□□□□ 0.85
Pdlim5-208ENSMUST00000196220 Il27Q8K3I6 234 aa20.36■□□□□ 0.85
Pdlim5-208ENSMUST00000196220 Efcab5A0JP43 1406 aa20.36■□□□□ 0.85
Pdlim5-208ENSMUST00000196220 Mier1Q5UAK0 511 aa20.35■□□□□ 0.85
Pdlim5-208ENSMUST00000196220 Mroh2bQ7M6Y6 1581 aa20.34■□□□□ 0.85
Pdlim5-208ENSMUST00000196220 AqrQ8CFQ3 1481 aaKnown RBP20.34■□□□□ 0.85
Pdlim5-208ENSMUST00000196220 Eea1Q8BL66 1411 aa20.32■□□□□ 0.84
Pdlim5-208ENSMUST00000196220 Npm1Q61937 292 aaKnown RBP20.3■□□□□ 0.84
Pdlim5-208ENSMUST00000196220 LrpprcQ6PB66 1392 aaKnown RBP20.3■□□□□ 0.84
Pdlim5-208ENSMUST00000196220 PogzQ8BZH4 1409 aaKnown RBP20.28■□□□□ 0.84
Pdlim5-208ENSMUST00000196220 Arap1Q4LDD4 1452 aa20.2■□□□□ 0.82
Pdlim5-208ENSMUST00000196220 Duox2A2AQ99 1517 aa20.2■□□□□ 0.82
Pdlim5-208ENSMUST00000196220 Arhgef5E9Q7D5 1581 aa20.19■□□□□ 0.82
Pdlim5-208ENSMUST00000196220 Erich3F6QRE9 1637 aa20.18■□□□□ 0.82
Pdlim5-208ENSMUST00000196220 UbtfP25976 765 aaKnown RBP20.17■□□□□ 0.82
Pdlim5-208ENSMUST00000196220 Setd5Q5XJV7 1441 aa20.17■□□□□ 0.82
Pdlim5-208ENSMUST00000196220 Carmil1Q6EDY6 1374 aa20.16■□□□□ 0.82
Pdlim5-208ENSMUST00000196220 Zeb1Q64318 1117 aa20.1■□□□□ 0.81
Pdlim5-208ENSMUST00000196220 Dhx29Q6PGC1 1365 aaKnown RBP20.1■□□□□ 0.81
Pdlim5-208ENSMUST00000196220 Mrc2Q64449 1479 aa20.1■□□□□ 0.81
Pdlim5-208ENSMUST00000196220 Ankrd26Q811D2 1581 aa20.1■□□□□ 0.81
Pdlim5-208ENSMUST00000196220 Tiam1Q60610 1591 aa20.07■□□□□ 0.8
Pdlim5-208ENSMUST00000196220 SynmQ70IV5 1561 aa20.07■□□□□ 0.8
Pdlim5-208ENSMUST00000196220 Ncapd3Q6ZQK0 1506 aa20.05■□□□□ 0.8
Pdlim5-208ENSMUST00000196220 Pcgf6Q99NA9 353 aa20.05■□□□□ 0.8
Pdlim5-208ENSMUST00000196220 Rpap1Q80TE0 1409 aa20.04■□□□□ 0.8
Pdlim5-208ENSMUST00000196220 Plekhg3Q4VAC9 1341 aa20.04■□□□□ 0.8
Pdlim5-208ENSMUST00000196220 Polr1aO35134 1717 aaKnown RBP20.03■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 127.5 ms