RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 Krtap10-4Q08EG8 221 aa16.6■□□□□ 0.25
Ldb1-208ENSMUST00000185355 Bean1Q9EQG5 255 aa16.6■□□□□ 0.25
Ldb1-208ENSMUST00000185355 Dnah5Q8VHE6 4621 aa16.6■□□□□ 0.25
Ldb1-208ENSMUST00000185355 Defb12Q8K4N3 78 aa16.58■□□□□ 0.25
Ldb1-208ENSMUST00000185355 Igkv3-3A0A140T8Q0 119 aa16.55■□□□□ 0.24
Ldb1-208ENSMUST00000185355 Coa5Q99M07 74 aa16.55■□□□□ 0.24
Ldb1-208ENSMUST00000185355 Cdc42se1Q8BHL7 80 aa16.52■□□□□ 0.24
Ldb1-208ENSMUST00000185355 Vps13dB1ART2 4390 aa16.49■□□□□ 0.23
Ldb1-208ENSMUST00000185355 A530084C06RikQ3UTW2 186 aa16.47■□□□□ 0.23
Ldb1-208ENSMUST00000185355 Hectd4E9Q2E4 4418 aa16.43■□□□□ 0.22
Ldb1-208ENSMUST00000185355 Dnah2P0C6F1 4456 aa16.43■□□□□ 0.22
Ldb1-208ENSMUST00000185355 Gm10267M0QWD8 85 aa16.43■□□□□ 0.22
Ldb1-208ENSMUST00000185355 Dph3Q8K0W9 82 aa16.43■□□□□ 0.22
Ldb1-208ENSMUST00000185355 OxtP35454 125 aa16.42■□□□□ 0.22
Ldb1-208ENSMUST00000185355 Chtf8P0CG14 533 aa16.38■□□□□ 0.21
Ldb1-208ENSMUST00000185355 Krtap13O88375 197 aa16.38■□□□□ 0.21
Ldb1-208ENSMUST00000185355 ApobE9Q414 4505 aa16.35■□□□□ 0.21
Ldb1-208ENSMUST00000185355 Pkd1O08852 4293 aa16.34■□□□□ 0.21
Ldb1-208ENSMUST00000185355 Gm10197F6QEY5 67 aa16.29■□□□□ 0.2
Ldb1-208ENSMUST00000185355 Gm10160F6Y577 67 aa16.23■□□□□ 0.19
Ldb1-208ENSMUST00000185355 Spaca4Q80ZQ0 127 aa16.22■□□□□ 0.19
Ldb1-208ENSMUST00000185355 Cypt15B1AXS0 87 aa16.22■□□□□ 0.19
Ldb1-208ENSMUST00000185355 Stard9Q80TF6 4561 aa16.2■□□□□ 0.18
Ldb1-208ENSMUST00000185355 Krtap10-10A0A1W2P7T6 217 aa16.14■□□□□ 0.17
Ldb1-208ENSMUST00000185355 Gm2696A0A1W2P709 240 aa16.12■□□□□ 0.17
Ldb1-208ENSMUST00000185355 Defb13Q8R2I4 64 aa16.12■□□□□ 0.17
Ldb1-208ENSMUST00000185355 Gm10337F7DEP7 55 aa16.11■□□□□ 0.17
Ldb1-208ENSMUST00000185355 Lrp1bQ9JI18 4599 aa16.08■□□□□ 0.16
Ldb1-208ENSMUST00000185355 Phxr4P15974 95 aa16.05■□□□□ 0.16
Ldb1-208ENSMUST00000185355 Mrpl55Q9CZ83 127 aa16.05■□□□□ 0.16
Ldb1-208ENSMUST00000185355 Defb38Q7TNV7 63 aa16.03■□□□□ 0.16
Ldb1-208ENSMUST00000185355 Gm10643Q3URG9 111 aa15.98■□□□□ 0.15
Ldb1-208ENSMUST00000185355 Pkhd1E9PZ36 4059 aa15.97■□□□□ 0.15
Ldb1-208ENSMUST00000185355 H2al1bA0A087WP11 105 aa15.96■□□□□ 0.15
Ldb1-208ENSMUST00000185355 H2al1kJ3QP08 105 aa15.96■□□□□ 0.15
Ldb1-208ENSMUST00000185355 H2al1eQ810S6 105 aa15.96■□□□□ 0.15
Ldb1-208ENSMUST00000185355 H2al1mQ9DAD9 105 aa15.96■□□□□ 0.15
Ldb1-208ENSMUST00000185355 Fat1A0A1L1SQU7 4645 aa15.87■□□□□ 0.13
Ldb1-208ENSMUST00000185355 Wfdc3Q14AE4 130 aa15.86■□□□□ 0.13
Ldb1-208ENSMUST00000185355 Dync1h1Q9JHU4 4644 aaKnown RBP15.84■□□□□ 0.13
Ldb1-208ENSMUST00000185355 Gm21798J3QNU5 87 aa15.84■□□□□ 0.13
Ldb1-208ENSMUST00000185355 Gm20661K7N787 53 aa15.79■□□□□ 0.12
Ldb1-208ENSMUST00000185355 Fat2Q5F226 4351 aa15.78■□□□□ 0.12
Ldb1-208ENSMUST00000185355 Sox16Q62247 57 aa15.75■□□□□ 0.11
Ldb1-208ENSMUST00000185355 SacsQ9JLC8 4582 aa15.73■□□□□ 0.11
Ldb1-208ENSMUST00000185355 Rps29P62274 56 aa15.73■□□□□ 0.11
Ldb1-208ENSMUST00000185355 RetnlbQ99P86 105 aa15.67■□□□□ 0.1
Ldb1-208ENSMUST00000185355 Gm10999F6Q4M4 69 aa15.63■□□□□ 0.09
Ldb1-208ENSMUST00000185355 4933415A04RikQ9D443 101 aa15.6■□□□□ 0.09
Ldb1-208ENSMUST00000185355 Ryr3A2AGL3 4863 aa15.6■□□□□ 0.09
Ldb1-208ENSMUST00000185355 Gm26620Q9CY65 116 aa15.58■□□□□ 0.09
Ldb1-208ENSMUST00000185355 Ndufb1P0DN34 57 aa15.58■□□□□ 0.08
Ldb1-208ENSMUST00000185355 Krtap3-2Q9D638 99 aa15.55■□□□□ 0.08
Ldb1-208ENSMUST00000185355 Krtap3-3Q9D7P0 99 aa15.55■□□□□ 0.08
Ldb1-208ENSMUST00000185355 Q8BGJ3 129 aa15.53■□□□□ 0.08
Ldb1-208ENSMUST00000185355 2310034C09RikQ9D746 214 aa15.5■□□□□ 0.07
Ldb1-208ENSMUST00000185355 Limd2Q8BGB5 128 aa15.45■□□□□ 0.06
Ldb1-208ENSMUST00000185355 Uqcr11Q9CPX8 56 aa15.45■□□□□ 0.06
Ldb1-208ENSMUST00000185355 A930033H14RikG5E8X6 103 aa15.44■□□□□ 0.06
Ldb1-208ENSMUST00000185355 2310079G19RikQ9D6L6 185 aa15.44■□□□□ 0.06
Ldb1-208ENSMUST00000185355 SptssbQ925E8 76 aa15.4■□□□□ 0.06
Ldb1-208ENSMUST00000185355 Gm11939A2A592 99 aa15.39■□□□□ 0.05
Ldb1-208ENSMUST00000185355 Ryr2E9Q401 4966 aaKnown RBP15.38■□□□□ 0.05
Ldb1-208ENSMUST00000185355 Pkhd1l1Q80ZA4 4249 aa15.36■□□□□ 0.05
Ldb1-208ENSMUST00000185355 4930507D05RikQ8C9C9 103 aa15.31■□□□□ 0.04
Ldb1-208ENSMUST00000185355 Gm4491E0CX42 125 aa15.26■□□□□ 0.03
Ldb1-208ENSMUST00000185355 Vps13bQ80TY5 3993 aa15.21■□□□□ 0.03
Ldb1-208ENSMUST00000185355 Krtap19-5O08632 62 aa15.13■□□□□ 0.01
Ldb1-208ENSMUST00000185355 Defb1P56386 69 aa15.13■□□□□ 0.01
Ldb1-208ENSMUST00000185355 D6Ertd527eA0A0N4SWI3 464 aa15.1■□□□□ 0.01
Ldb1-208ENSMUST00000185355 Gm5767A0A0J9YTU8 78 aa15.06■□□□□ 0
Ldb1-208ENSMUST00000185355 Kmt2cQ8BRH4 4903 aa15.04■□□□□ -0
Ldb1-208ENSMUST00000185355 Lrp1Q91ZX7 4545 aaKnown RBP15.04■□□□□ -0
Ldb1-208ENSMUST00000185355 Ryr1E9PZQ0 5035 aa14.95□□□□□ -0.02
Ldb1-208ENSMUST00000185355 Gm3646F6S692 53 aa14.94□□□□□ -0.02
Ldb1-208ENSMUST00000185355 Fat3Q8BNA6 4555 aa14.87□□□□□ -0.03
Ldb1-208ENSMUST00000185355 9230102O04RikA2ASX7 82 aa14.84□□□□□ -0.03
Ldb1-208ENSMUST00000185355 Dnah8Q91XQ0 4731 aa14.79□□□□□ -0.04
Ldb1-208ENSMUST00000185355 Gm9736A0A1W2P7N1 277 aa14.78□□□□□ -0.04
Ldb1-208ENSMUST00000185355 Cox6b2Q80ZN9 88 aa14.7□□□□□ -0.06
Ldb1-208ENSMUST00000185355 Gm5965D3Z724 196 aa14.65□□□□□ -0.06
Ldb1-208ENSMUST00000185355 Rpl37Q9D823 97 aa14.64□□□□□ -0.07
Ldb1-208ENSMUST00000185355 Sec61gP60060 68 aa14.63□□□□□ -0.07
Ldb1-208ENSMUST00000185355 Ndufs5Q99LY9 106 aa14.63□□□□□ -0.07
Ldb1-208ENSMUST00000185355 Rnase13Q5GAM7 153 aa14.61□□□□□ -0.07
Ldb1-208ENSMUST00000185355 Krtap15-1Q9QZU5 150 aa14.57□□□□□ -0.08
Ldb1-208ENSMUST00000185355 Abca13Q5SSE9 5034 aa14.56□□□□□ -0.08
Ldb1-208ENSMUST00000185355 1700042G07RikB1AUF7 90 aa14.5□□□□□ -0.09
Ldb1-208ENSMUST00000185355 Mycbp2Q7TPH6 4711 aa14.5□□□□□ -0.09
Ldb1-208ENSMUST00000185355 Gm17416Q30KP4 66 aa14.37□□□□□ -0.11
Ldb1-208ENSMUST00000185355 Herc2Q4U2R1 4836 aa14.33□□□□□ -0.12
Ldb1-208ENSMUST00000185355 Gm9821Q8K076 103 aa14.32□□□□□ -0.12
Ldb1-208ENSMUST00000185355 Dnhd1D3Z2X2 4750 aa14.25□□□□□ -0.13
Ldb1-208ENSMUST00000185355 Gm17606F6ZL36 78 aa14.25□□□□□ -0.13
Ldb1-208ENSMUST00000185355 Pla2g10Q9QXX3 151 aa14.22□□□□□ -0.13
Ldb1-208ENSMUST00000185355 Gm20537G3UYK7 97 aa14.21□□□□□ -0.13
Ldb1-208ENSMUST00000185355 Kiaa1109A2AAE1 5005 aa14.21□□□□□ -0.13
Ldb1-208ENSMUST00000185355 Birc6O88738 4882 aa14.2□□□□□ -0.14
Ldb1-208ENSMUST00000185355 Gm10382Q3V0T5 144 aa14.13□□□□□ -0.15
Ldb1-208ENSMUST00000185355 Gm9955Q8CEJ8 102 aa14.13□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 175.7 ms