RNA–Protein interactions for RNA: ENSMUST00000185355.6

Ldb1-208, Transcript of LIM domain-binding protein 1, mousemouse

TSL 1 (best) BASIC

Gene Ldb1, Length 2,088 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-208ENSMUST00000185355 NischQ80TM9 1593 aa55.45■■■■■ 6.47
Ldb1-208ENSMUST00000185355 Gm35339A0A140LHH9 1649 aa54.99■■■■■ 6.39
Ldb1-208ENSMUST00000185355 Abcc9P70170 1546 aa53.94■■■■■ 6.22
Ldb1-208ENSMUST00000185355 Abcc8B2RUS7 1588 aa52.8■■■■■ 6.04
Ldb1-208ENSMUST00000185355 Rhox8Q6VSS7 320 aa50.56■■■■■ 5.68
Ldb1-208ENSMUST00000185355 Rtl1Q7M732 1744 aa50.26■■■■■ 5.64
Ldb1-208ENSMUST00000185355 Dcaf1Q80TR8 1506 aa49.4■■■■■ 5.5
Ldb1-208ENSMUST00000185355 ScribQ80U72 1612 aa49.4■■■■■ 5.5
Ldb1-208ENSMUST00000185355 Ccdc180J3QNE4 1664 aa49.07■■■■■ 5.45
Ldb1-208ENSMUST00000185355 Rb1cc1Q9ESK9 1588 aa48.58■■■■■ 5.37
Ldb1-208ENSMUST00000185355 Kdm5dQ62240 1548 aa48.39■■■■■ 5.34
Ldb1-208ENSMUST00000185355 Zcchc6Q5BLK4 1491 aaKnown RBP48.28■■■■■ 5.32
Ldb1-208ENSMUST00000185355 NacadQ5SWP3 1504 aa48.11■■■■■ 5.29
Ldb1-208ENSMUST00000185355 Baz1aO88379 1555 aa48.07■■■■■ 5.29
Ldb1-208ENSMUST00000185355 Crybg2B7ZCC2 1516 aa47.38■■■■■ 5.18
Ldb1-208ENSMUST00000185355 Sycp2Q9CUU3 1500 aa47.05■■■■■ 5.12
Ldb1-208ENSMUST00000185355 Smarca2Q6DIC0 1577 aa46.96■■■■■ 5.11
Ldb1-208ENSMUST00000185355 Ccdc136Q3TVA9 1136 aa46.86■■■■■ 5.09
Ldb1-208ENSMUST00000185355 HrcG5E8J6 738 aa46.61■■■■■ 5.05
Ldb1-208ENSMUST00000185355 Trim41Q5NCC3 630 aa46.22■■■■■ 4.99
Ldb1-208ENSMUST00000185355 BicraF8VPZ9 1578 aa46■■■■■ 4.95
Ldb1-208ENSMUST00000185355 Brd4Q9ESU6 1400 aaKnown RBP45.75■■■■■ 4.91
Ldb1-208ENSMUST00000185355 Cecr2E9Q2Z1 1453 aa45.67■■■■■ 4.9
Ldb1-208ENSMUST00000185355 Cep164Q5DU05 1446 aa45.44■■■■■ 4.87
Ldb1-208ENSMUST00000185355 Synj1Q8CHC4 1574 aa45.35■■■■■ 4.85
Ldb1-208ENSMUST00000185355 Rpgrip1Q9EPQ2 1331 aa45.3■■■■■ 4.84
Ldb1-208ENSMUST00000185355 CftrP26361 1476 aa45.12■■■■■ 4.81
Ldb1-208ENSMUST00000185355 Golga3P55937 1487 aa45.11■■■■■ 4.81
Ldb1-208ENSMUST00000185355 Cttnbp2B9EJA2 1648 aa45.05■■■■■ 4.8
Ldb1-208ENSMUST00000185355 Smarca4Q3TKT4 1613 aaKnown RBP44.98■■■■■ 4.79
Ldb1-208ENSMUST00000185355 Cngb1E1AZ71 1325 aa44.94■■■■■ 4.78
Ldb1-208ENSMUST00000185355 Rsf1E9PWW9 1441 aaKnown RBP44.89■■■■■ 4.78
Ldb1-208ENSMUST00000185355 Top2bQ64511 1612 aa44.77■■■■■ 4.76
Ldb1-208ENSMUST00000185355 Acin1Q9JIX8 1338 aaKnown RBP44.75■■■■■ 4.75
Ldb1-208ENSMUST00000185355 Ccdc88bQ4QRL3 1481 aa44.64■■■■■ 4.74
Ldb1-208ENSMUST00000185355 Chic1Q8CBW7 227 aa44.63■■■■■ 4.73
Ldb1-208ENSMUST00000185355 Esf1Q3V1V3 845 aaKnown RBP44.52■■■■■ 4.72
Ldb1-208ENSMUST00000185355 Ehmt2Q9Z148 1263 aaKnown RBP44.48■■■■■ 4.71
Ldb1-208ENSMUST00000185355 Iqgap2Q3UQ44 1575 aa44.37■■■■■ 4.69
Ldb1-208ENSMUST00000185355 Cc2d2aQ8CFW7 1633 aa44.24■■■■■ 4.67
Ldb1-208ENSMUST00000185355 Atad2bE9Q166 1460 aaKnown RBP44.22■■■■■ 4.67
Ldb1-208ENSMUST00000185355 Pds5bQ4VA53 1446 aaKnown RBP44.08■■■■■ 4.65
Ldb1-208ENSMUST00000185355 Gab3Q8BSM5 595 aa44.07■■■■■ 4.65
Ldb1-208ENSMUST00000185355 Fmn1Q05860 1466 aa44.06■■■■■ 4.64
Ldb1-208ENSMUST00000185355 Top2aQ01320 1528 aaKnown RBP43.81■■■■■ 4.6
Ldb1-208ENSMUST00000185355 Rapgef2Q8CHG7 1496 aa43.6■■■■■ 4.57
Ldb1-208ENSMUST00000185355 Wdr62Q3U3T8 1523 aa43.55■■■■■ 4.56
Ldb1-208ENSMUST00000185355 TnnQ80Z71 1560 aa43.53■■■■■ 4.56
Ldb1-208ENSMUST00000185355 Frmpd1A2AKB4 1549 aa43.48■■■■■ 4.55
Ldb1-208ENSMUST00000185355 Ercc6F8VPZ5 1481 aa43.28■■■■■ 4.52
Ldb1-208ENSMUST00000185355 Lamc3Q9R0B6 1581 aa43.2■■■■■ 4.51
Ldb1-208ENSMUST00000185355 Cep162Q6ZQ06 1403 aa43.17■■■■■ 4.5
Ldb1-208ENSMUST00000185355 Unc13aQ4KUS2 1712 aa43.13■■■■■ 4.49
Ldb1-208ENSMUST00000185355 Eif4g1Q6NZJ6 1600 aaKnown RBP43.04■■■■■ 4.48
Ldb1-208ENSMUST00000185355 Kif15Q6P9L6 1387 aa42.81■■■■■ 4.44
Ldb1-208ENSMUST00000185355 Npm2Q80W85 207 aa42.79■■■■■ 4.44
Ldb1-208ENSMUST00000185355 Camsap1A2AHC3 1581 aa42.76■■■■■ 4.44
Ldb1-208ENSMUST00000185355 Thoc2B1AZI6 1594 aaKnown RBP42.76■■■■■ 4.44
Ldb1-208ENSMUST00000185355 NrkQ9R0G8 1455 aa42.7■■■■■ 4.43
Ldb1-208ENSMUST00000185355 Myt1lP97500 1187 aa42.64■■■■■ 4.42
Ldb1-208ENSMUST00000185355 Mier1Q5UAK0 511 aa42.64■■■■■ 4.42
Ldb1-208ENSMUST00000185355 NefmP08553 848 aa42.59■■■■■ 4.41
Ldb1-208ENSMUST00000185355 Arhgap35Q91YM2 1499 aa42.58■■■■■ 4.41
Ldb1-208ENSMUST00000185355 Phldb1Q6PDH0 1371 aaKnown RBP42.56■■■■■ 4.4
Ldb1-208ENSMUST00000185355 PtprkP35822 1457 aa42.55■■■■■ 4.4
Ldb1-208ENSMUST00000185355 Shroom4Q1W617 1475 aa42.55■■■■■ 4.4
Ldb1-208ENSMUST00000185355 Ccdc18Q640L5 1455 aa42.53■■■■■ 4.4
Ldb1-208ENSMUST00000185355 Map3k1P53349 1493 aa42.41■■■■■ 4.38
Ldb1-208ENSMUST00000185355 Grin2bQ01097 1482 aa42.41■■■■■ 4.38
Ldb1-208ENSMUST00000185355 Clip1Q922J3 1391 aa42.38■■■■■ 4.37
Ldb1-208ENSMUST00000185355 Pcgf6Q99NA9 353 aa42.37■■■■■ 4.37
Ldb1-208ENSMUST00000185355 Il27Q8K3I6 234 aa42.34■■■■■ 4.37
Ldb1-208ENSMUST00000185355 Fam135aQ6NS59 1506 aa42.32■■■■■ 4.37
Ldb1-208ENSMUST00000185355 UbtfP25976 765 aaKnown RBP42.26■■■■■ 4.36
Ldb1-208ENSMUST00000185355 Cux2P70298 1426 aa42.18■■■■■ 4.34
Ldb1-208ENSMUST00000185355 Eea1Q8BL66 1411 aa42.15■■■■■ 4.34
Ldb1-208ENSMUST00000185355 Mroh2bQ7M6Y6 1581 aa42.11■■■■■ 4.33
Ldb1-208ENSMUST00000185355 Ubl4bQ9CQ84 188 aa42.06■■■■■ 4.32
Ldb1-208ENSMUST00000185355 Arap1Q4LDD4 1452 aa42.03■■■■■ 4.32
Ldb1-208ENSMUST00000185355 AqrQ8CFQ3 1481 aaKnown RBP42.01■■■■■ 4.32
Ldb1-208ENSMUST00000185355 Arhgef5E9Q7D5 1581 aa41.96■■■■■ 4.31
Ldb1-208ENSMUST00000185355 Baz1bQ9Z277 1479 aa41.95■■■■■ 4.31
Ldb1-208ENSMUST00000185355 Efcab5A0JP43 1406 aa41.93■■■■■ 4.3
Ldb1-208ENSMUST00000185355 Erich3F6QRE9 1637 aa41.92■■■■■ 4.3
Ldb1-208ENSMUST00000185355 Npm1Q61937 292 aaKnown RBP41.91■■■■■ 4.3
Ldb1-208ENSMUST00000185355 Plekhg3Q4VAC9 1341 aa41.9■■■■■ 4.3
Ldb1-208ENSMUST00000185355 Supt5hO55201 1082 aaKnown RBP41.89■■■■■ 4.3
Ldb1-208ENSMUST00000185355 Setd5Q5XJV7 1441 aa41.89■■■■■ 4.3
Ldb1-208ENSMUST00000185355 LrpprcQ6PB66 1392 aaKnown RBP41.87■■■■■ 4.29
Ldb1-208ENSMUST00000185355 PogzQ8BZH4 1409 aaKnown RBP41.84■■■■■ 4.29
Ldb1-208ENSMUST00000185355 Zeb1Q64318 1117 aa41.81■■■■■ 4.28
Ldb1-208ENSMUST00000185355 Ncapd3Q6ZQK0 1506 aa41.8■■■■■ 4.28
Ldb1-208ENSMUST00000185355 Ankrd26Q811D2 1581 aa41.79■■■■■ 4.28
Ldb1-208ENSMUST00000185355 Duox2A2AQ99 1517 aa41.75■■■■■ 4.27
Ldb1-208ENSMUST00000185355 Tiam1Q60610 1591 aa41.73■■■■■ 4.27
Ldb1-208ENSMUST00000185355 Carmil1Q6EDY6 1374 aa41.66■■■■■ 4.26
Ldb1-208ENSMUST00000185355 Pcf11G3X9Z4 1553 aa41.56■■■■■ 4.24
Ldb1-208ENSMUST00000185355 Lmo7E9PYF4 1699 aaKnown RBP41.56■■■■■ 4.24
Ldb1-208ENSMUST00000185355 SynmQ70IV5 1561 aa41.53■■■■■ 4.24
Ldb1-208ENSMUST00000185355 Dnajc5bQ9CQ94 199 aa41.52■■■■■ 4.24
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms