RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Ccdc179J3QM76 67 aa9.31□□□□□ -0.92
Vcan-201ENSMUST00000109543 Coa5Q99M07 74 aa9.29□□□□□ -0.92
Vcan-201ENSMUST00000109543 A530084C06RikQ3UTW2 186 aa9.28□□□□□ -0.92
Vcan-201ENSMUST00000109543 H2al1aQ5M8Q2 105 aa9.28□□□□□ -0.92
Vcan-201ENSMUST00000109543 Gm16253D3Z167 63 aa9.27□□□□□ -0.93
Vcan-201ENSMUST00000109543 Gm10267M0QWD8 85 aa9.27□□□□□ -0.93
Vcan-201ENSMUST00000109543 Dph3Q8K0W9 82 aa9.25□□□□□ -0.93
Vcan-201ENSMUST00000109543 Bean1Q9EQG5 255 aa9.24□□□□□ -0.93
Vcan-201ENSMUST00000109543 Cdc42se1Q8BHL7 80 aa9.23□□□□□ -0.93
Vcan-201ENSMUST00000109543 Hectd4E9Q2E4 4418 aa9.22□□□□□ -0.93
Vcan-201ENSMUST00000109543 Igkv3-3A0A140T8Q0 119 aa9.22□□□□□ -0.93
Vcan-201ENSMUST00000109543 Vps13dB1ART2 4390 aa9.22□□□□□ -0.93
Vcan-201ENSMUST00000109543 Krtap13O88375 197 aa9.21□□□□□ -0.94
Vcan-201ENSMUST00000109543 Chtf8P0CG14 533 aa9.2□□□□□ -0.94
Vcan-201ENSMUST00000109543 Pkd1O08852 4293 aa9.19□□□□□ -0.94
Vcan-201ENSMUST00000109543 Gm10197F6QEY5 67 aa9.19□□□□□ -0.94
Vcan-201ENSMUST00000109543 Dnah2P0C6F1 4456 aa9.18□□□□□ -0.94
Vcan-201ENSMUST00000109543 Stard9Q80TF6 4561 aa9.17□□□□□ -0.94
Vcan-201ENSMUST00000109543 Krtap10-10A0A1W2P7T6 217 aa9.15□□□□□ -0.94
Vcan-201ENSMUST00000109543 ApobE9Q414 4505 aa9.14□□□□□ -0.95
Vcan-201ENSMUST00000109543 Gm2696A0A1W2P709 240 aa9.11□□□□□ -0.95
Vcan-201ENSMUST00000109543 Spaca4Q80ZQ0 127 aa9.11□□□□□ -0.95
Vcan-201ENSMUST00000109543 Defb38Q7TNV7 63 aa9.11□□□□□ -0.95
Vcan-201ENSMUST00000109543 Gm10160F6Y577 67 aa9.09□□□□□ -0.95
Vcan-201ENSMUST00000109543 Lrp1bQ9JI18 4599 aa9.08□□□□□ -0.96
Vcan-201ENSMUST00000109543 OxtP35454 125 aa9.08□□□□□ -0.96
Vcan-201ENSMUST00000109543 Cypt15B1AXS0 87 aa9.05□□□□□ -0.96
Vcan-201ENSMUST00000109543 Defb13Q8R2I4 64 aa9.04□□□□□ -0.96
Vcan-201ENSMUST00000109543 Gm10337F7DEP7 55 aa9.02□□□□□ -0.97
Vcan-201ENSMUST00000109543 Mrpl55Q9CZ83 127 aa9.02□□□□□ -0.97
Vcan-201ENSMUST00000109543 Wfdc3Q14AE4 130 aa8.98□□□□□ -0.97
Vcan-201ENSMUST00000109543 Phxr4P15974 95 aa8.98□□□□□ -0.97
Vcan-201ENSMUST00000109543 Pkhd1E9PZ36 4059 aa8.97□□□□□ -0.97
Vcan-201ENSMUST00000109543 H2al1bA0A087WP11 105 aa8.93□□□□□ -0.98
Vcan-201ENSMUST00000109543 H2al1kJ3QP08 105 aa8.93□□□□□ -0.98
Vcan-201ENSMUST00000109543 H2al1eQ810S6 105 aa8.93□□□□□ -0.98
Vcan-201ENSMUST00000109543 H2al1mQ9DAD9 105 aa8.93□□□□□ -0.98
Vcan-201ENSMUST00000109543 Fat1A0A1L1SQU7 4645 aa8.91□□□□□ -0.98
Vcan-201ENSMUST00000109543 Gm21798J3QNU5 87 aa8.91□□□□□ -0.98
Vcan-201ENSMUST00000109543 Dync1h1Q9JHU4 4644 aaKnown RBP8.9□□□□□ -0.98
Vcan-201ENSMUST00000109543 Gm20661K7N787 53 aa8.87□□□□□ -0.99
Vcan-201ENSMUST00000109543 Fat2Q5F226 4351 aa8.84□□□□□ -0.99
Vcan-201ENSMUST00000109543 Gm10643Q3URG9 111 aa8.83□□□□□ -1
Vcan-201ENSMUST00000109543 RetnlbQ99P86 105 aa8.83□□□□□ -1
Vcan-201ENSMUST00000109543 SacsQ9JLC8 4582 aa8.82□□□□□ -1
Vcan-201ENSMUST00000109543 Ryr3A2AGL3 4863 aa8.81□□□□□ -1
Vcan-201ENSMUST00000109543 Gm10999F6Q4M4 69 aa8.79□□□□□ -1
Vcan-201ENSMUST00000109543 4933415A04RikQ9D443 101 aa8.76□□□□□ -1.01
Vcan-201ENSMUST00000109543 Sox16Q62247 57 aa8.74□□□□□ -1.01
Vcan-201ENSMUST00000109543 Q8BGJ3 129 aa8.72□□□□□ -1.01
Vcan-201ENSMUST00000109543 SptssbQ925E8 76 aa8.69□□□□□ -1.02
Vcan-201ENSMUST00000109543 Krtap3-2Q9D638 99 aa8.68□□□□□ -1.02
Vcan-201ENSMUST00000109543 2310034C09RikQ9D746 214 aa8.68□□□□□ -1.02
Vcan-201ENSMUST00000109543 Krtap3-3Q9D7P0 99 aa8.68□□□□□ -1.02
Vcan-201ENSMUST00000109543 Ndufb1P0DN34 57 aa8.68□□□□□ -1.02
Vcan-201ENSMUST00000109543 Gm26620Q9CY65 116 aa8.66□□□□□ -1.02
Vcan-201ENSMUST00000109543 Rps29P62274 56 aa8.65□□□□□ -1.02
Vcan-201ENSMUST00000109543 2310079G19RikQ9D6L6 185 aa8.62□□□□□ -1.03
Vcan-201ENSMUST00000109543 Uqcr11Q9CPX8 56 aa8.6□□□□□ -1.03
Vcan-201ENSMUST00000109543 Gm11939A2A592 99 aa8.59□□□□□ -1.03
Vcan-201ENSMUST00000109543 Ryr2E9Q401 4966 aaKnown RBP8.59□□□□□ -1.03
Vcan-201ENSMUST00000109543 Limd2Q8BGB5 128 aa8.59□□□□□ -1.03
Vcan-201ENSMUST00000109543 Defb1P56386 69 aa8.58□□□□□ -1.04
Vcan-201ENSMUST00000109543 A930033H14RikG5E8X6 103 aa8.57□□□□□ -1.04
Vcan-201ENSMUST00000109543 Gm4491E0CX42 125 aa8.55□□□□□ -1.04
Vcan-201ENSMUST00000109543 Lrp1Q91ZX7 4545 aaKnown RBP8.53□□□□□ -1.04
Vcan-201ENSMUST00000109543 4930507D05RikQ8C9C9 103 aa8.52□□□□□ -1.05
Vcan-201ENSMUST00000109543 Pkhd1l1Q80ZA4 4249 aa8.51□□□□□ -1.05
Vcan-201ENSMUST00000109543 Kmt2cQ8BRH4 4903 aa8.5□□□□□ -1.05
Vcan-201ENSMUST00000109543 Vps13bQ80TY5 3993 aa8.49□□□□□ -1.05
Vcan-201ENSMUST00000109543 D6Ertd527eA0A0N4SWI3 464 aa8.45□□□□□ -1.06
Vcan-201ENSMUST00000109543 Krtap19-5O08632 62 aa8.45□□□□□ -1.06
Vcan-201ENSMUST00000109543 Gm3646F6S692 53 aa8.41□□□□□ -1.06
Vcan-201ENSMUST00000109543 Gm5767A0A0J9YTU8 78 aa8.37□□□□□ -1.07
Vcan-201ENSMUST00000109543 Ryr1E9PZQ0 5035 aa8.37□□□□□ -1.07
Vcan-201ENSMUST00000109543 Fat3Q8BNA6 4555 aa8.36□□□□□ -1.07
Vcan-201ENSMUST00000109543 Gm9736A0A1W2P7N1 277 aa8.36□□□□□ -1.07
Vcan-201ENSMUST00000109543 Abca13Q5SSE9 5034 aa8.29□□□□□ -1.08
Vcan-201ENSMUST00000109543 Dnah8Q91XQ0 4731 aa8.28□□□□□ -1.08
Vcan-201ENSMUST00000109543 Mycbp2Q7TPH6 4711 aa8.27□□□□□ -1.09
Vcan-201ENSMUST00000109543 Ndufs5Q99LY9 106 aa8.26□□□□□ -1.09
Vcan-201ENSMUST00000109543 Gm5965D3Z724 196 aa8.24□□□□□ -1.09
Vcan-201ENSMUST00000109543 Sec61gP60060 68 aa8.19□□□□□ -1.1
Vcan-201ENSMUST00000109543 Cox6b2Q80ZN9 88 aa8.19□□□□□ -1.1
Vcan-201ENSMUST00000109543 Krtap15-1Q9QZU5 150 aa8.19□□□□□ -1.1
Vcan-201ENSMUST00000109543 9230102O04RikA2ASX7 82 aa8.18□□□□□ -1.1
Vcan-201ENSMUST00000109543 Rnase13Q5GAM7 153 aa8.15□□□□□ -1.1
Vcan-201ENSMUST00000109543 1700042G07RikB1AUF7 90 aa8.14□□□□□ -1.11
Vcan-201ENSMUST00000109543 Rpl37Q9D823 97 aa8.13□□□□□ -1.11
Vcan-201ENSMUST00000109543 Kiaa1109A2AAE1 5005 aa7.99□□□□□ -1.13
Vcan-201ENSMUST00000109543 Gm20537G3UYK7 97 aa7.98□□□□□ -1.13
Vcan-201ENSMUST00000109543 Herc2Q4U2R1 4836 aa7.98□□□□□ -1.13
Vcan-201ENSMUST00000109543 Dnhd1D3Z2X2 4750 aa7.98□□□□□ -1.13
Vcan-201ENSMUST00000109543 Gm9821Q8K076 103 aa7.95□□□□□ -1.14
Vcan-201ENSMUST00000109543 Gm17606F6ZL36 78 aa7.95□□□□□ -1.14
Vcan-201ENSMUST00000109543 Gm10382Q3V0T5 144 aa7.94□□□□□ -1.14
Vcan-201ENSMUST00000109543 Gm17416Q30KP4 66 aa7.94□□□□□ -1.14
Vcan-201ENSMUST00000109543 Birc6O88738 4882 aa7.92□□□□□ -1.14
Vcan-201ENSMUST00000109543 Pla2g10Q9QXX3 151 aa7.91□□□□□ -1.14
Vcan-201ENSMUST00000109543 HydinQ80W93 5154 aa7.9□□□□□ -1.15
Retrieved 100 of 22,080 RNA–protein pairs in 62.4 ms