RNA–Protein interactions for RNA: ENSMUST00000092569.12

Ccdc43-201, Transcript of Coiled-coil domain-containing protein 43, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc43, Length 2,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43-201ENSMUST00000092569 Znf706Q9D115 76 aaKnown RBP9.45□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 Defb39Q70KL3 74 aa9.44□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 Dnah2P0C6F1 4456 aa9.44□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 H2al1aQ5M8Q2 105 aa9.44□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 Atox1O08997 68 aaKnown RBP9.43□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 Pkd1O08852 4293 aa9.42□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 Krtap13O88375 197 aa9.42□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 Gm28374F6SG70 93 aa9.4□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 OxtP35454 125 aa9.4□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 Hectd4E9Q2E4 4418 aa9.4□□□□□ -0.9
Ccdc43-201ENSMUST00000092569 Ccdc179J3QM76 67 aa9.37□□□□□ -0.91
Ccdc43-201ENSMUST00000092569 Gm16253D3Z167 63 aa9.37□□□□□ -0.91
Ccdc43-201ENSMUST00000092569 Coa5Q99M07 74 aa9.37□□□□□ -0.91
Ccdc43-201ENSMUST00000092569 Gm10267M0QWD8 85 aa9.36□□□□□ -0.91
Ccdc43-201ENSMUST00000092569 A530084C06RikQ3UTW2 186 aa9.36□□□□□ -0.91
Ccdc43-201ENSMUST00000092569 Ryr3A2AGL3 4863 aa9.35□□□□□ -0.91
Ccdc43-201ENSMUST00000092569 Bean1Q9EQG5 255 aa9.35□□□□□ -0.91
Ccdc43-201ENSMUST00000092569 Dph3Q8K0W9 82 aa9.32□□□□□ -0.92
Ccdc43-201ENSMUST00000092569 ApobE9Q414 4505 aa9.31□□□□□ -0.92
Ccdc43-201ENSMUST00000092569 Igkv3-3A0A140T8Q0 119 aa9.3□□□□□ -0.92
Ccdc43-201ENSMUST00000092569 Chtf8P0CG14 533 aa9.3□□□□□ -0.92
Ccdc43-201ENSMUST00000092569 Cdc42se1Q8BHL7 80 aa9.3□□□□□ -0.92
Ccdc43-201ENSMUST00000092569 Lrp1bQ9JI18 4599 aa9.28□□□□□ -0.92
Ccdc43-201ENSMUST00000092569 Gm10197F6QEY5 67 aa9.27□□□□□ -0.93
Ccdc43-201ENSMUST00000092569 Fat1A0A1L1SQU7 4645 aa9.26□□□□□ -0.93
Ccdc43-201ENSMUST00000092569 Dync1h1Q9JHU4 4644 aaKnown RBP9.25□□□□□ -0.93
Ccdc43-201ENSMUST00000092569 Spaca4Q80ZQ0 127 aa9.23□□□□□ -0.93
Ccdc43-201ENSMUST00000092569 Defb38Q7TNV7 63 aa9.22□□□□□ -0.93
Ccdc43-201ENSMUST00000092569 Gm10337F7DEP7 55 aa9.21□□□□□ -0.94
Ccdc43-201ENSMUST00000092569 Pkhd1E9PZ36 4059 aa9.19□□□□□ -0.94
Ccdc43-201ENSMUST00000092569 Mrpl55Q9CZ83 127 aa9.18□□□□□ -0.94
Ccdc43-201ENSMUST00000092569 Gm10160F6Y577 67 aa9.16□□□□□ -0.94
Ccdc43-201ENSMUST00000092569 Cypt15B1AXS0 87 aa9.15□□□□□ -0.95
Ccdc43-201ENSMUST00000092569 Defb13Q8R2I4 64 aa9.12□□□□□ -0.95
Ccdc43-201ENSMUST00000092569 H2al1bA0A087WP11 105 aa9.1□□□□□ -0.95
Ccdc43-201ENSMUST00000092569 H2al1kJ3QP08 105 aa9.1□□□□□ -0.95
Ccdc43-201ENSMUST00000092569 H2al1eQ810S6 105 aa9.1□□□□□ -0.95
Ccdc43-201ENSMUST00000092569 H2al1mQ9DAD9 105 aa9.1□□□□□ -0.95
Ccdc43-201ENSMUST00000092569 Wfdc3Q14AE4 130 aa9.09□□□□□ -0.95
Ccdc43-201ENSMUST00000092569 Ryr2E9Q401 4966 aaKnown RBP9.08□□□□□ -0.96
Ccdc43-201ENSMUST00000092569 Fat2Q5F226 4351 aa9.04□□□□□ -0.96
Ccdc43-201ENSMUST00000092569 Phxr4P15974 95 aa9.04□□□□□ -0.96
Ccdc43-201ENSMUST00000092569 Gm21798J3QNU5 87 aa9.01□□□□□ -0.97
Ccdc43-201ENSMUST00000092569 RetnlbQ99P86 105 aa9.01□□□□□ -0.97
Ccdc43-201ENSMUST00000092569 SacsQ9JLC8 4582 aa8.95□□□□□ -0.98
Ccdc43-201ENSMUST00000092569 Gm20661K7N787 53 aa8.94□□□□□ -0.98
Ccdc43-201ENSMUST00000092569 Kmt2cQ8BRH4 4903 aa8.91□□□□□ -0.98
Ccdc43-201ENSMUST00000092569 Lrp1Q91ZX7 4545 aaKnown RBP8.88□□□□□ -0.99
Ccdc43-201ENSMUST00000092569 Gm10643Q3URG9 111 aa8.88□□□□□ -0.99
Ccdc43-201ENSMUST00000092569 Sox16Q62247 57 aa8.88□□□□□ -0.99
Ccdc43-201ENSMUST00000092569 Gm10999F6Q4M4 69 aa8.87□□□□□ -0.99
Ccdc43-201ENSMUST00000092569 4933415A04RikQ9D443 101 aa8.84□□□□□ -0.99
Ccdc43-201ENSMUST00000092569 Ryr1E9PZQ0 5035 aa8.83□□□□□ -1
Ccdc43-201ENSMUST00000092569 Vps13bQ80TY5 3993 aa8.82□□□□□ -1
Ccdc43-201ENSMUST00000092569 Krtap3-2Q9D638 99 aa8.81□□□□□ -1
Ccdc43-201ENSMUST00000092569 Krtap3-3Q9D7P0 99 aa8.81□□□□□ -1
Ccdc43-201ENSMUST00000092569 Q8BGJ3 129 aa8.8□□□□□ -1
Ccdc43-201ENSMUST00000092569 Pkhd1l1Q80ZA4 4249 aa8.79□□□□□ -1
Ccdc43-201ENSMUST00000092569 2310034C09RikQ9D746 214 aa8.77□□□□□ -1.01
Ccdc43-201ENSMUST00000092569 Gm26620Q9CY65 116 aa8.75□□□□□ -1.01
Ccdc43-201ENSMUST00000092569 SptssbQ925E8 76 aa8.74□□□□□ -1.01
Ccdc43-201ENSMUST00000092569 Rps29P62274 56 aa8.73□□□□□ -1.01
Ccdc43-201ENSMUST00000092569 Gm11939A2A592 99 aa8.72□□□□□ -1.01
Ccdc43-201ENSMUST00000092569 2310079G19RikQ9D6L6 185 aa8.72□□□□□ -1.01
Ccdc43-201ENSMUST00000092569 Abca13Q5SSE9 5034 aa8.71□□□□□ -1.02
Ccdc43-201ENSMUST00000092569 Krtap19-5O08632 62 aa8.71□□□□□ -1.02
Ccdc43-201ENSMUST00000092569 Ndufb1P0DN34 57 aa8.7□□□□□ -1.02
Ccdc43-201ENSMUST00000092569 Fat3Q8BNA6 4555 aa8.69□□□□□ -1.02
Ccdc43-201ENSMUST00000092569 Defb1P56386 69 aa8.68□□□□□ -1.02
Ccdc43-201ENSMUST00000092569 A930033H14RikG5E8X6 103 aa8.67□□□□□ -1.02
Ccdc43-201ENSMUST00000092569 Dnah8Q91XQ0 4731 aa8.66□□□□□ -1.02
Ccdc43-201ENSMUST00000092569 Uqcr11Q9CPX8 56 aa8.65□□□□□ -1.02
Ccdc43-201ENSMUST00000092569 Gm4491E0CX42 125 aa8.64□□□□□ -1.03
Ccdc43-201ENSMUST00000092569 Limd2Q8BGB5 128 aa8.62□□□□□ -1.03
Ccdc43-201ENSMUST00000092569 Mycbp2Q7TPH6 4711 aa8.62□□□□□ -1.03
Ccdc43-201ENSMUST00000092569 Gm9736A0A1W2P7N1 277 aa8.61□□□□□ -1.03
Ccdc43-201ENSMUST00000092569 4930507D05RikQ8C9C9 103 aa8.57□□□□□ -1.04
Ccdc43-201ENSMUST00000092569 D6Ertd527eA0A0N4SWI3 464 aa8.55□□□□□ -1.04
Ccdc43-201ENSMUST00000092569 Herc2Q4U2R1 4836 aa8.49□□□□□ -1.05
Ccdc43-201ENSMUST00000092569 Gm3646F6S692 53 aa8.49□□□□□ -1.05
Ccdc43-201ENSMUST00000092569 Gm5767A0A0J9YTU8 78 aa8.48□□□□□ -1.05
Ccdc43-201ENSMUST00000092569 Kiaa1109A2AAE1 5005 aa8.47□□□□□ -1.05
Ccdc43-201ENSMUST00000092569 HydinQ80W93 5154 aa8.4□□□□□ -1.06
Ccdc43-201ENSMUST00000092569 Gm5965D3Z724 196 aa8.37□□□□□ -1.07
Ccdc43-201ENSMUST00000092569 Birc6O88738 4882 aa8.37□□□□□ -1.07
Ccdc43-201ENSMUST00000092569 1700042G07RikB1AUF7 90 aa8.31□□□□□ -1.08
Ccdc43-201ENSMUST00000092569 Ndufs5Q99LY9 106 aa8.31□□□□□ -1.08
Ccdc43-201ENSMUST00000092569 Dnhd1D3Z2X2 4750 aa8.3□□□□□ -1.08
Ccdc43-201ENSMUST00000092569 Krtap15-1Q9QZU5 150 aa8.3□□□□□ -1.08
Ccdc43-201ENSMUST00000092569 9230102O04RikA2ASX7 82 aa8.28□□□□□ -1.08
Ccdc43-201ENSMUST00000092569 Cox6b2Q80ZN9 88 aa8.28□□□□□ -1.08
Ccdc43-201ENSMUST00000092569 Sec61gP60060 68 aa8.22□□□□□ -1.09
Ccdc43-201ENSMUST00000092569 Rpl37Q9D823 97 aa8.22□□□□□ -1.09
Ccdc43-201ENSMUST00000092569 Rnase13Q5GAM7 153 aa8.22□□□□□ -1.09
Ccdc43-201ENSMUST00000092569 PcloQ9QYX7 5068 aa8.22□□□□□ -1.09
Ccdc43-201ENSMUST00000092569 Lrp2A2ARV4 4660 aa8.19□□□□□ -1.1
Ccdc43-201ENSMUST00000092569 Gm20537G3UYK7 97 aa8.07□□□□□ -1.12
Ccdc43-201ENSMUST00000092569 Gm10382Q3V0T5 144 aa8.05□□□□□ -1.12
Ccdc43-201ENSMUST00000092569 Gm9821Q8K076 103 aa8.03□□□□□ -1.12
Ccdc43-201ENSMUST00000092569 Gm17416Q30KP4 66 aa8.02□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 84.9 ms