RNA–Protein interactions for RNA: ENSMUST00000092569.12

Ccdc43-201, Transcript of Coiled-coil domain-containing protein 43, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc43, Length 2,366 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc43-201ENSMUST00000092569 NischQ80TM9 1593 aa31.34■■■□□ 2.61
Ccdc43-201ENSMUST00000092569 Gm35339A0A140LHH9 1649 aa30.98■■■□□ 2.55
Ccdc43-201ENSMUST00000092569 Abcc9P70170 1546 aa30.39■■■□□ 2.45
Ccdc43-201ENSMUST00000092569 Abcc8B2RUS7 1588 aa29.93■■■□□ 2.38
Ccdc43-201ENSMUST00000092569 Rhox8Q6VSS7 320 aa28.78■■■□□ 2.2
Ccdc43-201ENSMUST00000092569 ScribQ80U72 1612 aa28.24■■■□□ 2.11
Ccdc43-201ENSMUST00000092569 Rtl1Q7M732 1744 aa28.19■■■□□ 2.1
Ccdc43-201ENSMUST00000092569 Dcaf1Q80TR8 1506 aa27.67■■■□□ 2.02
Ccdc43-201ENSMUST00000092569 Ccdc180J3QNE4 1664 aa27.63■■■□□ 2.01
Ccdc43-201ENSMUST00000092569 Kdm5dQ62240 1548 aa27.58■■■□□ 2.01
Ccdc43-201ENSMUST00000092569 Rb1cc1Q9ESK9 1588 aa27.42■■□□□ 1.98
Ccdc43-201ENSMUST00000092569 NacadQ5SWP3 1504 aa27.36■■□□□ 1.97
Ccdc43-201ENSMUST00000092569 Zcchc6Q5BLK4 1491 aaKnown RBP27.31■■□□□ 1.96
Ccdc43-201ENSMUST00000092569 Baz1aO88379 1555 aa27.06■■□□□ 1.92
Ccdc43-201ENSMUST00000092569 Sycp2Q9CUU3 1500 aa26.81■■□□□ 1.88
Ccdc43-201ENSMUST00000092569 Ccdc136Q3TVA9 1136 aa26.74■■□□□ 1.87
Ccdc43-201ENSMUST00000092569 Crybg2B7ZCC2 1516 aa26.54■■□□□ 1.84
Ccdc43-201ENSMUST00000092569 Smarca2Q6DIC0 1577 aa26.45■■□□□ 1.83
Ccdc43-201ENSMUST00000092569 BicraF8VPZ9 1578 aa26.34■■□□□ 1.81
Ccdc43-201ENSMUST00000092569 HrcG5E8J6 738 aa26.33■■□□□ 1.81
Ccdc43-201ENSMUST00000092569 Trim41Q5NCC3 630 aa26.12■■□□□ 1.77
Ccdc43-201ENSMUST00000092569 Cecr2E9Q2Z1 1453 aa26.05■■□□□ 1.76
Ccdc43-201ENSMUST00000092569 Brd4Q9ESU6 1400 aaKnown RBP25.76■■□□□ 1.71
Ccdc43-201ENSMUST00000092569 Cep164Q5DU05 1446 aa25.66■■□□□ 1.7
Ccdc43-201ENSMUST00000092569 Synj1Q8CHC4 1574 aa25.65■■□□□ 1.7
Ccdc43-201ENSMUST00000092569 Ehmt2Q9Z148 1263 aaKnown RBP25.63■■□□□ 1.69
Ccdc43-201ENSMUST00000092569 Cngb1E1AZ71 1325 aa25.58■■□□□ 1.69
Ccdc43-201ENSMUST00000092569 Rpgrip1Q9EPQ2 1331 aa25.55■■□□□ 1.68
Ccdc43-201ENSMUST00000092569 CftrP26361 1476 aa25.52■■□□□ 1.68
Ccdc43-201ENSMUST00000092569 Smarca4Q3TKT4 1613 aaKnown RBP25.52■■□□□ 1.68
Ccdc43-201ENSMUST00000092569 Rsf1E9PWW9 1441 aaKnown RBP25.48■■□□□ 1.67
Ccdc43-201ENSMUST00000092569 Golga3P55937 1487 aa25.47■■□□□ 1.67
Ccdc43-201ENSMUST00000092569 Chic1Q8CBW7 227 aa25.44■■□□□ 1.66
Ccdc43-201ENSMUST00000092569 Acin1Q9JIX8 1338 aaKnown RBP25.44■■□□□ 1.66
Ccdc43-201ENSMUST00000092569 Ccdc88bQ4QRL3 1481 aa25.35■■□□□ 1.65
Ccdc43-201ENSMUST00000092569 Cttnbp2B9EJA2 1648 aa25.35■■□□□ 1.65
Ccdc43-201ENSMUST00000092569 Esf1Q3V1V3 845 aaKnown RBP25.34■■□□□ 1.65
Ccdc43-201ENSMUST00000092569 Iqgap2Q3UQ44 1575 aa25.27■■□□□ 1.64
Ccdc43-201ENSMUST00000092569 Atad2bE9Q166 1460 aaKnown RBP25.24■■□□□ 1.63
Ccdc43-201ENSMUST00000092569 Top2bQ64511 1612 aa25.24■■□□□ 1.63
Ccdc43-201ENSMUST00000092569 Pds5bQ4VA53 1446 aaKnown RBP25.2■■□□□ 1.62
Ccdc43-201ENSMUST00000092569 Gab3Q8BSM5 595 aa25.19■■□□□ 1.62
Ccdc43-201ENSMUST00000092569 Cc2d2aQ8CFW7 1633 aa25.04■■□□□ 1.6
Ccdc43-201ENSMUST00000092569 Frmpd1A2AKB4 1549 aa24.87■■□□□ 1.57
Ccdc43-201ENSMUST00000092569 Wdr62Q3U3T8 1523 aa24.83■■□□□ 1.57
Ccdc43-201ENSMUST00000092569 Fmn1Q05860 1466 aa24.82■■□□□ 1.56
Ccdc43-201ENSMUST00000092569 Ercc6F8VPZ5 1481 aa24.76■■□□□ 1.55
Ccdc43-201ENSMUST00000092569 Top2aQ01320 1528 aaKnown RBP24.7■■□□□ 1.55
Ccdc43-201ENSMUST00000092569 Rapgef2Q8CHG7 1496 aa24.63■■□□□ 1.53
Ccdc43-201ENSMUST00000092569 Thoc2B1AZI6 1594 aaKnown RBP24.58■■□□□ 1.53
Ccdc43-201ENSMUST00000092569 Unc13aQ4KUS2 1712 aa24.56■■□□□ 1.52
Ccdc43-201ENSMUST00000092569 TnnQ80Z71 1560 aa24.49■■□□□ 1.51
Ccdc43-201ENSMUST00000092569 Kif15Q6P9L6 1387 aa24.45■■□□□ 1.5
Ccdc43-201ENSMUST00000092569 Cep162Q6ZQ06 1403 aa24.43■■□□□ 1.5
Ccdc43-201ENSMUST00000092569 Lamc3Q9R0B6 1581 aa24.4■■□□□ 1.5
Ccdc43-201ENSMUST00000092569 Phldb1Q6PDH0 1371 aaKnown RBP24.37■■□□□ 1.49
Ccdc43-201ENSMUST00000092569 Il27Q8K3I6 234 aa24.35■■□□□ 1.49
Ccdc43-201ENSMUST00000092569 Myt1lP97500 1187 aa24.32■■□□□ 1.48
Ccdc43-201ENSMUST00000092569 Mier1Q5UAK0 511 aa24.32■■□□□ 1.48
Ccdc43-201ENSMUST00000092569 Npm2Q80W85 207 aa24.29■■□□□ 1.48
Ccdc43-201ENSMUST00000092569 Ubl4bQ9CQ84 188 aa24.28■■□□□ 1.48
Ccdc43-201ENSMUST00000092569 Eif4g1Q6NZJ6 1600 aaKnown RBP24.28■■□□□ 1.48
Ccdc43-201ENSMUST00000092569 Dnajc5bQ9CQ94 199 aa24.24■■□□□ 1.47
Ccdc43-201ENSMUST00000092569 Fam135aQ6NS59 1506 aa24.23■■□□□ 1.47
Ccdc43-201ENSMUST00000092569 Pcgf6Q99NA9 353 aa24.22■■□□□ 1.47
Ccdc43-201ENSMUST00000092569 Camsap1A2AHC3 1581 aa24.18■■□□□ 1.46
Ccdc43-201ENSMUST00000092569 PtprkP35822 1457 aa24.15■■□□□ 1.46
Ccdc43-201ENSMUST00000092569 Cux2P70298 1426 aa24.15■■□□□ 1.46
Ccdc43-201ENSMUST00000092569 UbtfP25976 765 aaKnown RBP24.13■■□□□ 1.45
Ccdc43-201ENSMUST00000092569 Arhgap35Q91YM2 1499 aa24.08■■□□□ 1.45
Ccdc43-201ENSMUST00000092569 NefmP08553 848 aa24.08■■□□□ 1.45
Ccdc43-201ENSMUST00000092569 NrkQ9R0G8 1455 aa24.07■■□□□ 1.44
Ccdc43-201ENSMUST00000092569 Ccdc18Q640L5 1455 aa24.07■■□□□ 1.44
Ccdc43-201ENSMUST00000092569 Clip1Q922J3 1391 aa24.03■■□□□ 1.44
Ccdc43-201ENSMUST00000092569 Supt5hO55201 1082 aaKnown RBP24■■□□□ 1.43
Ccdc43-201ENSMUST00000092569 Shroom4Q1W617 1475 aa24■■□□□ 1.43
Ccdc43-201ENSMUST00000092569 Npm1Q61937 292 aaKnown RBP23.98■■□□□ 1.43
Ccdc43-201ENSMUST00000092569 Grin2bQ01097 1482 aa23.98■■□□□ 1.43
Ccdc43-201ENSMUST00000092569 Zeb1Q64318 1117 aa23.93■■□□□ 1.42
Ccdc43-201ENSMUST00000092569 Plekhg3Q4VAC9 1341 aa23.9■■□□□ 1.42
Ccdc43-201ENSMUST00000092569 Map3k1P53349 1493 aa23.83■■□□□ 1.41
Ccdc43-201ENSMUST00000092569 LrpprcQ6PB66 1392 aaKnown RBP23.83■■□□□ 1.41
Ccdc43-201ENSMUST00000092569 Arap1Q4LDD4 1452 aa23.82■■□□□ 1.4
Ccdc43-201ENSMUST00000092569 Eea1Q8BL66 1411 aa23.8■■□□□ 1.4
Ccdc43-201ENSMUST00000092569 Mroh2bQ7M6Y6 1581 aa23.76■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 PogzQ8BZH4 1409 aaKnown RBP23.76■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 Mrc2Q64449 1479 aa23.75■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 Baz1bQ9Z277 1479 aa23.74■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 Duox2A2AQ99 1517 aa23.73■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 Setd5Q5XJV7 1441 aa23.72■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 Ap3b1Q9Z1T1 1105 aa23.72■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 Dhx29Q6PGC1 1365 aaKnown RBP23.72■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 Arhgef5E9Q7D5 1581 aa23.71■■□□□ 1.39
Ccdc43-201ENSMUST00000092569 Ncapd3Q6ZQK0 1506 aa23.68■■□□□ 1.38
Ccdc43-201ENSMUST00000092569 Kif21aQ9QXL2 1672 aa23.67■■□□□ 1.38
Ccdc43-201ENSMUST00000092569 Efcab5A0JP43 1406 aa23.67■■□□□ 1.38
Ccdc43-201ENSMUST00000092569 Ankrd26Q811D2 1581 aa23.62■■□□□ 1.37
Ccdc43-201ENSMUST00000092569 AqrQ8CFQ3 1481 aaKnown RBP23.61■■□□□ 1.37
Ccdc43-201ENSMUST00000092569 Erich3F6QRE9 1637 aa23.61■■□□□ 1.37
Ccdc43-201ENSMUST00000092569 Samd9lQ69Z37 1561 aa23.6■■□□□ 1.37
Retrieved 100 of 22,080 RNA–protein pairs in 75.6 ms