RNA–Protein interactions for RNA: ENSMUST00000063116.9

Msx1-201, Transcript of Homeobox protein MSX-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Msx1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1-201ENSMUST00000063116 Rpl37aP61514 92 aa11.65□□□□□ -0.54
Msx1-201ENSMUST00000063116 B230307C23RikQ8BLB2 64 aa11.65□□□□□ -0.54
Msx1-201ENSMUST00000063116 SacsQ9JLC8 4582 aa11.64□□□□□ -0.55
Msx1-201ENSMUST00000063116 Spink8Q09TK9 105 aa11.6□□□□□ -0.55
Msx1-201ENSMUST00000063116 BikO70337 150 aa11.6□□□□□ -0.55
Msx1-201ENSMUST00000063116 Samd13D3YUG0 102 aa11.57□□□□□ -0.56
Msx1-201ENSMUST00000063116 Pkhd1l1Q80ZA4 4249 aa11.57□□□□□ -0.56
Msx1-201ENSMUST00000063116 Gm16253D3Z167 63 aa11.54□□□□□ -0.56
Msx1-201ENSMUST00000063116 Tmem258P61166 79 aa11.52□□□□□ -0.57
Msx1-201ENSMUST00000063116 Ryr1E9PZQ0 5035 aa11.51□□□□□ -0.57
Msx1-201ENSMUST00000063116 Rps28P62858 69 aaKnown RBP11.5□□□□□ -0.57
Msx1-201ENSMUST00000063116 A0A286YE49 62 aa11.5□□□□□ -0.57
Msx1-201ENSMUST00000063116 Mrpl55Q9CZ83 127 aa11.49□□□□□ -0.57
Msx1-201ENSMUST00000063116 Gm2310J3QNJ2 377 aa11.48□□□□□ -0.57
Msx1-201ENSMUST00000063116 RetnlbQ99P86 105 aa11.47□□□□□ -0.57
Msx1-201ENSMUST00000063116 Vps13bQ80TY5 3993 aa11.47□□□□□ -0.57
Msx1-201ENSMUST00000063116 Gm19935A0A1B0GSF9 52 aa11.47□□□□□ -0.57
Msx1-201ENSMUST00000063116 Kmt2cQ8BRH4 4903 aa11.46□□□□□ -0.57
Msx1-201ENSMUST00000063116 Spaca4Q80ZQ0 127 aa11.41□□□□□ -0.58
Msx1-201ENSMUST00000063116 Smlr1J3QMJ4 66 aa11.37□□□□□ -0.59
Msx1-201ENSMUST00000063116 Igkv3-3A0A140T8Q0 119 aa11.35□□□□□ -0.59
Msx1-201ENSMUST00000063116 Coa6Q8BGD8 79 aa11.35□□□□□ -0.59
Msx1-201ENSMUST00000063116 Dnah8Q91XQ0 4731 aa11.35□□□□□ -0.59
Msx1-201ENSMUST00000063116 1700074P13RikQ9D9G7 251 aa11.34□□□□□ -0.59
Msx1-201ENSMUST00000063116 Lrp1Q91ZX7 4545 aaKnown RBP11.32□□□□□ -0.6
Msx1-201ENSMUST00000063116 Atox1O08997 68 aaKnown RBP11.32□□□□□ -0.6
Msx1-201ENSMUST00000063116 Krtap19-5O08632 62 aa11.31□□□□□ -0.6
Msx1-201ENSMUST00000063116 Spint4Q9D263 159 aa11.31□□□□□ -0.6
Msx1-201ENSMUST00000063116 Pet100P0DJE0 76 aa11.27□□□□□ -0.6
Msx1-201ENSMUST00000063116 Dph3Q8K0W9 82 aa11.27□□□□□ -0.6
Msx1-201ENSMUST00000063116 Defb12Q8K4N3 78 aa11.27□□□□□ -0.6
Msx1-201ENSMUST00000063116 SnurfQ9WU12 71 aa11.27□□□□□ -0.6
Msx1-201ENSMUST00000063116 Fat3Q8BNA6 4555 aa11.27□□□□□ -0.61
Msx1-201ENSMUST00000063116 H2al1aQ5M8Q2 105 aa11.23□□□□□ -0.61
Msx1-201ENSMUST00000063116 Cypt15B1AXS0 87 aa11.19□□□□□ -0.62
Msx1-201ENSMUST00000063116 Gm10267M0QWD8 85 aa11.19□□□□□ -0.62
Msx1-201ENSMUST00000063116 Serp1Q9Z1W5 66 aa11.17□□□□□ -0.62
Msx1-201ENSMUST00000063116 Brk1Q91VR8 75 aa11.15□□□□□ -0.62
Msx1-201ENSMUST00000063116 Abca13Q5SSE9 5034 aa11.12□□□□□ -0.63
Msx1-201ENSMUST00000063116 Coa5Q99M07 74 aa11.11□□□□□ -0.63
Msx1-201ENSMUST00000063116 Defb13Q8R2I4 64 aa11.1□□□□□ -0.63
Msx1-201ENSMUST00000063116 Chtf8P0CG14 533 aa11.09□□□□□ -0.63
Msx1-201ENSMUST00000063116 Rps29P62274 56 aa11.07□□□□□ -0.64
Msx1-201ENSMUST00000063116 Cdc42se1Q8BHL7 80 aa11.01□□□□□ -0.65
Msx1-201ENSMUST00000063116 Gm10160F6Y577 67 aa10.99□□□□□ -0.65
Msx1-201ENSMUST00000063116 Gm10337F7DEP7 55 aa10.99□□□□□ -0.65
Msx1-201ENSMUST00000063116 Herc2Q4U2R1 4836 aa10.97□□□□□ -0.65
Msx1-201ENSMUST00000063116 Gm9736A0A1W2P7N1 277 aa10.96□□□□□ -0.65
Msx1-201ENSMUST00000063116 Birc6O88738 4882 aa10.95□□□□□ -0.66
Msx1-201ENSMUST00000063116 Dnhd1D3Z2X2 4750 aa10.94□□□□□ -0.66
Msx1-201ENSMUST00000063116 Gm11939A2A592 99 aa10.94□□□□□ -0.66
Msx1-201ENSMUST00000063116 D6Ertd527eA0A0N4SWI3 464 aa10.93□□□□□ -0.66
Msx1-201ENSMUST00000063116 Kiaa1109A2AAE1 5005 aa10.93□□□□□ -0.66
Msx1-201ENSMUST00000063116 Mycbp2Q7TPH6 4711 aa10.92□□□□□ -0.66
Msx1-201ENSMUST00000063116 Defb38Q7TNV7 63 aa10.92□□□□□ -0.66
Msx1-201ENSMUST00000063116 A530084C06RikQ3UTW2 186 aa10.91□□□□□ -0.66
Msx1-201ENSMUST00000063116 Gm10197F6QEY5 67 aa10.88□□□□□ -0.67
Msx1-201ENSMUST00000063116 H2al1bA0A087WP11 105 aa10.87□□□□□ -0.67
Msx1-201ENSMUST00000063116 H2al1kJ3QP08 105 aa10.87□□□□□ -0.67
Msx1-201ENSMUST00000063116 H2al1eQ810S6 105 aa10.87□□□□□ -0.67
Msx1-201ENSMUST00000063116 H2al1mQ9DAD9 105 aa10.87□□□□□ -0.67
Msx1-201ENSMUST00000063116 Gm26620Q9CY65 116 aa10.84□□□□□ -0.67
Msx1-201ENSMUST00000063116 Krtap3-2Q9D638 99 aa10.81□□□□□ -0.68
Msx1-201ENSMUST00000063116 Krtap3-3Q9D7P0 99 aa10.81□□□□□ -0.68
Msx1-201ENSMUST00000063116 Gm10643Q3URG9 111 aa10.8□□□□□ -0.68
Msx1-201ENSMUST00000063116 Gm21798J3QNU5 87 aa10.78□□□□□ -0.68
Msx1-201ENSMUST00000063116 HydinQ80W93 5154 aa10.71□□□□□ -0.69
Msx1-201ENSMUST00000063116 Phxr4P15974 95 aa10.71□□□□□ -0.69
Msx1-201ENSMUST00000063116 Gm5965D3Z724 196 aa10.69□□□□□ -0.7
Msx1-201ENSMUST00000063116 Gm10999F6Q4M4 69 aa10.69□□□□□ -0.7
Msx1-201ENSMUST00000063116 Gm5767A0A0J9YTU8 78 aa10.68□□□□□ -0.7
Msx1-201ENSMUST00000063116 Q8BGJ3 129 aa10.64□□□□□ -0.71
Msx1-201ENSMUST00000063116 Gm20661K7N787 53 aa10.62□□□□□ -0.71
Msx1-201ENSMUST00000063116 Sox16Q62247 57 aa10.59□□□□□ -0.71
Msx1-201ENSMUST00000063116 2310034C09RikQ9D746 214 aa10.58□□□□□ -0.72
Msx1-201ENSMUST00000063116 A930033H14RikG5E8X6 103 aa10.57□□□□□ -0.72
Msx1-201ENSMUST00000063116 Gm4491E0CX42 125 aa10.52□□□□□ -0.72
Msx1-201ENSMUST00000063116 2310079G19RikQ9D6L6 185 aa10.51□□□□□ -0.73
Msx1-201ENSMUST00000063116 Lrp2A2ARV4 4660 aa10.49□□□□□ -0.73
Msx1-201ENSMUST00000063116 4930507D05RikQ8C9C9 103 aa10.48□□□□□ -0.73
Msx1-201ENSMUST00000063116 Krtap15-1Q9QZU5 150 aa10.45□□□□□ -0.74
Msx1-201ENSMUST00000063116 PcloQ9QYX7 5068 aa10.44□□□□□ -0.74
Msx1-201ENSMUST00000063116 Ndufb1P0DN34 57 aa10.41□□□□□ -0.74
Msx1-201ENSMUST00000063116 Rpl37Q9D823 97 aa10.39□□□□□ -0.75
Msx1-201ENSMUST00000063116 Uqcr11Q9CPX8 56 aa10.37□□□□□ -0.75
Msx1-201ENSMUST00000063116 Limd2Q8BGB5 128 aa10.36□□□□□ -0.75
Msx1-201ENSMUST00000063116 4933415A04RikQ9D443 101 aa10.35□□□□□ -0.75
Msx1-201ENSMUST00000063116 SptssbQ925E8 76 aa10.34□□□□□ -0.75
Msx1-201ENSMUST00000063116 Defb1P56386 69 aa10.33□□□□□ -0.76
Msx1-201ENSMUST00000063116 Gm9821Q8K076 103 aa10.27□□□□□ -0.76
Msx1-201ENSMUST00000063116 Rnase13Q5GAM7 153 aa10.23□□□□□ -0.77
Msx1-201ENSMUST00000063116 Lce1mQ9CR91 182 aa10.23□□□□□ -0.77
Msx1-201ENSMUST00000063116 9230102O04RikA2ASX7 82 aa10.23□□□□□ -0.77
Msx1-201ENSMUST00000063116 Herc1E9PZP8 4859 aa10.13□□□□□ -0.79
Msx1-201ENSMUST00000063116 Gm17416Q30KP4 66 aa10.06□□□□□ -0.8
Msx1-201ENSMUST00000063116 Cox6b2Q80ZN9 88 aa10.04□□□□□ -0.8
Msx1-201ENSMUST00000063116 Sec61gP60060 68 aa9.99□□□□□ -0.81
Msx1-201ENSMUST00000063116 2310057N15RikQ9D6T8 200 aa9.99□□□□□ -0.81
Msx1-201ENSMUST00000063116 Gm3646F6S692 53 aa9.91□□□□□ -0.82
Msx1-201ENSMUST00000063116 Sec61bQ9CQS8 96 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 46.8 ms