RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 Spaca4Q80ZQ0 127 aa9.78□□□□□ -0.84
Usb1-201ENSMUST00000034245 Fat2Q5F226 4351 aa9.77□□□□□ -0.85
Usb1-201ENSMUST00000034245 Prr15lQ8JZM2 100 aa9.75□□□□□ -0.85
Usb1-201ENSMUST00000034245 Pkhd1l1Q80ZA4 4249 aa9.75□□□□□ -0.85
Usb1-201ENSMUST00000034245 Igkv8-19A0A0G2JFN8 121 aa9.74□□□□□ -0.85
Usb1-201ENSMUST00000034245 SmcpP15265 143 aa9.74□□□□□ -0.85
Usb1-201ENSMUST00000034245 Kmt2cQ8BRH4 4903 aa9.71□□□□□ -0.86
Usb1-201ENSMUST00000034245 Reg3aO09037 175 aa9.7□□□□□ -0.86
Usb1-201ENSMUST00000034245 Dnah8Q91XQ0 4731 aa9.7□□□□□ -0.86
Usb1-201ENSMUST00000034245 Scgb1b2O35176 93 aa9.7□□□□□ -0.86
Usb1-201ENSMUST00000034245 Defa21Q8C1P2 93 aa9.7□□□□□ -0.86
Usb1-201ENSMUST00000034245 B230307C23RikQ8BLB2 64 aa9.68□□□□□ -0.86
Usb1-201ENSMUST00000034245 Vps13bQ80TY5 3993 aa9.65□□□□□ -0.86
Usb1-201ENSMUST00000034245 Tmem258P61166 79 aa9.65□□□□□ -0.87
Usb1-201ENSMUST00000034245 Smim20D3Z7Q2 69 aa9.63□□□□□ -0.87
Usb1-201ENSMUST00000034245 BikO70337 150 aa9.63□□□□□ -0.87
Usb1-201ENSMUST00000034245 Rps29P62274 56 aa9.61□□□□□ -0.87
Usb1-201ENSMUST00000034245 Spink8Q09TK9 105 aa9.61□□□□□ -0.87
Usb1-201ENSMUST00000034245 Gm2310J3QNJ2 377 aa9.59□□□□□ -0.87
Usb1-201ENSMUST00000034245 D6Ertd527eA0A0N4SWI3 464 aa9.58□□□□□ -0.88
Usb1-201ENSMUST00000034245 Samd13D3YUG0 102 aa9.58□□□□□ -0.88
Usb1-201ENSMUST00000034245 Gm19935A0A1B0GSF9 52 aa9.57□□□□□ -0.88
Usb1-201ENSMUST00000034245 Igkv3-3A0A140T8Q0 119 aa9.55□□□□□ -0.88
Usb1-201ENSMUST00000034245 Cypt15B1AXS0 87 aa9.55□□□□□ -0.88
Usb1-201ENSMUST00000034245 A0A286YE49 62 aa9.54□□□□□ -0.88
Usb1-201ENSMUST00000034245 A530084C06RikQ3UTW2 186 aa9.52□□□□□ -0.88
Usb1-201ENSMUST00000034245 Fat3Q8BNA6 4555 aa9.52□□□□□ -0.88
Usb1-201ENSMUST00000034245 Lrp1Q91ZX7 4545 aaKnown RBP9.49□□□□□ -0.89
Usb1-201ENSMUST00000034245 Smlr1J3QMJ4 66 aa9.47□□□□□ -0.89
Usb1-201ENSMUST00000034245 Coa6Q8BGD8 79 aa9.45□□□□□ -0.9
Usb1-201ENSMUST00000034245 Rps28P62858 69 aaKnown RBP9.45□□□□□ -0.9
Usb1-201ENSMUST00000034245 Herc2Q4U2R1 4836 aa9.44□□□□□ -0.9
Usb1-201ENSMUST00000034245 Abca13Q5SSE9 5034 aa9.43□□□□□ -0.9
Usb1-201ENSMUST00000034245 Spint4Q9D263 159 aa9.42□□□□□ -0.9
Usb1-201ENSMUST00000034245 Atox1O08997 68 aaKnown RBP9.41□□□□□ -0.9
Usb1-201ENSMUST00000034245 1700074P13RikQ9D9G7 251 aa9.41□□□□□ -0.9
Usb1-201ENSMUST00000034245 Birc6O88738 4882 aa9.4□□□□□ -0.9
Usb1-201ENSMUST00000034245 Pet100P0DJE0 76 aa9.4□□□□□ -0.91
Usb1-201ENSMUST00000034245 Defb13Q8R2I4 64 aa9.4□□□□□ -0.91
Usb1-201ENSMUST00000034245 Dnhd1D3Z2X2 4750 aa9.38□□□□□ -0.91
Usb1-201ENSMUST00000034245 Gm9736A0A1W2P7N1 277 aa9.37□□□□□ -0.91
Usb1-201ENSMUST00000034245 SnurfQ9WU12 71 aa9.37□□□□□ -0.91
Usb1-201ENSMUST00000034245 Kiaa1109A2AAE1 5005 aa9.36□□□□□ -0.91
Usb1-201ENSMUST00000034245 Gm26620Q9CY65 116 aa9.35□□□□□ -0.91
Usb1-201ENSMUST00000034245 Serp1Q9Z1W5 66 aa9.34□□□□□ -0.91
Usb1-201ENSMUST00000034245 Gm10267M0QWD8 85 aa9.33□□□□□ -0.92
Usb1-201ENSMUST00000034245 Gm11939A2A592 99 aa9.28□□□□□ -0.92
Usb1-201ENSMUST00000034245 Brk1Q91VR8 75 aa9.28□□□□□ -0.92
Usb1-201ENSMUST00000034245 Coa5Q99M07 74 aa9.25□□□□□ -0.93
Usb1-201ENSMUST00000034245 Gm5767A0A0J9YTU8 78 aa9.22□□□□□ -0.93
Usb1-201ENSMUST00000034245 Gm5965D3Z724 196 aa9.2□□□□□ -0.94
Usb1-201ENSMUST00000034245 SvipQ3UZP4 77 aa9.2□□□□□ -0.94
Usb1-201ENSMUST00000034245 Cdc42se1Q8BHL7 80 aa9.19□□□□□ -0.94
Usb1-201ENSMUST00000034245 Chtf8P0CG14 533 aa9.19□□□□□ -0.94
Usb1-201ENSMUST00000034245 Mycbp2Q7TPH6 4711 aa9.16□□□□□ -0.94
Usb1-201ENSMUST00000034245 H2al1aQ5M8Q2 105 aa9.13□□□□□ -0.95
Usb1-201ENSMUST00000034245 Gm10160F6Y577 67 aa9.12□□□□□ -0.95
Usb1-201ENSMUST00000034245 HydinQ80W93 5154 aa9.1□□□□□ -0.95
Usb1-201ENSMUST00000034245 Lce1mQ9CR91 182 aa9.08□□□□□ -0.96
Usb1-201ENSMUST00000034245 Krtap3-2Q9D638 99 aa9.04□□□□□ -0.96
Usb1-201ENSMUST00000034245 Krtap3-3Q9D7P0 99 aa9.04□□□□□ -0.96
Usb1-201ENSMUST00000034245 Gm10197F6QEY5 67 aa9.04□□□□□ -0.96
Usb1-201ENSMUST00000034245 Gm9821Q8K076 103 aa9.03□□□□□ -0.96
Usb1-201ENSMUST00000034245 Krtap15-1Q9QZU5 150 aa9.01□□□□□ -0.97
Usb1-201ENSMUST00000034245 Defb38Q7TNV7 63 aa8.99□□□□□ -0.97
Usb1-201ENSMUST00000034245 Gm10643Q3URG9 111 aa8.99□□□□□ -0.97
Usb1-201ENSMUST00000034245 Rpl37Q9D823 97 aa8.97□□□□□ -0.97
Usb1-201ENSMUST00000034245 PcloQ9QYX7 5068 aa8.96□□□□□ -0.98
Usb1-201ENSMUST00000034245 A930033H14RikG5E8X6 103 aa8.95□□□□□ -0.98
Usb1-201ENSMUST00000034245 Phxr4P15974 95 aa8.94□□□□□ -0.98
Usb1-201ENSMUST00000034245 Lrp2A2ARV4 4660 aa8.93□□□□□ -0.98
Usb1-201ENSMUST00000034245 Gm4491E0CX42 125 aa8.93□□□□□ -0.98
Usb1-201ENSMUST00000034245 Gm10999F6Q4M4 69 aa8.93□□□□□ -0.98
Usb1-201ENSMUST00000034245 Gm21798J3QNU5 87 aa8.92□□□□□ -0.98
Usb1-201ENSMUST00000034245 Q8BGJ3 129 aa8.92□□□□□ -0.98
Usb1-201ENSMUST00000034245 Rnase13Q5GAM7 153 aa8.86□□□□□ -0.99
Usb1-201ENSMUST00000034245 Gm20661K7N787 53 aa8.83□□□□□ -1
Usb1-201ENSMUST00000034245 Gm10337F7DEP7 55 aa8.82□□□□□ -1
Usb1-201ENSMUST00000034245 2310034C09RikQ9D746 214 aa8.82□□□□□ -1
Usb1-201ENSMUST00000034245 H2al1eQ810S6 105 aa8.81□□□□□ -1
Usb1-201ENSMUST00000034245 4930507D05RikQ8C9C9 103 aa8.8□□□□□ -1
Usb1-201ENSMUST00000034245 9230102O04RikA2ASX7 82 aa8.76□□□□□ -1.01
Usb1-201ENSMUST00000034245 Sec61bQ9CQS8 96 aaKnown RBP8.76□□□□□ -1.01
Usb1-201ENSMUST00000034245 H2al1bA0A087WP11 105 aa8.76□□□□□ -1.01
Usb1-201ENSMUST00000034245 H2al1kJ3QP08 105 aa8.76□□□□□ -1.01
Usb1-201ENSMUST00000034245 H2al1mQ9DAD9 105 aa8.76□□□□□ -1.01
Usb1-201ENSMUST00000034245 2310079G19RikQ9D6L6 185 aa8.74□□□□□ -1.01
Usb1-201ENSMUST00000034245 Herc1E9PZP8 4859 aa8.7□□□□□ -1.02
Usb1-201ENSMUST00000034245 Gm18596A0A1W2P860 280 aa8.7□□□□□ -1.02
Usb1-201ENSMUST00000034245 Ndufb1P0DN34 57 aa8.68□□□□□ -1.02
Usb1-201ENSMUST00000034245 Sox16Q62247 57 aa8.68□□□□□ -1.02
Usb1-201ENSMUST00000034245 Gm17416Q30KP4 66 aa8.66□□□□□ -1.02
Usb1-201ENSMUST00000034245 Uqcr11Q9CPX8 56 aa8.64□□□□□ -1.03
Usb1-201ENSMUST00000034245 Limd2Q8BGB5 128 aa8.63□□□□□ -1.03
Usb1-201ENSMUST00000034245 2310057N15RikQ9D6T8 200 aa8.62□□□□□ -1.03
Usb1-201ENSMUST00000034245 4933415A04RikQ9D443 101 aa8.6□□□□□ -1.03
Usb1-201ENSMUST00000034245 SptssbQ925E8 76 aa8.56□□□□□ -1.04
Usb1-201ENSMUST00000034245 Defb1P56386 69 aa8.54□□□□□ -1.04
Usb1-201ENSMUST00000034245 Prm1P02319 51 aa8.5□□□□□ -1.05
Usb1-201ENSMUST00000034245 Gm9789Q8BIG3 52 aa8.46□□□□□ -1.05
Retrieved 100 of 22,080 RNA–protein pairs in 135.5 ms