RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 NischQ80TM9 1593 aa35.25■■■■□ 3.23
Usb1-201ENSMUST00000034245 Gm35339A0A140LHH9 1649 aa35.22■■■■□ 3.23
Usb1-201ENSMUST00000034245 Abcc9P70170 1546 aa34.18■■■■□ 3.06
Usb1-201ENSMUST00000034245 Abcc8B2RUS7 1588 aa33.8■■■■□ 3
Usb1-201ENSMUST00000034245 ScribQ80U72 1612 aa31.98■■■□□ 2.71
Usb1-201ENSMUST00000034245 Rhox8Q6VSS7 320 aa31.48■■■□□ 2.63
Usb1-201ENSMUST00000034245 Dcaf1Q80TR8 1506 aa31.42■■■□□ 2.62
Usb1-201ENSMUST00000034245 NacadQ5SWP3 1504 aa31.22■■■□□ 2.59
Usb1-201ENSMUST00000034245 Kdm5dQ62240 1548 aa31.2■■■□□ 2.59
Usb1-201ENSMUST00000034245 Rb1cc1Q9ESK9 1588 aa30.78■■■□□ 2.52
Usb1-201ENSMUST00000034245 Sycp2Q9CUU3 1500 aa30.54■■■□□ 2.48
Usb1-201ENSMUST00000034245 Ccdc180J3QNE4 1664 aa30.48■■■□□ 2.47
Usb1-201ENSMUST00000034245 Baz1aO88379 1555 aa30.43■■■□□ 2.46
Usb1-201ENSMUST00000034245 Crybg2B7ZCC2 1516 aa30.22■■■□□ 2.43
Usb1-201ENSMUST00000034245 Rtl1Q7M732 1744 aa30.02■■■□□ 2.4
Usb1-201ENSMUST00000034245 BicraF8VPZ9 1578 aa29.91■■■□□ 2.38
Usb1-201ENSMUST00000034245 Zcchc6Q5BLK4 1491 aaKnown RBP29.88■■■□□ 2.37
Usb1-201ENSMUST00000034245 Smarca2Q6DIC0 1577 aa29.61■■■□□ 2.33
Usb1-201ENSMUST00000034245 Ccdc136Q3TVA9 1136 aa29.29■■■□□ 2.28
Usb1-201ENSMUST00000034245 Cecr2E9Q2Z1 1453 aa29.15■■■□□ 2.26
Usb1-201ENSMUST00000034245 Pds5bQ4VA53 1446 aaKnown RBP29.01■■■□□ 2.23
Usb1-201ENSMUST00000034245 Smarca4Q3TKT4 1613 aaKnown RBP28.97■■■□□ 2.23
Usb1-201ENSMUST00000034245 Brd4Q9ESU6 1400 aaKnown RBP28.95■■■□□ 2.22
Usb1-201ENSMUST00000034245 Trim41Q5NCC3 630 aa28.94■■■□□ 2.22
Usb1-201ENSMUST00000034245 Atad2bE9Q166 1460 aaKnown RBP28.9■■■□□ 2.22
Usb1-201ENSMUST00000034245 CftrP26361 1476 aa28.7■■■□□ 2.18
Usb1-201ENSMUST00000034245 Iqgap2Q3UQ44 1575 aa28.69■■■□□ 2.18
Usb1-201ENSMUST00000034245 Synj1Q8CHC4 1574 aa28.68■■■□□ 2.18
Usb1-201ENSMUST00000034245 Cttnbp2B9EJA2 1648 aa28.6■■■□□ 2.17
Usb1-201ENSMUST00000034245 Ercc6F8VPZ5 1481 aa28.43■■■□□ 2.14
Usb1-201ENSMUST00000034245 Esf1Q3V1V3 845 aaKnown RBP28.38■■■□□ 2.13
Usb1-201ENSMUST00000034245 Thoc2B1AZI6 1594 aaKnown RBP28.31■■■□□ 2.12
Usb1-201ENSMUST00000034245 Wdr62Q3U3T8 1523 aa28.29■■■□□ 2.12
Usb1-201ENSMUST00000034245 Frmpd1A2AKB4 1549 aa28.27■■■□□ 2.12
Usb1-201ENSMUST00000034245 Golga3P55937 1487 aa28.21■■■□□ 2.11
Usb1-201ENSMUST00000034245 Cngb1E1AZ71 1325 aa28.15■■■□□ 2.1
Usb1-201ENSMUST00000034245 HrcG5E8J6 738 aa28.1■■■□□ 2.09
Usb1-201ENSMUST00000034245 Phldb1Q6PDH0 1371 aaKnown RBP27.97■■■□□ 2.07
Usb1-201ENSMUST00000034245 Top2bQ64511 1612 aa27.97■■■□□ 2.07
Usb1-201ENSMUST00000034245 Cc2d2aQ8CFW7 1633 aa27.93■■■□□ 2.06
Usb1-201ENSMUST00000034245 Fam135aQ6NS59 1506 aa27.88■■■□□ 2.05
Usb1-201ENSMUST00000034245 Dnajc5bQ9CQ94 199 aa27.81■■■□□ 2.04
Usb1-201ENSMUST00000034245 Unc13aQ4KUS2 1712 aa27.78■■■□□ 2.04
Usb1-201ENSMUST00000034245 Rsf1E9PWW9 1441 aaKnown RBP27.76■■■□□ 2.03
Usb1-201ENSMUST00000034245 Ubl4bQ9CQ84 188 aa27.72■■■□□ 2.03
Usb1-201ENSMUST00000034245 Fmn1Q05860 1466 aa27.71■■■□□ 2.03
Usb1-201ENSMUST00000034245 Baz1bQ9Z277 1479 aa27.66■■■□□ 2.02
Usb1-201ENSMUST00000034245 Ccdc88bQ4QRL3 1481 aa27.64■■■□□ 2.02
Usb1-201ENSMUST00000034245 Kif15Q6P9L6 1387 aa27.63■■■□□ 2.01
Usb1-201ENSMUST00000034245 Lamc3Q9R0B6 1581 aa27.63■■■□□ 2.01
Usb1-201ENSMUST00000034245 Cep164Q5DU05 1446 aa27.6■■■□□ 2.01
Usb1-201ENSMUST00000034245 Chic1Q8CBW7 227 aa27.6■■■□□ 2.01
Usb1-201ENSMUST00000034245 TnnQ80Z71 1560 aa27.55■■■□□ 2
Usb1-201ENSMUST00000034245 Cux2P70298 1426 aa27.39■■□□□ 1.98
Usb1-201ENSMUST00000034245 Top2aQ01320 1528 aaKnown RBP27.31■■□□□ 1.96
Usb1-201ENSMUST00000034245 Ccdc18Q640L5 1455 aa27.31■■□□□ 1.96
Usb1-201ENSMUST00000034245 Mrc2Q64449 1479 aa27.3■■□□□ 1.96
Usb1-201ENSMUST00000034245 Npm1Q61937 292 aaKnown RBP27.25■■□□□ 1.95
Usb1-201ENSMUST00000034245 Camsap1A2AHC3 1581 aa27.23■■□□□ 1.95
Usb1-201ENSMUST00000034245 Il27Q8K3I6 234 aa27.22■■□□□ 1.95
Usb1-201ENSMUST00000034245 Gab3Q8BSM5 595 aa27.14■■□□□ 1.93
Usb1-201ENSMUST00000034245 LrpprcQ6PB66 1392 aaKnown RBP27.01■■□□□ 1.91
Usb1-201ENSMUST00000034245 Grin2bQ01097 1482 aa26.98■■□□□ 1.91
Usb1-201ENSMUST00000034245 NrkQ9R0G8 1455 aa26.94■■□□□ 1.9
Usb1-201ENSMUST00000034245 PogzQ8BZH4 1409 aaKnown RBP26.9■■□□□ 1.9
Usb1-201ENSMUST00000034245 Rapgef2Q8CHG7 1496 aa26.89■■□□□ 1.9
Usb1-201ENSMUST00000034245 Dhx29Q6PGC1 1365 aaKnown RBP26.88■■□□□ 1.89
Usb1-201ENSMUST00000034245 Kif21aQ9QXL2 1672 aa26.87■■□□□ 1.89
Usb1-201ENSMUST00000034245 Npm2Q80W85 207 aa26.86■■□□□ 1.89
Usb1-201ENSMUST00000034245 Shroom4Q1W617 1475 aa26.84■■□□□ 1.89
Usb1-201ENSMUST00000034245 Efcab5A0JP43 1406 aa26.81■■□□□ 1.88
Usb1-201ENSMUST00000034245 Duox2A2AQ99 1517 aa26.79■■□□□ 1.88
Usb1-201ENSMUST00000034245 PtprkP35822 1457 aa26.79■■□□□ 1.88
Usb1-201ENSMUST00000034245 Crocc2F6XLV1 1638 aa26.71■■□□□ 1.87
Usb1-201ENSMUST00000034245 Cep162Q6ZQ06 1403 aa26.7■■□□□ 1.87
Usb1-201ENSMUST00000034245 Zeb1Q64318 1117 aa26.6■■□□□ 1.85
Usb1-201ENSMUST00000034245 Plb1Q3TTY0 1478 aa26.59■■□□□ 1.85
Usb1-201ENSMUST00000034245 Arhgap35Q91YM2 1499 aa26.56■■□□□ 1.84
Usb1-201ENSMUST00000034245 Lrriq1Q0P5X1 1673 aa26.55■■□□□ 1.84
Usb1-201ENSMUST00000034245 Eif4g1Q6NZJ6 1600 aaKnown RBP26.55■■□□□ 1.84
Usb1-201ENSMUST00000034245 Urb2E9Q7L1 1524 aaKnown RBP26.54■■□□□ 1.84
Usb1-201ENSMUST00000034245 Myt1lP97500 1187 aa26.53■■□□□ 1.84
Usb1-201ENSMUST00000034245 Samd9lQ69Z37 1561 aa26.52■■□□□ 1.84
Usb1-201ENSMUST00000034245 Mroh2bQ7M6Y6 1581 aa26.52■■□□□ 1.84
Usb1-201ENSMUST00000034245 Map3k1P53349 1493 aa26.51■■□□□ 1.83
Usb1-201ENSMUST00000034245 Ift140E9PY46 1464 aa26.44■■□□□ 1.82
Usb1-201ENSMUST00000034245 SynmQ70IV5 1561 aa26.41■■□□□ 1.82
Usb1-201ENSMUST00000034245 Rad54l2Q99NG0 1466 aa26.38■■□□□ 1.81
Usb1-201ENSMUST00000034245 Clip1Q922J3 1391 aa26.37■■□□□ 1.81
Usb1-201ENSMUST00000034245 AqrQ8CFQ3 1481 aaKnown RBP26.36■■□□□ 1.81
Usb1-201ENSMUST00000034245 Disp1Q3TDN0 1521 aa26.35■■□□□ 1.81
Usb1-201ENSMUST00000034245 Carmil1Q6EDY6 1374 aa26.33■■□□□ 1.81
Usb1-201ENSMUST00000034245 Magi3Q9EQJ9 1476 aa26.25■■□□□ 1.79
Usb1-201ENSMUST00000034245 Grin2aP35436 1464 aa26.25■■□□□ 1.79
Usb1-201ENSMUST00000034245 Pbrm1Q8BSQ9 1634 aaKnown RBP26.24■■□□□ 1.79
Usb1-201ENSMUST00000034245 Nup160Q9Z0W3 1402 aaKnown RBP26.22■■□□□ 1.79
Usb1-201ENSMUST00000034245 Eif4g3Q80XI3 1579 aaKnown RBP26.21■■□□□ 1.79
Usb1-201ENSMUST00000034245 Pla2r1Q62028 1487 aa26.2■■□□□ 1.79
Usb1-201ENSMUST00000034245 Cc2d2bA0A286YDU8 1405 aa26.17■■□□□ 1.78
Usb1-201ENSMUST00000034245 Eea1Q8BL66 1411 aa26.13■■□□□ 1.77
Retrieved 100 of 22,080 RNA–protein pairs in 29.9 ms