RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 TTBK1Q5TCY1 1321 aaPredicted RBP43.04■■■■■ 4.48
FMR1-219ENST00000621453 FHAD1B1AJZ9 1412 aa43.03■■■■■ 4.48
FMR1-219ENST00000621453 ADAMTS12P58397 1594 aa43.03■■■■■ 4.48
FMR1-219ENST00000621453 EIF4G3O43432 1585 aaKnown RBP42.98■■■■■ 4.47
FMR1-219ENST00000621453 EFCAB5A4FU69 1503 aa42.93■■■■■ 4.46
FMR1-219ENST00000621453 HRCP23327 699 aa42.92■■■■■ 4.46
FMR1-219ENST00000621453 SNAPC4Q5SXM2 1469 aa42.79■■■■■ 4.44
FMR1-219ENST00000621453 P3H3Q8IVL6 736 aa42.73■■■■■ 4.43
FMR1-219ENST00000621453 FHOD3Q2V2M9 1422 aa42.73■■■■■ 4.43
FMR1-219ENST00000621453 SAMD9Q5K651 1589 aa42.72■■■■■ 4.43
FMR1-219ENST00000621453 MAGI1Q96QZ7 1491 aaPredicted RBP42.69■■■■■ 4.42
FMR1-219ENST00000621453 IQGAP2Q13576 1575 aa42.63■■■■■ 4.42
FMR1-219ENST00000621453 PCF11O94913 1555 aaKnown RBP42.62■■■■■ 4.41
FMR1-219ENST00000621453 MAP3K1Q13233 1512 aa42.62■■■■■ 4.41
FMR1-219ENST00000621453 KANK4Q5T7N3 995 aaPredicted RBP42.6■■■■■ 4.41
FMR1-219ENST00000621453 GRIN2AQ12879 1464 aa42.59■■■■■ 4.41
FMR1-219ENST00000621453 TIAM1Q13009 1591 aa42.56■■■■■ 4.4
FMR1-219ENST00000621453 FMN1Q68DA7 1419 aa42.55■■■■■ 4.4
FMR1-219ENST00000621453 SYNJ2O15056 1496 aa42.53■■■■■ 4.4
FMR1-219ENST00000621453 FYCO1Q9BQS8 1478 aa42.52■■■■■ 4.4
FMR1-219ENST00000621453 CASKIN1Q8WXD9 1431 aa42.5■■■■■ 4.39
FMR1-219ENST00000621453 KIAA0586Q9BVV6 1533 aa42.46■■■■■ 4.39
FMR1-219ENST00000621453 CFAP43Q8NDM7 1665 aa42.46■■■■■ 4.39
FMR1-219ENST00000621453 CHMP7Q8WUX9 453 aaPredicted RBP42.43■■■■■ 4.38
FMR1-219ENST00000621453 UGGT2Q9NYU1 1516 aa42.42■■■■■ 4.38
FMR1-219ENST00000621453 LRRC9Q6ZRR7 1453 aa42.36■■■■■ 4.37
FMR1-219ENST00000621453 ATP1B4Q9UN42 357 aaPredicted RBP42.34■■■■■ 4.37
FMR1-219ENST00000621453 CEP170Q5SW79 1584 aa42.33■■■■■ 4.37
FMR1-219ENST00000621453 FBLN2P98095 1184 aa42.28■■■■■ 4.36
FMR1-219ENST00000621453 NUP160Q12769 1436 aa42.24■■■■■ 4.35
FMR1-219ENST00000621453 RRBP1Q9P2E9 1410 aaKnown RBP42.22■■■■■ 4.35
FMR1-219ENST00000621453 KIAA0556O60303 1618 aa42.21■■■■■ 4.35
FMR1-219ENST00000621453 ZEB1P37275 1124 aaPredicted RBP42.21■■■■■ 4.35
FMR1-219ENST00000621453 DISP1Q96F81 1524 aa42.18■■■■■ 4.34
FMR1-219ENST00000621453 LRRIQ1Q96JM4 1722 aa42.18■■■■■ 4.34
FMR1-219ENST00000621453 HNRNPUL2Q1KMD3 747 aaKnown RBP42.15■■■■■ 4.34
FMR1-219ENST00000621453 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP42.11■■■■■ 4.33
FMR1-219ENST00000621453 HECW1Q76N89 1606 aa42.09■■■■■ 4.33
FMR1-219ENST00000621453 CCNB3Q8WWL7 1395 aa42.06■■■■■ 4.32
FMR1-219ENST00000621453 CCDC18Q5T9S5 1454 aa42.02■■■■■ 4.32
FMR1-219ENST00000621453 CCER1Q8TC90 406 aaPredicted RBP42■■■■■ 4.31
FMR1-219ENST00000621453 PHLDB1Q86UU1 1377 aa42■■■■■ 4.31
FMR1-219ENST00000621453 CHD1O14646 1710 aa42■■■■■ 4.31
FMR1-219ENST00000621453 JPH4Q96JJ6 628 aa41.96■■■■■ 4.31
FMR1-219ENST00000621453 MTUS2Q5JR59 1369 aa41.96■■■■■ 4.31
FMR1-219ENST00000621453 CARMIL2Q6F5E8 1435 aa41.92■■■■■ 4.3
FMR1-219ENST00000621453 EPRSP07814 1512 aaKnown RBP41.91■■■■■ 4.3
FMR1-219ENST00000621453 EHBP1L1Q8N3D4 1523 aa41.89■■■■■ 4.3
FMR1-219ENST00000621453 RAPGEF6Q8TEU7 1601 aa41.85■■■■■ 4.29
FMR1-219ENST00000621453 SUPT6HQ7KZ85 1726 aaKnown RBP41.82■■■■■ 4.28
FMR1-219ENST00000621453 MAGI3Q5TCQ9 1506 aa41.8■■■■■ 4.28
FMR1-219ENST00000621453 CDK13Q14004 1512 aaKnown RBP41.79■■■■■ 4.28
FMR1-219ENST00000621453 NCOA2Q15596 1464 aa41.75■■■■■ 4.27
FMR1-219ENST00000621453 NUP153P49790 1475 aaKnown RBP41.74■■■■■ 4.27
FMR1-219ENST00000621453 ARHGEF11O15085 1522 aa41.67■■■■■ 4.26
FMR1-219ENST00000621453 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.67■■■■■ 4.26
FMR1-219ENST00000621453 FGD6Q6ZV73 1430 aa41.66■■■■■ 4.26
FMR1-219ENST00000621453 PRG4Q92954 1404 aaPredicted RBP41.65■■■■■ 4.26
FMR1-219ENST00000621453 PLB1Q6P1J6 1458 aa41.65■■■■■ 4.26
FMR1-219ENST00000621453 FAM50AQ14320 339 aaKnown RBP41.65■■■■■ 4.26
FMR1-219ENST00000621453 ITGAEP38570 1179 aa41.64■■■■■ 4.26
FMR1-219ENST00000621453 SHROOM2Q13796 1616 aa41.63■■■■■ 4.25
FMR1-219ENST00000621453 ARID3CA6NKF2 412 aa41.62■■■■■ 4.25
FMR1-219ENST00000621453 MYOM3Q5VTT5 1437 aa41.62■■■■■ 4.25
FMR1-219ENST00000621453 ABCA8O94911 1581 aa41.54■■■■■ 4.24
FMR1-219ENST00000621453 CDK11AQ9UQ88 783 aaPredicted RBP41.49■■■■■ 4.23
FMR1-219ENST00000621453 CLASP1Q7Z460 1538 aa41.47■■■■■ 4.23
FMR1-219ENST00000621453 PTPRGP23470 1445 aa41.44■■■■■ 4.22
FMR1-219ENST00000621453 PTPN23Q9H3S7 1636 aa41.43■■■■■ 4.22
FMR1-219ENST00000621453 TROQ12816 1431 aaPredicted RBP41.37■■■■■ 4.21
FMR1-219ENST00000621453 DHX57Q6P158 1386 aaKnown RBP41.36■■■■■ 4.21
FMR1-219ENST00000621453 SETD5Q9C0A6 1442 aa41.35■■■■■ 4.21
FMR1-219ENST00000621453 TCOF1Q13428 1488 aaKnown RBP41.35■■■■■ 4.21
FMR1-219ENST00000621453 MIA2Q96PC5 1412 aa41.34■■■■■ 4.21
FMR1-219ENST00000621453 RAB3GAP2Q9H2M9 1393 aa41.34■■■■■ 4.21
FMR1-219ENST00000621453 ERCC6L2Q5T890 1561 aa41.31■■■■■ 4.2
FMR1-219ENST00000621453 ATP10BO94823 1461 aa41.29■■■■■ 4.2
FMR1-219ENST00000621453 ADCY10Q96PN6 1610 aa41.29■■■■■ 4.2
FMR1-219ENST00000621453 CLSPNQ9HAW4 1339 aa41.26■■■■■ 4.19
FMR1-219ENST00000621453 UACAQ9BZF9 1416 aa41.22■■■■■ 4.19
FMR1-219ENST00000621453 PTPRKQ15262 1439 aa41.21■■■■■ 4.19
FMR1-219ENST00000621453 KIF14Q15058 1648 aa41.18■■■■■ 4.18
FMR1-219ENST00000621453 PLEKHD1A6NEE1 506 aa41.17■■■■■ 4.18
FMR1-219ENST00000621453 ITSN2Q9NZM3 1697 aa41.13■■■■■ 4.18
FMR1-219ENST00000621453 HFM1A2PYH4 1435 aa41.1■■■■■ 4.17
FMR1-219ENST00000621453 ABCC2Q92887 1545 aa41.09■■■■■ 4.17
FMR1-219ENST00000621453 GPATCH8Q9UKJ3 1502 aaKnown RBP41.05■■■■■ 4.16
FMR1-219ENST00000621453 NAIPQ13075 1403 aa40.99■■■■■ 4.15
FMR1-219ENST00000621453 ABCC10Q5T3U5 1492 aa40.99■■■■■ 4.15
FMR1-219ENST00000621453 DNMT1P26358 1616 aaKnown RBP40.97■■■■■ 4.15
FMR1-219ENST00000621453 CFDP1Q9UEE9 299 aaPredicted RBP40.96■■■■■ 4.15
FMR1-219ENST00000621453 CDC42BPAQ5VT25 1732 aa40.95■■■■■ 4.15
FMR1-219ENST00000621453 AKNAQ7Z591 1439 aa40.93■■■■■ 4.14
FMR1-219ENST00000621453 UHRF1BP1LA0JNW5 1464 aa40.93■■■■■ 4.14
FMR1-219ENST00000621453 MAPKBP1O60336 1514 aa40.92■■■■■ 4.14
FMR1-219ENST00000621453 DAPK1P53355 1430 aa40.92■■■■■ 4.14
FMR1-219ENST00000621453 CAMSAP2Q08AD1 1489 aa40.92■■■■■ 4.14
FMR1-219ENST00000621453 ZNF644Q9H582 1327 aaPredicted RBP40.92■■■■■ 4.14
FMR1-219ENST00000621453 GCC2Q8IWJ2 1684 aa40.92■■■■■ 4.14
FMR1-219ENST00000621453 CHIC2Q9UKJ5 165 aa40.89■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms