RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
COPS7B-224ENST00000620578 ARAP1Q96P48 1450 aa23.93■■□□□ 1.42
COPS7B-224ENST00000620578 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
COPS7B-224ENST00000620578 PCGF6Q9BYE7 350 aa23.88■■□□□ 1.41
COPS7B-224ENST00000620578 GRIN2AQ12879 1464 aa23.83■■□□□ 1.4
COPS7B-224ENST00000620578 MAGI1Q96QZ7 1491 aaPredicted RBP23.82■■□□□ 1.4
COPS7B-224ENST00000620578 VPS8Q8N3P4 1428 aa23.81■■□□□ 1.4
COPS7B-224ENST00000620578 FHOD3Q2V2M9 1422 aa23.81■■□□□ 1.4
COPS7B-224ENST00000620578 CTTNBP2Q8WZ74 1663 aa23.81■■□□□ 1.4
COPS7B-224ENST00000620578 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
COPS7B-224ENST00000620578 ATP1B4Q9UN42 357 aaPredicted RBP23.77■■□□□ 1.4
COPS7B-224ENST00000620578 CEP170Q5SW79 1584 aa23.72■■□□□ 1.39
COPS7B-224ENST00000620578 IQGAP2Q13576 1575 aa23.68■■□□□ 1.38
COPS7B-224ENST00000620578 KANK4Q5T7N3 995 aaPredicted RBP23.67■■□□□ 1.38
COPS7B-224ENST00000620578 APLP2Q06481 763 aa23.66■■□□□ 1.38
COPS7B-224ENST00000620578 TRIM26Q12899 539 aaPredicted RBP23.66■■□□□ 1.38
COPS7B-224ENST00000620578 KIAA0586Q9BVV6 1533 aa23.65■■□□□ 1.38
COPS7B-224ENST00000620578 JPH4Q96JJ6 628 aa23.64■■□□□ 1.37
COPS7B-224ENST00000620578 ARID3CA6NKF2 412 aa23.63■■□□□ 1.37
COPS7B-224ENST00000620578 CHD1O14646 1710 aa23.63■■□□□ 1.37
COPS7B-224ENST00000620578 NUP160Q12769 1436 aa23.62■■□□□ 1.37
COPS7B-224ENST00000620578 SAMD9Q5K651 1589 aa23.58■■□□□ 1.37
COPS7B-224ENST00000620578 EFCAB5A4FU69 1503 aa23.57■■□□□ 1.36
COPS7B-224ENST00000620578 DISP1Q96F81 1524 aa23.55■■□□□ 1.36
COPS7B-224ENST00000620578 PCF11O94913 1555 aaKnown RBP23.53■■□□□ 1.36
COPS7B-224ENST00000620578 UGGT2Q9NYU1 1516 aa23.52■■□□□ 1.36
COPS7B-224ENST00000620578 FMN1Q68DA7 1419 aa23.46■■□□□ 1.35
COPS7B-224ENST00000620578 KIAA0556O60303 1618 aa23.45■■□□□ 1.34
COPS7B-224ENST00000620578 PRG4Q92954 1404 aaPredicted RBP23.43■■□□□ 1.34
COPS7B-224ENST00000620578 CASKIN1Q8WXD9 1431 aa23.43■■□□□ 1.34
COPS7B-224ENST00000620578 ERCC6L2Q5T890 1561 aa23.39■■□□□ 1.34
COPS7B-224ENST00000620578 FYCO1Q9BQS8 1478 aa23.37■■□□□ 1.33
COPS7B-224ENST00000620578 TIAM1Q13009 1591 aa23.37■■□□□ 1.33
COPS7B-224ENST00000620578 PLB1Q6P1J6 1458 aa23.36■■□□□ 1.33
COPS7B-224ENST00000620578 LRRIQ1Q96JM4 1722 aa23.36■■□□□ 1.33
COPS7B-224ENST00000620578 CARMIL2Q6F5E8 1435 aa23.35■■□□□ 1.33
COPS7B-224ENST00000620578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.33■■□□□ 1.33
COPS7B-224ENST00000620578 HNRNPUL2Q1KMD3 747 aaKnown RBP23.33■■□□□ 1.33
COPS7B-224ENST00000620578 LRRC9Q6ZRR7 1453 aa23.31■■□□□ 1.32
COPS7B-224ENST00000620578 CDK13Q14004 1512 aaKnown RBP23.31■■□□□ 1.32
COPS7B-224ENST00000620578 OSCARQ8IYS5 282 aa23.3■■□□□ 1.32
COPS7B-224ENST00000620578 CLASP1Q7Z460 1538 aa23.27■■□□□ 1.32
COPS7B-224ENST00000620578 PTPRGP23470 1445 aa23.26■■□□□ 1.31
COPS7B-224ENST00000620578 NUP153P49790 1475 aaKnown RBP23.25■■□□□ 1.31
COPS7B-224ENST00000620578 EPRSP07814 1512 aaKnown RBP23.24■■□□□ 1.31
COPS7B-224ENST00000620578 MTUS2Q5JR59 1369 aa23.24■■□□□ 1.31
COPS7B-224ENST00000620578 PHLDB1Q86UU1 1377 aa23.24■■□□□ 1.31
COPS7B-224ENST00000620578 MAGI3Q5TCQ9 1506 aa23.23■■□□□ 1.31
COPS7B-224ENST00000620578 SHROOM2Q13796 1616 aa23.22■■□□□ 1.31
COPS7B-224ENST00000620578 CFAP43Q8NDM7 1665 aa23.22■■□□□ 1.31
COPS7B-224ENST00000620578 ITGAEP38570 1179 aa23.21■■□□□ 1.31
COPS7B-224ENST00000620578 MAP3K1Q13233 1512 aa23.21■■□□□ 1.31
COPS7B-224ENST00000620578 RAPGEF6Q8TEU7 1601 aa23.2■■□□□ 1.3
COPS7B-224ENST00000620578 HECW1Q76N89 1606 aa23.19■■□□□ 1.3
COPS7B-224ENST00000620578 FAM50AQ14320 339 aaKnown RBP23.12■■□□□ 1.29
COPS7B-224ENST00000620578 ABCA8O94911 1581 aa23.1■■□□□ 1.29
COPS7B-224ENST00000620578 CCDC18Q5T9S5 1454 aa23.1■■□□□ 1.29
COPS7B-224ENST00000620578 ATP10BO94823 1461 aa23.09■■□□□ 1.29
COPS7B-224ENST00000620578 CCNB3Q8WWL7 1395 aa23.08■■□□□ 1.29
COPS7B-224ENST00000620578 NCOA2Q15596 1464 aa23.08■■□□□ 1.28
COPS7B-224ENST00000620578 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
COPS7B-224ENST00000620578 RRBP1Q9P2E9 1410 aaKnown RBP23.05■■□□□ 1.28
COPS7B-224ENST00000620578 CDK11AQ9UQ88 783 aaPredicted RBP23.01■■□□□ 1.27
COPS7B-224ENST00000620578 PLEKHD1A6NEE1 506 aa23.01■■□□□ 1.27
COPS7B-224ENST00000620578 EHBP1L1Q8N3D4 1523 aa23■■□□□ 1.27
COPS7B-224ENST00000620578 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
COPS7B-224ENST00000620578 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
COPS7B-224ENST00000620578 ZNF644Q9H582 1327 aaPredicted RBP22.96■■□□□ 1.27
COPS7B-224ENST00000620578 FGD6Q6ZV73 1430 aa22.95■■□□□ 1.26
COPS7B-224ENST00000620578 TROQ12816 1431 aaPredicted RBP22.94■■□□□ 1.26
COPS7B-224ENST00000620578 MYOM3Q5VTT5 1437 aa22.93■■□□□ 1.26
COPS7B-224ENST00000620578 KIF14Q15058 1648 aa22.93■■□□□ 1.26
COPS7B-224ENST00000620578 ABCC2Q92887 1545 aa22.92■■□□□ 1.26
COPS7B-224ENST00000620578 ARHGEF11O15085 1522 aa22.91■■□□□ 1.26
COPS7B-224ENST00000620578 CYB5RLQ6IPT4 315 aa22.9■■□□□ 1.26
COPS7B-224ENST00000620578 ZNF777Q9ULD5 760 aaPredicted RBP22.9■■□□□ 1.26
COPS7B-224ENST00000620578 HRCP23327 699 aa22.89■■□□□ 1.25
COPS7B-224ENST00000620578 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
COPS7B-224ENST00000620578 CHIC2Q9UKJ5 165 aa22.86■■□□□ 1.25
COPS7B-224ENST00000620578 ADCY10Q96PN6 1610 aa22.86■■□□□ 1.25
COPS7B-224ENST00000620578 PTPRKQ15262 1439 aa22.84■■□□□ 1.25
COPS7B-224ENST00000620578 CFDP1Q9UEE9 299 aaPredicted RBP22.83■■□□□ 1.25
COPS7B-224ENST00000620578 ZCCHC11Q5TAX3 1644 aaKnown RBP22.81■■□□□ 1.24
COPS7B-224ENST00000620578 KDM5BQ9UGL1 1544 aa22.8■■□□□ 1.24
COPS7B-224ENST00000620578 GPATCH8Q9UKJ3 1502 aaKnown RBP22.8■■□□□ 1.24
COPS7B-224ENST00000620578 PTPN23Q9H3S7 1636 aa22.8■■□□□ 1.24
COPS7B-224ENST00000620578 UHRF1BP1LA0JNW5 1464 aa22.79■■□□□ 1.24
COPS7B-224ENST00000620578 ABCC10Q5T3U5 1492 aa22.76■■□□□ 1.23
COPS7B-224ENST00000620578 RRP7BPQ9NSQ0 103 aa22.75■■□□□ 1.23
COPS7B-224ENST00000620578 RIMBP3CA6NJZ7 1639 aa22.72■■□□□ 1.23
COPS7B-224ENST00000620578 RIMBP3BA6NNM3 1639 aa22.72■■□□□ 1.23
COPS7B-224ENST00000620578 RIMBP3Q9UFD9 1639 aa22.72■■□□□ 1.23
COPS7B-224ENST00000620578 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
COPS7B-224ENST00000620578 MIA2Q96PC5 1412 aa22.71■■□□□ 1.23
COPS7B-224ENST00000620578 RAB3GAP2Q9H2M9 1393 aa22.7■■□□□ 1.22
COPS7B-224ENST00000620578 HNRNPMP52272 730 aaKnown RBP eCLIP22.7■■□□□ 1.224e-7■■■■□ 19.8
COPS7B-224ENST00000620578 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.7■■□□□ 1.223e-6■■■■□ 26.4
COPS7B-224ENST00000620578 TTC37Q6PGP7 1564 aa22.69■■□□□ 1.22
COPS7B-224ENST00000620578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.69■■□□□ 1.22
COPS7B-224ENST00000620578 CDC42BPAQ5VT25 1732 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms