RNA–Protein interactions for RNA: ENST00000620578.4

COPS7B-224, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 2 BASIC

Gene COPS7B, Length 2,500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-224ENST00000620578 NISCHQ9Y2I1 1504 aa34.56■■■■□ 3.12
COPS7B-224ENST00000620578 CCDC180Q9P1Z9 1646 aa29.92■■■□□ 2.38
COPS7B-224ENST00000620578 DCAF8L2P0C7V8 631 aa29.11■■■□□ 2.25
COPS7B-224ENST00000620578 ZCCHC6Q5VYS8 1495 aaKnown RBP28.96■■■□□ 2.23
COPS7B-224ENST00000620578 ABCC9O60706 1549 aa28.93■■■□□ 2.22
COPS7B-224ENST00000620578 SHROOM4Q9ULL8 1493 aa28.59■■■□□ 2.17
COPS7B-224ENST00000620578 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
COPS7B-224ENST00000620578 NACADO15069 1562 aa27.99■■■□□ 2.07
COPS7B-224ENST00000620578 MYO15BQ96JP2 1530 aa27.97■■■□□ 2.07
COPS7B-224ENST00000620578 SCRIBQ14160 1630 aa27.89■■■□□ 2.06
COPS7B-224ENST00000620578 RB1CC1Q8TDY2 1594 aa27.83■■■□□ 2.05
COPS7B-224ENST00000620578 PABPN1Q86U42 306 aaKnown RBP eCLIP27.44■■□□□ 1.98
COPS7B-224ENST00000620578 SUPT5HO00267 1087 aaKnown RBP27.43■■□□□ 1.98
COPS7B-224ENST00000620578 UNC13AQ9UPW8 1703 aa27.39■■□□□ 1.97
COPS7B-224ENST00000620578 BICRAQ9NZM4 1560 aa27.15■■□□□ 1.94
COPS7B-224ENST00000620578 CECR2Q9BXF3 1484 aa27.1■■□□□ 1.93
COPS7B-224ENST00000620578 RSF1Q96T23 1441 aaPredicted RBP26.87■■□□□ 1.89
COPS7B-224ENST00000620578 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
COPS7B-224ENST00000620578 BAZ1AQ9NRL2 1556 aaPredicted RBP26.61■■□□□ 1.85
COPS7B-224ENST00000620578 WIZO95785 1651 aa26.61■■□□□ 1.85
COPS7B-224ENST00000620578 SMARCA4P51532 1647 aa26.57■■□□□ 1.84
COPS7B-224ENST00000620578 EIF4G1Q04637 1599 aaKnown RBP26.32■■□□□ 1.8
COPS7B-224ENST00000620578 ATAD2BQ9ULI0 1458 aa26.23■■□□□ 1.79
COPS7B-224ENST00000620578 TOP2AP11388 1531 aaKnown RBP26.13■■□□□ 1.77
COPS7B-224ENST00000620578 PEG3Q9GZU2 1588 aa26.1■■□□□ 1.77
COPS7B-224ENST00000620578 BAZ1BQ9UIG0 1483 aaKnown RBP26.06■■□□□ 1.76
COPS7B-224ENST00000620578 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
COPS7B-224ENST00000620578 CCDC88BA6NC98 1476 aa26.04■■□□□ 1.76
COPS7B-224ENST00000620578 CHIC1Q5VXU3 224 aa26.02■■□□□ 1.76
COPS7B-224ENST00000620578 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
COPS7B-224ENST00000620578 NCAPD3P42695 1498 aa25.94■■□□□ 1.74
COPS7B-224ENST00000620578 DNAJC5BQ9UF47 199 aa25.89■■□□□ 1.74
COPS7B-224ENST00000620578 HMGXB3Q12766 1538 aa25.79■■□□□ 1.72
COPS7B-224ENST00000620578 TRIM41Q8WV44 630 aa25.61■■□□□ 1.69
COPS7B-224ENST00000620578 ABCC8Q09428 1581 aa25.56■■□□□ 1.68
COPS7B-224ENST00000620578 FAM9AQ8IZU1 332 aaPredicted RBP25.41■■□□□ 1.66
COPS7B-224ENST00000620578 NESP48681 1621 aa25.39■■□□□ 1.66
COPS7B-224ENST00000620578 CFTRP13569 1480 aa25.37■■□□□ 1.65
COPS7B-224ENST00000620578 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
COPS7B-224ENST00000620578 EHMT2Q96KQ7 1210 aa25.27■■□□□ 1.64
COPS7B-224ENST00000620578 WRNQ14191 1432 aaPredicted RBP eCLIP25.26■■□□□ 1.63
COPS7B-224ENST00000620578 LOC105371045A0A1W2PR82 267 aa25.25■■□□□ 1.63
COPS7B-224ENST00000620578 SYNJ1O43426 1573 aa25.19■■□□□ 1.62
COPS7B-224ENST00000620578 FANCD2Q9BXW9 1451 aa25.1■■□□□ 1.61
COPS7B-224ENST00000620578 SOGA1O94964 1423 aa25.08■■□□□ 1.61
COPS7B-224ENST00000620578 CUX1P39880 1505 aa25.05■■□□□ 1.6
COPS7B-224ENST00000620578 RUSC2Q8N2Y8 1516 aa25.05■■□□□ 1.6
COPS7B-224ENST00000620578 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
COPS7B-224ENST00000620578 LAMC3Q9Y6N6 1575 aa25■■□□□ 1.59
COPS7B-224ENST00000620578 TOP2BQ02880 1626 aa24.96■■□□□ 1.59
COPS7B-224ENST00000620578 PDS5BQ9NTI5 1447 aa24.91■■□□□ 1.58
COPS7B-224ENST00000620578 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
COPS7B-224ENST00000620578 KIF21AQ7Z4S6 1674 aa24.89■■□□□ 1.57
COPS7B-224ENST00000620578 BIVM-ERCC5R4GMW8 1640 aa24.87■■□□□ 1.57
COPS7B-224ENST00000620578 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.57
COPS7B-224ENST00000620578 FGD5Q6ZNL6 1462 aa24.8■■□□□ 1.56
COPS7B-224ENST00000620578 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
COPS7B-224ENST00000620578 TOPBP1Q92547 1522 aa24.79■■□□□ 1.56
COPS7B-224ENST00000620578 RAD54L2Q9Y4B4 1467 aa24.76■■□□□ 1.55
COPS7B-224ENST00000620578 DNMBPQ6XZF7 1577 aa24.72■■□□□ 1.55
COPS7B-224ENST00000620578 ERCC6Q03468 1493 aa24.7■■□□□ 1.55
COPS7B-224ENST00000620578 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.54
COPS7B-224ENST00000620578 CUX2O14529 1486 aa24.65■■□□□ 1.54
COPS7B-224ENST00000620578 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
COPS7B-224ENST00000620578 EEA1Q15075 1411 aa24.59■■□□□ 1.53
COPS7B-224ENST00000620578 UBTFP17480 764 aaKnown RBP24.59■■□□□ 1.53
COPS7B-224ENST00000620578 KIF27Q86VH2 1401 aa24.57■■□□□ 1.52
COPS7B-224ENST00000620578 TDRD9Q8NDG6 1382 aaKnown RBP24.57■■□□□ 1.52
COPS7B-224ENST00000620578 RANGAP1P46060 587 aaPredicted RBP24.53■■□□□ 1.52
COPS7B-224ENST00000620578 RAPGEF2Q9Y4G8 1499 aa24.51■■□□□ 1.51
COPS7B-224ENST00000620578 IGF1RP08069 1367 aa24.5■■□□□ 1.51
COPS7B-224ENST00000620578 ABCA10Q8WWZ4 1543 aa24.46■■□□□ 1.51
COPS7B-224ENST00000620578 WDR62O43379 1518 aa24.43■■□□□ 1.5
COPS7B-224ENST00000620578 THOC2Q8NI27 1593 aaKnown RBP24.42■■□□□ 1.5
COPS7B-224ENST00000620578 AQRO60306 1485 aaKnown RBP eCLIP24.41■■□□□ 1.52e-6■■■■■ 29.8
COPS7B-224ENST00000620578 GOLGA3Q08378 1498 aa24.4■■□□□ 1.5
COPS7B-224ENST00000620578 PRXQ9BXM0 1461 aa24.39■■□□□ 1.49
COPS7B-224ENST00000620578 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
COPS7B-224ENST00000620578 TARBP1Q13395 1621 aaKnown RBP24.38■■□□□ 1.49
COPS7B-224ENST00000620578 CARMIL1Q5VZK9 1371 aa24.34■■□□□ 1.49
COPS7B-224ENST00000620578 KIF21BO75037 1637 aa24.34■■□□□ 1.49
COPS7B-224ENST00000620578 TNIKQ9UKE5 1360 aa24.33■■□□□ 1.49
COPS7B-224ENST00000620578 WDR97A6NE52 1622 aa24.32■■□□□ 1.48
COPS7B-224ENST00000620578 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
COPS7B-224ENST00000620578 CEP162Q5TB80 1403 aa24.29■■□□□ 1.48
COPS7B-224ENST00000620578 ABCA5Q8WWZ7 1642 aa24.25■■□□□ 1.47
COPS7B-224ENST00000620578 IFT140Q96RY7 1462 aa24.25■■□□□ 1.47
COPS7B-224ENST00000620578 PPARGC1BQ86YN6 1023 aaKnown RBP24.23■■□□□ 1.47
COPS7B-224ENST00000620578 ERICH3Q5RHP9 1530 aa24.18■■□□□ 1.46
COPS7B-224ENST00000620578 CLIP1P30622 1438 aa24.12■■□□□ 1.45
COPS7B-224ENST00000620578 EIF4G3O43432 1585 aaKnown RBP24.11■■□□□ 1.45
COPS7B-224ENST00000620578 FBLN2P98095 1184 aa24.09■■□□□ 1.45
COPS7B-224ENST00000620578 GRIN2BQ13224 1484 aa24.09■■□□□ 1.45
COPS7B-224ENST00000620578 PBRM1Q86U86 1689 aa24.08■■□□□ 1.45
COPS7B-224ENST00000620578 TTBK1Q5TCY1 1321 aaPredicted RBP24.07■■□□□ 1.44
COPS7B-224ENST00000620578 P3H3Q8IVL6 736 aa24.07■■□□□ 1.44
COPS7B-224ENST00000620578 SNAPC4Q5SXM2 1469 aa24.05■■□□□ 1.44
COPS7B-224ENST00000620578 CUL7Q14999 1698 aa24.03■■□□□ 1.44
COPS7B-224ENST00000620578 FHAD1B1AJZ9 1412 aa23.99■■□□□ 1.43
COPS7B-224ENST00000620578 CHMP7Q8WUX9 453 aaPredicted RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms