RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 APLP2Q06481 763 aa23.36■■□□□ 1.33
LDLRAD4-205ENST00000585931 HRCP23327 699 aa23.35■■□□□ 1.33
LDLRAD4-205ENST00000585931 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
LDLRAD4-205ENST00000585931 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
LDLRAD4-205ENST00000585931 FHAD1B1AJZ9 1412 aa23.32■■□□□ 1.32
LDLRAD4-205ENST00000585931 P3H3Q8IVL6 736 aa23.29■■□□□ 1.32
LDLRAD4-205ENST00000585931 ADAMTS12P58397 1594 aa23.29■■□□□ 1.32
LDLRAD4-205ENST00000585931 EIF4G3O43432 1585 aaKnown RBP23.27■■□□□ 1.32
LDLRAD4-205ENST00000585931 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
LDLRAD4-205ENST00000585931 KANK4Q5T7N3 995 aaPredicted RBP23.21■■□□□ 1.31
LDLRAD4-205ENST00000585931 FHOD3Q2V2M9 1422 aa23.21■■□□□ 1.31
LDLRAD4-205ENST00000585931 SNAPC4Q5SXM2 1469 aa23.2■■□□□ 1.31
LDLRAD4-205ENST00000585931 SAMD9Q5K651 1589 aa23.13■■□□□ 1.29
LDLRAD4-205ENST00000585931 MAGI1Q96QZ7 1491 aaPredicted RBP23.11■■□□□ 1.29
LDLRAD4-205ENST00000585931 PCF11O94913 1555 aaKnown RBP23.09■■□□□ 1.29
LDLRAD4-205ENST00000585931 IQGAP2Q13576 1575 aa23.09■■□□□ 1.29
LDLRAD4-205ENST00000585931 GRIN2AQ12879 1464 aa23.08■■□□□ 1.29
LDLRAD4-205ENST00000585931 TIAM1Q13009 1591 aa23.06■■□□□ 1.28
LDLRAD4-205ENST00000585931 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
LDLRAD4-205ENST00000585931 FMN1Q68DA7 1419 aa23.05■■□□□ 1.28
LDLRAD4-205ENST00000585931 CHMP7Q8WUX9 453 aaPredicted RBP23.05■■□□□ 1.28
LDLRAD4-205ENST00000585931 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
LDLRAD4-205ENST00000585931 SYNJ2O15056 1496 aa23.04■■□□□ 1.28
LDLRAD4-205ENST00000585931 CASKIN1Q8WXD9 1431 aa23.04■■□□□ 1.28
LDLRAD4-205ENST00000585931 FYCO1Q9BQS8 1478 aa23.02■■□□□ 1.28
LDLRAD4-205ENST00000585931 FBLN2P98095 1184 aa23.02■■□□□ 1.28
LDLRAD4-205ENST00000585931 KIAA0586Q9BVV6 1533 aa23.02■■□□□ 1.27
LDLRAD4-205ENST00000585931 LRRC9Q6ZRR7 1453 aa22.98■■□□□ 1.27
LDLRAD4-205ENST00000585931 UGGT2Q9NYU1 1516 aa22.97■■□□□ 1.27
LDLRAD4-205ENST00000585931 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.96■■□□□ 1.27
LDLRAD4-205ENST00000585931 HNRNPUL2Q1KMD3 747 aaKnown RBP22.96■■□□□ 1.27
LDLRAD4-205ENST00000585931 CFAP43Q8NDM7 1665 aa22.95■■□□□ 1.27
LDLRAD4-205ENST00000585931 CEP170Q5SW79 1584 aa22.95■■□□□ 1.26
LDLRAD4-205ENST00000585931 RRBP1Q9P2E9 1410 aaKnown RBP22.91■■□□□ 1.26
LDLRAD4-205ENST00000585931 NUP160Q12769 1436 aa22.9■■□□□ 1.26
LDLRAD4-205ENST00000585931 DISP1Q96F81 1524 aa22.89■■□□□ 1.26
LDLRAD4-205ENST00000585931 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
LDLRAD4-205ENST00000585931 LRRIQ1Q96JM4 1722 aa22.87■■□□□ 1.25
LDLRAD4-205ENST00000585931 KIAA0556O60303 1618 aa22.86■■□□□ 1.25
LDLRAD4-205ENST00000585931 CCER1Q8TC90 406 aaPredicted RBP22.85■■□□□ 1.25
LDLRAD4-205ENST00000585931 PHLDB1Q86UU1 1377 aa22.83■■□□□ 1.25
LDLRAD4-205ENST00000585931 CCNB3Q8WWL7 1395 aa22.83■■□□□ 1.25
LDLRAD4-205ENST00000585931 JPH4Q96JJ6 628 aa22.82■■□□□ 1.24
LDLRAD4-205ENST00000585931 MTUS2Q5JR59 1369 aa22.77■■□□□ 1.24
LDLRAD4-205ENST00000585931 HECW1Q76N89 1606 aa22.76■■□□□ 1.23
LDLRAD4-205ENST00000585931 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
LDLRAD4-205ENST00000585931 CHD1O14646 1710 aa22.73■■□□□ 1.23
LDLRAD4-205ENST00000585931 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
LDLRAD4-205ENST00000585931 CARMIL2Q6F5E8 1435 aa22.7■■□□□ 1.22
LDLRAD4-205ENST00000585931 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
LDLRAD4-205ENST00000585931 ARID3CA6NKF2 412 aa22.7■■□□□ 1.22
LDLRAD4-205ENST00000585931 ITGAEP38570 1179 aa22.69■■□□□ 1.22
LDLRAD4-205ENST00000585931 CDK13Q14004 1512 aaKnown RBP22.68■■□□□ 1.22
LDLRAD4-205ENST00000585931 EHBP1L1Q8N3D4 1523 aa22.66■■□□□ 1.22
LDLRAD4-205ENST00000585931 FAM50AQ14320 339 aaKnown RBP22.66■■□□□ 1.22
LDLRAD4-205ENST00000585931 NUP153P49790 1475 aaKnown RBP22.65■■□□□ 1.22
LDLRAD4-205ENST00000585931 RAPGEF6Q8TEU7 1601 aa22.65■■□□□ 1.22
LDLRAD4-205ENST00000585931 NCOA2Q15596 1464 aa22.65■■□□□ 1.22
LDLRAD4-205ENST00000585931 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
LDLRAD4-205ENST00000585931 SUPT6HQ7KZ85 1726 aaKnown RBP22.63■■□□□ 1.21
LDLRAD4-205ENST00000585931 PRG4Q92954 1404 aaPredicted RBP22.61■■□□□ 1.21
LDLRAD4-205ENST00000585931 FGD6Q6ZV73 1430 aa22.6■■□□□ 1.21
LDLRAD4-205ENST00000585931 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
LDLRAD4-205ENST00000585931 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.57■■□□□ 1.2
LDLRAD4-205ENST00000585931 MYOM3Q5VTT5 1437 aa22.57■■□□□ 1.2
LDLRAD4-205ENST00000585931 SHROOM2Q13796 1616 aa22.53■■□□□ 1.2
LDLRAD4-205ENST00000585931 ABCA8O94911 1581 aa22.5■■□□□ 1.19
LDLRAD4-205ENST00000585931 CDK11AQ9UQ88 783 aaPredicted RBP22.5■■□□□ 1.19
LDLRAD4-205ENST00000585931 PTPRGP23470 1445 aa22.49■■□□□ 1.19
LDLRAD4-205ENST00000585931 DHX57Q6P158 1386 aaKnown RBP22.47■■□□□ 1.19
LDLRAD4-205ENST00000585931 RAB3GAP2Q9H2M9 1393 aa22.47■■□□□ 1.19
LDLRAD4-205ENST00000585931 CLASP1Q7Z460 1538 aa22.45■■□□□ 1.18
LDLRAD4-205ENST00000585931 PTPN23Q9H3S7 1636 aa22.45■■□□□ 1.18
LDLRAD4-205ENST00000585931 ERCC6L2Q5T890 1561 aa22.45■■□□□ 1.18
LDLRAD4-205ENST00000585931 SETD5Q9C0A6 1442 aa22.45■■□□□ 1.18
LDLRAD4-205ENST00000585931 PTPRKQ15262 1439 aa22.43■■□□□ 1.18
LDLRAD4-205ENST00000585931 TROQ12816 1431 aaPredicted RBP22.42■■□□□ 1.18
LDLRAD4-205ENST00000585931 ATP10BO94823 1461 aa22.42■■□□□ 1.18
LDLRAD4-205ENST00000585931 TCOF1Q13428 1488 aaKnown RBP22.4■■□□□ 1.18
LDLRAD4-205ENST00000585931 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
LDLRAD4-205ENST00000585931 UACAQ9BZF9 1416 aa22.36■■□□□ 1.17
LDLRAD4-205ENST00000585931 PLEKHD1A6NEE1 506 aa22.36■■□□□ 1.17
LDLRAD4-205ENST00000585931 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
LDLRAD4-205ENST00000585931 KIF14Q15058 1648 aa22.34■■□□□ 1.17
LDLRAD4-205ENST00000585931 ADCY10Q96PN6 1610 aa22.32■■□□□ 1.16
LDLRAD4-205ENST00000585931 ZNF644Q9H582 1327 aaPredicted RBP22.3■■□□□ 1.16
LDLRAD4-205ENST00000585931 HFM1A2PYH4 1435 aa22.29■■□□□ 1.16
LDLRAD4-205ENST00000585931 GPATCH8Q9UKJ3 1502 aaKnown RBP22.28■■□□□ 1.16
LDLRAD4-205ENST00000585931 CHIC2Q9UKJ5 165 aa22.27■■□□□ 1.16
LDLRAD4-205ENST00000585931 NAIPQ13075 1403 aa22.26■■□□□ 1.15
LDLRAD4-205ENST00000585931 CFDP1Q9UEE9 299 aaPredicted RBP22.25■■□□□ 1.15
LDLRAD4-205ENST00000585931 ABCC2Q92887 1545 aa22.25■■□□□ 1.15
LDLRAD4-205ENST00000585931 ABCC10Q5T3U5 1492 aa22.23■■□□□ 1.15
LDLRAD4-205ENST00000585931 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
LDLRAD4-205ENST00000585931 MAPKBP1O60336 1514 aa22.22■■□□□ 1.15
LDLRAD4-205ENST00000585931 ITSN2Q9NZM3 1697 aa22.22■■□□□ 1.15
LDLRAD4-205ENST00000585931 OSCARQ8IYS5 282 aa22.2■■□□□ 1.14
LDLRAD4-205ENST00000585931 DAPK1P53355 1430 aa22.2■■□□□ 1.14
LDLRAD4-205ENST00000585931 ABCC5O15440 1437 aa22.19■■□□□ 1.14
LDLRAD4-205ENST00000585931 ZNF777Q9ULD5 760 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms