RNA–Protein interactions for RNA: ENST00000585931.5

LDLRAD4-205, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD4, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-205ENST00000585931 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
LDLRAD4-205ENST00000585931 CCDC180Q9P1Z9 1646 aa29.2■■■□□ 2.26
LDLRAD4-205ENST00000585931 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
LDLRAD4-205ENST00000585931 DCAF8L2P0C7V8 631 aa27.97■■■□□ 2.07
LDLRAD4-205ENST00000585931 SHROOM4Q9ULL8 1493 aa27.81■■■□□ 2.04
LDLRAD4-205ENST00000585931 DCAF1Q9Y4B6 1507 aa27.8■■■□□ 2.04
LDLRAD4-205ENST00000585931 ABCC9O60706 1549 aa27.61■■■□□ 2.01
LDLRAD4-205ENST00000585931 MYO15BQ96JP2 1530 aa27.38■■□□□ 1.97
LDLRAD4-205ENST00000585931 NACADO15069 1562 aa27.19■■□□□ 1.94
LDLRAD4-205ENST00000585931 SCRIBQ14160 1630 aa27.02■■□□□ 1.92
LDLRAD4-205ENST00000585931 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
LDLRAD4-205ENST00000585931 SUPT5HO00267 1087 aaKnown RBP26.87■■□□□ 1.89
LDLRAD4-205ENST00000585931 UNC13AQ9UPW8 1703 aa26.44■■□□□ 1.82
LDLRAD4-205ENST00000585931 RSF1Q96T23 1441 aaPredicted RBP26.29■■□□□ 1.8
LDLRAD4-205ENST00000585931 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
LDLRAD4-205ENST00000585931 BICRAQ9NZM4 1560 aa26.17■■□□□ 1.78
LDLRAD4-205ENST00000585931 PABPN1Q86U42 306 aaKnown RBP eCLIP26.15■■□□□ 1.78
LDLRAD4-205ENST00000585931 MROH2BQ7Z745 1585 aa26.11■■□□□ 1.77
LDLRAD4-205ENST00000585931 BAZ1AQ9NRL2 1556 aaPredicted RBP25.99■■□□□ 1.75
LDLRAD4-205ENST00000585931 WIZO95785 1651 aa25.91■■□□□ 1.74
LDLRAD4-205ENST00000585931 SMARCA4P51532 1647 aa25.86■■□□□ 1.73
LDLRAD4-205ENST00000585931 CHIC1Q5VXU3 224 aa25.79■■□□□ 1.72
LDLRAD4-205ENST00000585931 TOP2AP11388 1531 aaKnown RBP25.56■■□□□ 1.68
LDLRAD4-205ENST00000585931 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
LDLRAD4-205ENST00000585931 ATAD2BQ9ULI0 1458 aa25.42■■□□□ 1.66
LDLRAD4-205ENST00000585931 CCDC88BA6NC98 1476 aa25.39■■□□□ 1.65
LDLRAD4-205ENST00000585931 SMARCA2P51531 1590 aa25.37■■□□□ 1.65
LDLRAD4-205ENST00000585931 EIF4G1Q04637 1599 aaKnown RBP25.35■■□□□ 1.65
LDLRAD4-205ENST00000585931 BAZ1BQ9UIG0 1483 aaKnown RBP25.27■■□□□ 1.64
LDLRAD4-205ENST00000585931 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
LDLRAD4-205ENST00000585931 NCAPD3P42695 1498 aa25.14■■□□□ 1.62
LDLRAD4-205ENST00000585931 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
LDLRAD4-205ENST00000585931 ABCC8Q09428 1581 aa24.95■■□□□ 1.58
LDLRAD4-205ENST00000585931 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
LDLRAD4-205ENST00000585931 LOC105371045A0A1W2PR82 267 aa24.89■■□□□ 1.58
LDLRAD4-205ENST00000585931 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
LDLRAD4-205ENST00000585931 WRNQ14191 1432 aaPredicted RBP eCLIP24.71■■□□□ 1.55
LDLRAD4-205ENST00000585931 CFTRP13569 1480 aa24.66■■□□□ 1.54
LDLRAD4-205ENST00000585931 SYNJ1O43426 1573 aa24.61■■□□□ 1.53
LDLRAD4-205ENST00000585931 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
LDLRAD4-205ENST00000585931 SOGA1O94964 1423 aa24.54■■□□□ 1.52
LDLRAD4-205ENST00000585931 EHMT2Q96KQ7 1210 aa24.52■■□□□ 1.52
LDLRAD4-205ENST00000585931 RUSC2Q8N2Y8 1516 aa24.46■■□□□ 1.51
LDLRAD4-205ENST00000585931 TOP2BQ02880 1626 aa24.45■■□□□ 1.5
LDLRAD4-205ENST00000585931 DNAJC5BQ9UF47 199 aa24.45■■□□□ 1.5
LDLRAD4-205ENST00000585931 PRDM2Q13029 1718 aa24.45■■□□□ 1.5
LDLRAD4-205ENST00000585931 BIVM-ERCC5R4GMW8 1640 aa24.4■■□□□ 1.5
LDLRAD4-205ENST00000585931 EEA1Q15075 1411 aa24.38■■□□□ 1.49
LDLRAD4-205ENST00000585931 CUX1P39880 1505 aa24.38■■□□□ 1.49
LDLRAD4-205ENST00000585931 CSRNP3Q8WYN3 585 aa24.36■■□□□ 1.49
LDLRAD4-205ENST00000585931 NESP48681 1621 aa24.32■■□□□ 1.48
LDLRAD4-205ENST00000585931 FANCD2Q9BXW9 1451 aa24.27■■□□□ 1.48
LDLRAD4-205ENST00000585931 LAMC3Q9Y6N6 1575 aa24.21■■□□□ 1.47
LDLRAD4-205ENST00000585931 GOLGA3Q08378 1498 aa24.11■■□□□ 1.45
LDLRAD4-205ENST00000585931 TNIKQ9UKE5 1360 aa24.1■■□□□ 1.45
LDLRAD4-205ENST00000585931 UBTFP17480 764 aaKnown RBP24.1■■□□□ 1.45
LDLRAD4-205ENST00000585931 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
LDLRAD4-205ENST00000585931 FGD5Q6ZNL6 1462 aa24.08■■□□□ 1.44
LDLRAD4-205ENST00000585931 KIF21BO75037 1637 aa24.08■■□□□ 1.44
LDLRAD4-205ENST00000585931 PDS5BQ9NTI5 1447 aa24.06■■□□□ 1.44
LDLRAD4-205ENST00000585931 KIF27Q86VH2 1401 aa24.05■■□□□ 1.44
LDLRAD4-205ENST00000585931 DNMBPQ6XZF7 1577 aa24.04■■□□□ 1.44
LDLRAD4-205ENST00000585931 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
LDLRAD4-205ENST00000585931 RAPGEF2Q9Y4G8 1499 aa24.01■■□□□ 1.43
LDLRAD4-205ENST00000585931 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
LDLRAD4-205ENST00000585931 CUX2O14529 1486 aa23.97■■□□□ 1.43
LDLRAD4-205ENST00000585931 URB2Q14146 1524 aaKnown RBP23.97■■□□□ 1.43
LDLRAD4-205ENST00000585931 KIF21AQ7Z4S6 1674 aa23.96■■□□□ 1.43
LDLRAD4-205ENST00000585931 PRXQ9BXM0 1461 aa23.96■■□□□ 1.43
LDLRAD4-205ENST00000585931 PELP1Q8IZL8 1130 aaKnown RBP23.95■■□□□ 1.42
LDLRAD4-205ENST00000585931 POLA1P09884 1462 aaPredicted RBP23.94■■□□□ 1.42
LDLRAD4-205ENST00000585931 PCGF6Q9BYE7 350 aa23.94■■□□□ 1.42
LDLRAD4-205ENST00000585931 RAD54L2Q9Y4B4 1467 aa23.91■■□□□ 1.42
LDLRAD4-205ENST00000585931 IGF1RP08069 1367 aa23.88■■□□□ 1.41
LDLRAD4-205ENST00000585931 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
LDLRAD4-205ENST00000585931 ABCA10Q8WWZ4 1543 aa23.84■■□□□ 1.41
LDLRAD4-205ENST00000585931 TRIM26Q12899 539 aaPredicted RBP23.81■■□□□ 1.4
LDLRAD4-205ENST00000585931 CLIP1P30622 1438 aa23.77■■□□□ 1.4
LDLRAD4-205ENST00000585931 CARMIL1Q5VZK9 1371 aa23.75■■□□□ 1.39
LDLRAD4-205ENST00000585931 PPARGC1BQ86YN6 1023 aaKnown RBP23.74■■□□□ 1.39
LDLRAD4-205ENST00000585931 RANGAP1P46060 587 aaPredicted RBP23.73■■□□□ 1.39
LDLRAD4-205ENST00000585931 MRC2Q9UBG0 1479 aa23.72■■□□□ 1.39
LDLRAD4-205ENST00000585931 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
LDLRAD4-205ENST00000585931 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
LDLRAD4-205ENST00000585931 TARBP1Q13395 1621 aaKnown RBP23.64■■□□□ 1.37
LDLRAD4-205ENST00000585931 ABCA5Q8WWZ7 1642 aa23.61■■□□□ 1.37
LDLRAD4-205ENST00000585931 ERCC6Q03468 1493 aa23.6■■□□□ 1.37
LDLRAD4-205ENST00000585931 GAPVD1Q14C86 1478 aa23.59■■□□□ 1.37
LDLRAD4-205ENST00000585931 WDR62O43379 1518 aa23.58■■□□□ 1.37
LDLRAD4-205ENST00000585931 MYT1Q01538 1121 aa23.57■■□□□ 1.36
LDLRAD4-205ENST00000585931 VPS8Q8N3P4 1428 aa23.57■■□□□ 1.36
LDLRAD4-205ENST00000585931 CUL7Q14999 1698 aa23.55■■□□□ 1.36
LDLRAD4-205ENST00000585931 ARAP1Q96P48 1450 aa23.52■■□□□ 1.35
LDLRAD4-205ENST00000585931 TTBK1Q5TCY1 1321 aaPredicted RBP23.49■■□□□ 1.35
LDLRAD4-205ENST00000585931 AQRO60306 1485 aaKnown RBP eCLIP23.48■■□□□ 1.35
LDLRAD4-205ENST00000585931 ARHGAP35Q9NRY4 1499 aa23.48■■□□□ 1.35
LDLRAD4-205ENST00000585931 THOC2Q8NI27 1593 aaKnown RBP23.47■■□□□ 1.35
LDLRAD4-205ENST00000585931 IFT140Q96RY7 1462 aa23.46■■□□□ 1.35
LDLRAD4-205ENST00000585931 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
LDLRAD4-205ENST00000585931 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms