RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 GRIN2BQ13224 1484 aa34.75■■■■□ 3.15
HOMER3-204ENST00000539827 FHAD1B1AJZ9 1412 aa34.7■■■■□ 3.15
HOMER3-204ENST00000539827 ADAMTS12P58397 1594 aa34.67■■■■□ 3.14
HOMER3-204ENST00000539827 EIF4G3O43432 1585 aaKnown RBP34.65■■■■□ 3.14
HOMER3-204ENST00000539827 HRCP23327 699 aa34.63■■■■□ 3.14
HOMER3-204ENST00000539827 P3H3Q8IVL6 736 aa34.63■■■■□ 3.14
HOMER3-204ENST00000539827 SNAPC4Q5SXM2 1469 aa34.55■■■■□ 3.12
HOMER3-204ENST00000539827 EFCAB5A4FU69 1503 aa34.54■■■■□ 3.12
HOMER3-204ENST00000539827 FHOD3Q2V2M9 1422 aa34.52■■■■□ 3.12
HOMER3-204ENST00000539827 KANK4Q5T7N3 995 aaPredicted RBP34.45■■■■□ 3.11
HOMER3-204ENST00000539827 SAMD9Q5K651 1589 aa34.4■■■■□ 3.1
HOMER3-204ENST00000539827 MAGI1Q96QZ7 1491 aaPredicted RBP34.39■■■■□ 3.1
HOMER3-204ENST00000539827 PCF11O94913 1555 aaKnown RBP34.37■■■■□ 3.09
HOMER3-204ENST00000539827 IQGAP2Q13576 1575 aa34.36■■■■□ 3.09
HOMER3-204ENST00000539827 GRIN2AQ12879 1464 aa34.35■■■■□ 3.09
HOMER3-204ENST00000539827 ATP1B4Q9UN42 357 aaPredicted RBP34.32■■■■□ 3.08
HOMER3-204ENST00000539827 TIAM1Q13009 1591 aa34.3■■■■□ 3.08
HOMER3-204ENST00000539827 CHMP7Q8WUX9 453 aaPredicted RBP34.29■■■■□ 3.08
HOMER3-204ENST00000539827 SYNJ2O15056 1496 aa34.29■■■■□ 3.08
HOMER3-204ENST00000539827 FMN1Q68DA7 1419 aa34.27■■■■□ 3.08
HOMER3-204ENST00000539827 MAP3K1Q13233 1512 aa34.27■■■■□ 3.08
HOMER3-204ENST00000539827 CASKIN1Q8WXD9 1431 aa34.26■■■■□ 3.07
HOMER3-204ENST00000539827 FBLN2P98095 1184 aa34.25■■■■□ 3.07
HOMER3-204ENST00000539827 FYCO1Q9BQS8 1478 aa34.24■■■■□ 3.07
HOMER3-204ENST00000539827 KIAA0586Q9BVV6 1533 aa34.22■■■■□ 3.07
HOMER3-204ENST00000539827 CFAP43Q8NDM7 1665 aa34.18■■■■□ 3.06
HOMER3-204ENST00000539827 UGGT2Q9NYU1 1516 aa34.17■■■■□ 3.06
HOMER3-204ENST00000539827 CEP170Q5SW79 1584 aa34.15■■■■□ 3.06
HOMER3-204ENST00000539827 LRRC9Q6ZRR7 1453 aa34.15■■■■□ 3.06
HOMER3-204ENST00000539827 HNRNPUL2Q1KMD3 747 aaKnown RBP34.12■■■■□ 3.05
HOMER3-204ENST00000539827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.07■■■■□ 3.05
HOMER3-204ENST00000539827 NUP160Q12769 1436 aa34.05■■■■□ 3.04
HOMER3-204ENST00000539827 DISP1Q96F81 1524 aa34.03■■■■□ 3.04
HOMER3-204ENST00000539827 KIAA0556O60303 1618 aa34.01■■■■□ 3.04
HOMER3-204ENST00000539827 LRRIQ1Q96JM4 1722 aa34.01■■■■□ 3.04
HOMER3-204ENST00000539827 RRBP1Q9P2E9 1410 aaKnown RBP34.01■■■■□ 3.03
HOMER3-204ENST00000539827 ZEB1P37275 1124 aaPredicted RBP33.98■■■■□ 3.03
HOMER3-204ENST00000539827 CCER1Q8TC90 406 aaPredicted RBP33.94■■■■□ 3.02
HOMER3-204ENST00000539827 CCNB3Q8WWL7 1395 aa33.92■■■■□ 3.02
HOMER3-204ENST00000539827 PHLDB1Q86UU1 1377 aa33.91■■■■□ 3.02
HOMER3-204ENST00000539827 JPH4Q96JJ6 628 aa33.91■■■■□ 3.02
HOMER3-204ENST00000539827 HECW1Q76N89 1606 aa33.89■■■■□ 3.02
HOMER3-204ENST00000539827 CHD1O14646 1710 aa33.88■■■■□ 3.01
HOMER3-204ENST00000539827 MTUS2Q5JR59 1369 aa33.86■■■■□ 3.01
HOMER3-204ENST00000539827 CCDC18Q5T9S5 1454 aa33.83■■■■□ 3.01
HOMER3-204ENST00000539827 CARMIL2Q6F5E8 1435 aa33.8■■■■□ 3
HOMER3-204ENST00000539827 EPRSP07814 1512 aaKnown RBP33.79■■■■□ 3
HOMER3-204ENST00000539827 ARID3CA6NKF2 412 aa33.78■■■■□ 3
HOMER3-204ENST00000539827 CDK13Q14004 1512 aaKnown RBP33.76■■■□□ 2.99
HOMER3-204ENST00000539827 ITGAEP38570 1179 aa33.74■■■□□ 2.99
HOMER3-204ENST00000539827 MAGI3Q5TCQ9 1506 aa33.74■■■□□ 2.99
HOMER3-204ENST00000539827 EHBP1L1Q8N3D4 1523 aa33.73■■■□□ 2.99
HOMER3-204ENST00000539827 RAPGEF6Q8TEU7 1601 aa33.73■■■□□ 2.99
HOMER3-204ENST00000539827 FAM50AQ14320 339 aaKnown RBP33.7■■■□□ 2.99
HOMER3-204ENST00000539827 NCOA2Q15596 1464 aa33.68■■■□□ 2.98
HOMER3-204ENST00000539827 SUPT6HQ7KZ85 1726 aaKnown RBP33.67■■■□□ 2.98
HOMER3-204ENST00000539827 NUP153P49790 1475 aaKnown RBP33.67■■■□□ 2.98
HOMER3-204ENST00000539827 PRG4Q92954 1404 aaPredicted RBP33.65■■■□□ 2.98
HOMER3-204ENST00000539827 PLB1Q6P1J6 1458 aa33.64■■■□□ 2.98
HOMER3-204ENST00000539827 FGD6Q6ZV73 1430 aa33.59■■■□□ 2.97
HOMER3-204ENST00000539827 ARHGEF11O15085 1522 aa33.56■■■□□ 2.96
HOMER3-204ENST00000539827 MYOM3Q5VTT5 1437 aa33.55■■■□□ 2.96
HOMER3-204ENST00000539827 SHROOM2Q13796 1616 aa33.52■■■□□ 2.96
HOMER3-204ENST00000539827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.51■■■□□ 2.96
HOMER3-204ENST00000539827 ABCA8O94911 1581 aa33.49■■■□□ 2.95
HOMER3-204ENST00000539827 PTPRGP23470 1445 aa33.47■■■□□ 2.95
HOMER3-204ENST00000539827 CDK11AQ9UQ88 783 aaPredicted RBP33.45■■■□□ 2.95
HOMER3-204ENST00000539827 CLASP1Q7Z460 1538 aa33.43■■■□□ 2.94
HOMER3-204ENST00000539827 ERCC6L2Q5T890 1561 aa33.4■■■□□ 2.94
HOMER3-204ENST00000539827 PTPN23Q9H3S7 1636 aa33.4■■■□□ 2.94
HOMER3-204ENST00000539827 DHX57Q6P158 1386 aaKnown RBP33.37■■■□□ 2.93
HOMER3-204ENST00000539827 RAB3GAP2Q9H2M9 1393 aa33.36■■■□□ 2.93
HOMER3-204ENST00000539827 TROQ12816 1431 aaPredicted RBP33.36■■■□□ 2.93
HOMER3-204ENST00000539827 SETD5Q9C0A6 1442 aa33.36■■■□□ 2.93
HOMER3-204ENST00000539827 ATP10BO94823 1461 aa33.34■■■□□ 2.93
HOMER3-204ENST00000539827 TCOF1Q13428 1488 aaKnown RBP33.31■■■□□ 2.92
HOMER3-204ENST00000539827 PTPRKQ15262 1439 aa33.29■■■□□ 2.92
HOMER3-204ENST00000539827 MIA2Q96PC5 1412 aa33.28■■■□□ 2.92
HOMER3-204ENST00000539827 UACAQ9BZF9 1416 aa33.26■■■□□ 2.91
HOMER3-204ENST00000539827 PLEKHD1A6NEE1 506 aa33.25■■■□□ 2.91
HOMER3-204ENST00000539827 KIF14Q15058 1648 aa33.24■■■□□ 2.91
HOMER3-204ENST00000539827 ADCY10Q96PN6 1610 aa33.22■■■□□ 2.91
HOMER3-204ENST00000539827 CLSPNQ9HAW4 1339 aa33.16■■■□□ 2.9
HOMER3-204ENST00000539827 ABCC2Q92887 1545 aa33.12■■■□□ 2.89
HOMER3-204ENST00000539827 ZNF644Q9H582 1327 aaPredicted RBP33.12■■■□□ 2.89
HOMER3-204ENST00000539827 GPATCH8Q9UKJ3 1502 aaKnown RBP33.11■■■□□ 2.89
HOMER3-204ENST00000539827 CHIC2Q9UKJ5 165 aa33.1■■■□□ 2.89
HOMER3-204ENST00000539827 HFM1A2PYH4 1435 aa33.1■■■□□ 2.89
HOMER3-204ENST00000539827 ITSN2Q9NZM3 1697 aa33.1■■■□□ 2.89
HOMER3-204ENST00000539827 CFDP1Q9UEE9 299 aaPredicted RBP33.08■■■□□ 2.89
HOMER3-204ENST00000539827 ABCC10Q5T3U5 1492 aa33.06■■■□□ 2.88
HOMER3-204ENST00000539827 NAIPQ13075 1403 aa33.06■■■□□ 2.88
HOMER3-204ENST00000539827 RRP7BPQ9NSQ0 103 aa33.04■■■□□ 2.88
HOMER3-204ENST00000539827 OSCARQ8IYS5 282 aa33.02■■■□□ 2.88
HOMER3-204ENST00000539827 ZNF777Q9ULD5 760 aaPredicted RBP33.01■■■□□ 2.88
HOMER3-204ENST00000539827 DAPK1P53355 1430 aa33.01■■■□□ 2.88
HOMER3-204ENST00000539827 CAMSAP2Q08AD1 1489 aa33.01■■■□□ 2.87
HOMER3-204ENST00000539827 CDC42BPAQ5VT25 1732 aa33■■■□□ 2.87
HOMER3-204ENST00000539827 MAPKBP1O60336 1514 aa32.99■■■□□ 2.87
HOMER3-204ENST00000539827 DNMT1P26358 1616 aaKnown RBP32.99■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 1214.2 ms