RNA–Protein interactions for RNA: ENST00000524006.5

SPIDR-222, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-222ENST00000524006 WDR97A6NE52 1622 aa16.68■□□□□ 0.26
SPIDR-222ENST00000524006 CUL7Q14999 1698 aa16.68■□□□□ 0.26
SPIDR-222ENST00000524006 CLASP1Q7Z460 1538 aa16.63■□□□□ 0.25
SPIDR-222ENST00000524006 CTTNBP2Q8WZ74 1663 aa16.62■□□□□ 0.25
SPIDR-222ENST00000524006 VPS8Q8N3P4 1428 aa16.62■□□□□ 0.25
SPIDR-222ENST00000524006 CHMP7Q8WUX9 453 aaPredicted RBP16.62■□□□□ 0.25
SPIDR-222ENST00000524006 GRIN2BQ13224 1484 aa16.61■□□□□ 0.25
SPIDR-222ENST00000524006 MAGI1Q96QZ7 1491 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-222ENST00000524006 TRHP20396 242 aaPredicted RBP16.61■□□□□ 0.25
SPIDR-222ENST00000524006 APLP2Q06481 763 aa16.6■□□□□ 0.25
SPIDR-222ENST00000524006 PPARGC1BQ86YN6 1023 aaKnown RBP16.6■□□□□ 0.25
SPIDR-222ENST00000524006 ABCA10Q8WWZ4 1543 aa16.6■□□□□ 0.25
SPIDR-222ENST00000524006 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
SPIDR-222ENST00000524006 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
SPIDR-222ENST00000524006 PBRM1Q86U86 1689 aa16.54■□□□□ 0.24
SPIDR-222ENST00000524006 ZEB1P37275 1124 aaPredicted RBP16.54■□□□□ 0.24
SPIDR-222ENST00000524006 GAPVD1Q14C86 1478 aa16.54■□□□□ 0.24
SPIDR-222ENST00000524006 ABCA5Q8WWZ7 1642 aa16.53■□□□□ 0.24
SPIDR-222ENST00000524006 TTBK1Q5TCY1 1321 aaPredicted RBP16.52■□□□□ 0.24
SPIDR-222ENST00000524006 CARMIL1Q5VZK9 1371 aa16.51■□□□□ 0.23
SPIDR-222ENST00000524006 IGF1RP08069 1367 aa16.47■□□□□ 0.23
SPIDR-222ENST00000524006 EFCAB5A4FU69 1503 aa16.43■□□□□ 0.22
SPIDR-222ENST00000524006 ARHGAP35Q9NRY4 1499 aa16.41■□□□□ 0.22
SPIDR-222ENST00000524006 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
SPIDR-222ENST00000524006 CFAP43Q8NDM7 1665 aa16.4■□□□□ 0.22
SPIDR-222ENST00000524006 ERCC6L2Q5T890 1561 aa16.38■□□□□ 0.21
SPIDR-222ENST00000524006 NUP160Q12769 1436 aa16.36■□□□□ 0.21
SPIDR-222ENST00000524006 ADAMTS12P58397 1594 aa16.36■□□□□ 0.21
SPIDR-222ENST00000524006 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
SPIDR-222ENST00000524006 CEP170Q5SW79 1584 aa16.34■□□□□ 0.21
SPIDR-222ENST00000524006 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
SPIDR-222ENST00000524006 TIAM1Q13009 1591 aa16.32■□□□□ 0.2
SPIDR-222ENST00000524006 CCER1Q8TC90 406 aaPredicted RBP16.31■□□□□ 0.2
SPIDR-222ENST00000524006 MAP3K1Q13233 1512 aa16.28■□□□□ 0.2
SPIDR-222ENST00000524006 SHROOM2Q13796 1616 aa16.27■□□□□ 0.2
SPIDR-222ENST00000524006 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
SPIDR-222ENST00000524006 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
SPIDR-222ENST00000524006 FOXD1Q16676 465 aa16.24■□□□□ 0.19
SPIDR-222ENST00000524006 IQGAP2Q13576 1575 aa16.23■□□□□ 0.19
SPIDR-222ENST00000524006 FMN1Q68DA7 1419 aa16.21■□□□□ 0.19
SPIDR-222ENST00000524006 PRG4Q92954 1404 aaPredicted RBP16.21■□□□□ 0.19
SPIDR-222ENST00000524006 FHOD3Q2V2M9 1422 aa16.2■□□□□ 0.18
SPIDR-222ENST00000524006 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.2■□□□□ 0.18
SPIDR-222ENST00000524006 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
SPIDR-222ENST00000524006 HNRNPUL2Q1KMD3 747 aaKnown RBP16.16■□□□□ 0.18
SPIDR-222ENST00000524006 CASKIN1Q8WXD9 1431 aa16.16■□□□□ 0.18
SPIDR-222ENST00000524006 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
SPIDR-222ENST00000524006 P3H3Q8IVL6 736 aa16.14■□□□□ 0.17
SPIDR-222ENST00000524006 ATP1B4Q9UN42 357 aaPredicted RBP16.14■□□□□ 0.17
SPIDR-222ENST00000524006 LRRC9Q6ZRR7 1453 aa16.14■□□□□ 0.17
SPIDR-222ENST00000524006 LRRIQ1Q96JM4 1722 aa16.13■□□□□ 0.17
SPIDR-222ENST00000524006 RRBP1Q9P2E9 1410 aaKnown RBP16.12■□□□□ 0.17
SPIDR-222ENST00000524006 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
SPIDR-222ENST00000524006 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
SPIDR-222ENST00000524006 KIF13AQ9H1H9 1805 aa16.1■□□□□ 0.17
SPIDR-222ENST00000524006 CCNB3Q8WWL7 1395 aa16.09■□□□□ 0.17
SPIDR-222ENST00000524006 CCDC18Q5T9S5 1454 aa16.08■□□□□ 0.16
SPIDR-222ENST00000524006 EHBP1L1Q8N3D4 1523 aa16.07■□□□□ 0.16
SPIDR-222ENST00000524006 ABCC10Q5T3U5 1492 aa16.06■□□□□ 0.16
SPIDR-222ENST00000524006 FAM69CQ0P6D2 419 aa16.06■□□□□ 0.16
SPIDR-222ENST00000524006 KIAA0586Q9BVV6 1533 aa16.04■□□□□ 0.16
SPIDR-222ENST00000524006 UGGT2Q9NYU1 1516 aa16.04■□□□□ 0.16
SPIDR-222ENST00000524006 KIAA0556O60303 1618 aa16.04■□□□□ 0.16
SPIDR-222ENST00000524006 ADCY10Q96PN6 1610 aa16.04■□□□□ 0.16
SPIDR-222ENST00000524006 MAPKBP1O60336 1514 aa16.04■□□□□ 0.16
SPIDR-222ENST00000524006 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
SPIDR-222ENST00000524006 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
SPIDR-222ENST00000524006 DIP2BQ9P265 1576 aa16■□□□□ 0.15
SPIDR-222ENST00000524006 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
SPIDR-222ENST00000524006 RAPGEF6Q8TEU7 1601 aa15.97■□□□□ 0.15
SPIDR-222ENST00000524006 ITGAEP38570 1179 aa15.94■□□□□ 0.14
SPIDR-222ENST00000524006 PTPRGP23470 1445 aa15.94■□□□□ 0.14
SPIDR-222ENST00000524006 PHLDB1Q86UU1 1377 aa15.93■□□□□ 0.14
SPIDR-222ENST00000524006 FAM50AQ14320 339 aaKnown RBP15.93■□□□□ 0.14
SPIDR-222ENST00000524006 PTPN23Q9H3S7 1636 aa15.9■□□□□ 0.14
SPIDR-222ENST00000524006 FGD6Q6ZV73 1430 aa15.9■□□□□ 0.14
SPIDR-222ENST00000524006 CLSPNQ9HAW4 1339 aa15.9■□□□□ 0.14
SPIDR-222ENST00000524006 NCOA2Q15596 1464 aa15.9■□□□□ 0.14
SPIDR-222ENST00000524006 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
SPIDR-222ENST00000524006 CARMIL2Q6F5E8 1435 aa15.89■□□□□ 0.13
SPIDR-222ENST00000524006 ITSN2Q9NZM3 1697 aa15.89■□□□□ 0.13
SPIDR-222ENST00000524006 MYOM3Q5VTT5 1437 aa15.87■□□□□ 0.13
SPIDR-222ENST00000524006 CDK13Q14004 1512 aaKnown RBP15.87■□□□□ 0.13
SPIDR-222ENST00000524006 DISP1Q96F81 1524 aa15.87■□□□□ 0.13
SPIDR-222ENST00000524006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.87■□□□□ 0.13
SPIDR-222ENST00000524006 KDM6BO15054 1643 aa15.86■□□□□ 0.13
SPIDR-222ENST00000524006 ABCC2Q92887 1545 aa15.86■□□□□ 0.13
SPIDR-222ENST00000524006 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
SPIDR-222ENST00000524006 SETD5Q9C0A6 1442 aa15.85■□□□□ 0.13
SPIDR-222ENST00000524006 DHX57Q6P158 1386 aaKnown RBP15.84■□□□□ 0.13
SPIDR-222ENST00000524006 TSPOAP1O95153 1857 aa15.84■□□□□ 0.13
SPIDR-222ENST00000524006 ASXL2Q76L83 1435 aa15.84■□□□□ 0.13
SPIDR-222ENST00000524006 GCC2Q8IWJ2 1684 aa15.83■□□□□ 0.13
SPIDR-222ENST00000524006 UHRF1BP1LA0JNW5 1464 aa15.82■□□□□ 0.12
SPIDR-222ENST00000524006 MAGI3Q5TCQ9 1506 aa15.82■□□□□ 0.12
SPIDR-222ENST00000524006 PLB1Q6P1J6 1458 aa15.81■□□□□ 0.12
SPIDR-222ENST00000524006 UACAQ9BZF9 1416 aa15.81■□□□□ 0.12
SPIDR-222ENST00000524006 RAB3GAP2Q9H2M9 1393 aa15.81■□□□□ 0.12
SPIDR-222ENST00000524006 GLI2P10070 1586 aa15.79■□□□□ 0.12
SPIDR-222ENST00000524006 CDK11AQ9UQ88 783 aaPredicted RBP15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms