RNA–Protein interactions for RNA: ENST00000513858.5

SEC31A-237, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC31A, Length 3,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-237ENST00000513858 MYT1Q01538 1121 aa7.54□□□□□ -1.2
SEC31A-237ENST00000513858 IFT140Q96RY7 1462 aa7.53□□□□□ -1.2
SEC31A-237ENST00000513858 NCBP3Q53F19 620 aaKnown RBP7.53□□□□□ -1.2
SEC31A-237ENST00000513858 DCAF8L1A6NGE4 600 aa7.53□□□□□ -1.2
SEC31A-237ENST00000513858 PELP1Q8IZL8 1130 aaKnown RBP7.53□□□□□ -1.2
SEC31A-237ENST00000513858 NPM3O75607 178 aaKnown RBP7.52□□□□□ -1.21
SEC31A-237ENST00000513858 GAPVD1Q14C86 1478 aa7.52□□□□□ -1.21
SEC31A-237ENST00000513858 HOXD11P31277 338 aaPredicted RBP7.52□□□□□ -1.21
SEC31A-237ENST00000513858 ARAP1Q96P48 1450 aa7.51□□□□□ -1.21
SEC31A-237ENST00000513858 SAMD9Q5K651 1589 aa7.5□□□□□ -1.21
SEC31A-237ENST00000513858 RNF216Q9NWF9 866 aaPredicted RBP7.5□□□□□ -1.21
SEC31A-237ENST00000513858 AQRO60306 1485 aaKnown RBP eCLIP7.49□□□□□ -1.217e-7■■■■□ 21.1
SEC31A-237ENST00000513858 ERCC6Q03468 1493 aa7.49□□□□□ -1.21
SEC31A-237ENST00000513858 ARHGAP35Q9NRY4 1499 aa7.49□□□□□ -1.21
SEC31A-237ENST00000513858 TDRD9Q8NDG6 1382 aaKnown RBP7.48□□□□□ -1.21
SEC31A-237ENST00000513858 LRRIQ1Q96JM4 1722 aa7.48□□□□□ -1.21
SEC31A-237ENST00000513858 CARMIL1Q5VZK9 1371 aa7.48□□□□□ -1.21
SEC31A-237ENST00000513858 GRIN2BQ13224 1484 aa7.46□□□□□ -1.21
SEC31A-237ENST00000513858 CEP170Q5SW79 1584 aa7.45□□□□□ -1.22
SEC31A-237ENST00000513858 CLIP1P30622 1438 aa7.45□□□□□ -1.22
SEC31A-237ENST00000513858 FHAD1B1AJZ9 1412 aa7.44□□□□□ -1.22
SEC31A-237ENST00000513858 SNAPC4Q5SXM2 1469 aa7.44□□□□□ -1.22
SEC31A-237ENST00000513858 VPS8Q8N3P4 1428 aa7.43□□□□□ -1.22
SEC31A-237ENST00000513858 MAGI1Q96QZ7 1491 aaPredicted RBP7.43□□□□□ -1.22
SEC31A-237ENST00000513858 EFCAB5A4FU69 1503 aa7.43□□□□□ -1.22
SEC31A-237ENST00000513858 EHMT2Q96KQ7 1210 aa7.42□□□□□ -1.22
SEC31A-237ENST00000513858 CFAP43Q8NDM7 1665 aa7.42□□□□□ -1.22
SEC31A-237ENST00000513858 GRIN2AQ12879 1464 aa7.42□□□□□ -1.22
SEC31A-237ENST00000513858 CHD1O14646 1710 aa7.41□□□□□ -1.22
SEC31A-237ENST00000513858 IQGAP2Q13576 1575 aa7.41□□□□□ -1.22
SEC31A-237ENST00000513858 PCF11O94913 1555 aaKnown RBP7.41□□□□□ -1.22
SEC31A-237ENST00000513858 UGGT2Q9NYU1 1516 aa7.41□□□□□ -1.22
SEC31A-237ENST00000513858 SYNJ2O15056 1496 aa7.4□□□□□ -1.23
SEC31A-237ENST00000513858 NUP160Q12769 1436 aa7.4□□□□□ -1.23
SEC31A-237ENST00000513858 SHROOM2Q13796 1616 aa7.39□□□□□ -1.23
SEC31A-237ENST00000513858 DISP1Q96F81 1524 aa7.39□□□□□ -1.23
SEC31A-237ENST00000513858 MAP3K1Q13233 1512 aa7.38□□□□□ -1.23
SEC31A-237ENST00000513858 KIAA0556O60303 1618 aa7.38□□□□□ -1.23
SEC31A-237ENST00000513858 TIAM1Q13009 1591 aa7.36□□□□□ -1.23
SEC31A-237ENST00000513858 UBTFP17480 764 aaKnown RBP7.36□□□□□ -1.23
SEC31A-237ENST00000513858 KIAA0586Q9BVV6 1533 aa7.36□□□□□ -1.23
SEC31A-237ENST00000513858 CLASP1Q7Z460 1538 aa7.35□□□□□ -1.23
SEC31A-237ENST00000513858 FYCO1Q9BQS8 1478 aa7.34□□□□□ -1.23
SEC31A-237ENST00000513858 FHOD3Q2V2M9 1422 aa7.33□□□□□ -1.24
SEC31A-237ENST00000513858 MAGI3Q5TCQ9 1506 aa7.32□□□□□ -1.24
SEC31A-237ENST00000513858 TTBK1Q5TCY1 1321 aaPredicted RBP7.32□□□□□ -1.24
SEC31A-237ENST00000513858 CASKIN1Q8WXD9 1431 aa7.32□□□□□ -1.24
SEC31A-237ENST00000513858 ARHGEF11O15085 1522 aa7.31□□□□□ -1.24
SEC31A-237ENST00000513858 LRRC9Q6ZRR7 1453 aa7.29□□□□□ -1.24
SEC31A-237ENST00000513858 ERCC6L2Q5T890 1561 aa7.29□□□□□ -1.24
SEC31A-237ENST00000513858 ABCA8O94911 1581 aa7.28□□□□□ -1.24
SEC31A-237ENST00000513858 RAPGEF6Q8TEU7 1601 aa7.28□□□□□ -1.24
SEC31A-237ENST00000513858 HECW1Q76N89 1606 aa7.28□□□□□ -1.24
SEC31A-237ENST00000513858 TRIM26Q12899 539 aaPredicted RBP7.27□□□□□ -1.25
SEC31A-237ENST00000513858 FMN1Q68DA7 1419 aa7.27□□□□□ -1.25
SEC31A-237ENST00000513858 KANK4Q5T7N3 995 aaPredicted RBP7.26□□□□□ -1.25
SEC31A-237ENST00000513858 RRBP1Q9P2E9 1410 aaKnown RBP7.26□□□□□ -1.25
SEC31A-237ENST00000513858 NUP153P49790 1475 aaKnown RBP7.26□□□□□ -1.25
SEC31A-237ENST00000513858 ADCY10Q96PN6 1610 aa7.26□□□□□ -1.25
SEC31A-237ENST00000513858 EPRSP07814 1512 aaKnown RBP7.24□□□□□ -1.25
SEC31A-237ENST00000513858 CDK13Q14004 1512 aaKnown RBP7.23□□□□□ -1.25
SEC31A-237ENST00000513858 PCGF6Q9BYE7 350 aa7.23□□□□□ -1.25
SEC31A-237ENST00000513858 PPARGC1BQ86YN6 1023 aaKnown RBP7.23□□□□□ -1.25
SEC31A-237ENST00000513858 CCDC18Q5T9S5 1454 aa7.22□□□□□ -1.25
SEC31A-237ENST00000513858 EHBP1L1Q8N3D4 1523 aa7.22□□□□□ -1.25
SEC31A-237ENST00000513858 PLB1Q6P1J6 1458 aa7.22□□□□□ -1.25
SEC31A-237ENST00000513858 SUPT6HQ7KZ85 1726 aaKnown RBP7.21□□□□□ -1.25
SEC31A-237ENST00000513858 RANGAP1P46060 587 aaPredicted RBP7.21□□□□□ -1.25
SEC31A-237ENST00000513858 PHLDB1Q86UU1 1377 aa7.21□□□□□ -1.25
SEC31A-237ENST00000513858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.21□□□□□ -1.264e-7■■□□□ 12.2
SEC31A-237ENST00000513858 RNF39Q9H2S5 420 aa7.21□□□□□ -1.26
SEC31A-237ENST00000513858 KIF14Q15058 1648 aa7.19□□□□□ -1.26
SEC31A-237ENST00000513858 P3H3Q8IVL6 736 aa7.19□□□□□ -1.26
SEC31A-237ENST00000513858 CHMP7Q8WUX9 453 aaPredicted RBP7.19□□□□□ -1.26
SEC31A-237ENST00000513858 PRG4Q92954 1404 aaPredicted RBP7.18□□□□□ -1.26
SEC31A-237ENST00000513858 TCOF1Q13428 1488 aaKnown RBP7.17□□□□□ -1.26
SEC31A-237ENST00000513858 NCOA2Q15596 1464 aa7.17□□□□□ -1.26
SEC31A-237ENST00000513858 CDC42BPAQ5VT25 1732 aa7.17□□□□□ -1.26
SEC31A-237ENST00000513858 JPH4Q96JJ6 628 aa7.17□□□□□ -1.26
SEC31A-237ENST00000513858 ZCCHC11Q5TAX3 1644 aaKnown RBP7.16□□□□□ -1.26
SEC31A-237ENST00000513858 ABCC2Q92887 1545 aa7.16□□□□□ -1.26
SEC31A-237ENST00000513858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.16□□□□□ -1.26
SEC31A-237ENST00000513858 ATP10BO94823 1461 aa7.16□□□□□ -1.26
SEC31A-237ENST00000513858 CROCC2H7BZ55 1655 aa7.16□□□□□ -1.26
SEC31A-237ENST00000513858 UHRF1BP1LA0JNW5 1464 aa7.16□□□□□ -1.26
SEC31A-237ENST00000513858 ABCC10Q5T3U5 1492 aa7.16□□□□□ -1.26
SEC31A-237ENST00000513858 SLC4A2P04920 1241 aa7.15□□□□□ -1.26
SEC31A-237ENST00000513858 PTPN23Q9H3S7 1636 aa7.15□□□□□ -1.26
SEC31A-237ENST00000513858 CACNB1Q02641 598 aaPredicted RBP7.15□□□□□ -1.26
SEC31A-237ENST00000513858 KDM5BQ9UGL1 1544 aa7.15□□□□□ -1.26
SEC31A-237ENST00000513858 CARMIL2Q6F5E8 1435 aa7.14□□□□□ -1.27
SEC31A-237ENST00000513858 CDC42BPBQ9Y5S2 1711 aa7.14□□□□□ -1.27
SEC31A-237ENST00000513858 PTPRKQ15262 1439 aa7.14□□□□□ -1.27
SEC31A-237ENST00000513858 FGD6Q6ZV73 1430 aa7.14□□□□□ -1.27
SEC31A-237ENST00000513858 SLC4A1APQ9BWU0 796 aaKnown RBP7.14□□□□□ -1.27
SEC31A-237ENST00000513858 CCNB3Q8WWL7 1395 aa7.13□□□□□ -1.27
SEC31A-237ENST00000513858 MYOM3Q5VTT5 1437 aa7.13□□□□□ -1.27
SEC31A-237ENST00000513858 ITSN2Q9NZM3 1697 aa7.13□□□□□ -1.27
SEC31A-237ENST00000513858 TTC37Q6PGP7 1564 aa7.13□□□□□ -1.27
SEC31A-237ENST00000513858 GCC2Q8IWJ2 1684 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms