RNA–Protein interactions for RNA: ENST00000513858.5

SEC31A-237, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC31A, Length 3,687 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-237ENST00000513858 AEBP2Q6ZN18 517 aaPredicted RBP11.56□□□□□ -0.56
SEC31A-237ENST00000513858 CHIC1Q5VXU3 224 aa11.06□□□□□ -0.64
SEC31A-237ENST00000513858 NISCHQ9Y2I1 1504 aa10.87□□□□□ -0.67
SEC31A-237ENST00000513858 PHF23Q9BUL5 403 aaPredicted RBP9.79□□□□□ -0.84
SEC31A-237ENST00000513858 SENP3Q9H4L4 574 aaPredicted RBP9.72□□□□□ -0.85
SEC31A-237ENST00000513858 CCDC180Q9P1Z9 1646 aa9.55□□□□□ -0.88
SEC31A-237ENST00000513858 ZCCHC6Q5VYS8 1495 aaKnown RBP9.18□□□□□ -0.94
SEC31A-237ENST00000513858 FOXD1Q16676 465 aa9.12□□□□□ -0.95
SEC31A-237ENST00000513858 DCAF1Q9Y4B6 1507 aa9.05□□□□□ -0.96
SEC31A-237ENST00000513858 MYO15BQ96JP2 1530 aa8.95□□□□□ -0.98
SEC31A-237ENST00000513858 PLPPR3Q6T4P5 718 aa8.9□□□□□ -0.99
SEC31A-237ENST00000513858 ABCC9O60706 1549 aa8.83□□□□□ -1
SEC31A-237ENST00000513858 NACADO15069 1562 aa8.8□□□□□ -1
SEC31A-237ENST00000513858 UNC13AQ9UPW8 1703 aa8.73□□□□□ -1.01
SEC31A-237ENST00000513858 PPP6R1Q9UPN7 881 aa8.72□□□□□ -1.01
SEC31A-237ENST00000513858 RB1CC1Q8TDY2 1594 aa8.7□□□□□ -1.02
SEC31A-237ENST00000513858 ADRA2BP18089 450 aa8.69□□□□□ -1.02
SEC31A-237ENST00000513858 SCRIBQ14160 1630 aa8.68□□□□□ -1.02
SEC31A-237ENST00000513858 SHROOM4Q9ULL8 1493 aa8.65□□□□□ -1.02
SEC31A-237ENST00000513858 BICRAQ9NZM4 1560 aa8.59□□□□□ -1.04
SEC31A-237ENST00000513858 DCAF8L2P0C7V8 631 aa8.57□□□□□ -1.04
SEC31A-237ENST00000513858 PIAS4Q8N2W9 510 aaPredicted RBP8.56□□□□□ -1.04
SEC31A-237ENST00000513858 CECR2Q9BXF3 1484 aa8.43□□□□□ -1.06
SEC31A-237ENST00000513858 MROH2BQ7Z745 1585 aa8.4□□□□□ -1.06
SEC31A-237ENST00000513858 RSF1Q96T23 1441 aaPredicted RBP8.4□□□□□ -1.06
SEC31A-237ENST00000513858 SMARCA4P51532 1647 aa8.38□□□□□ -1.07
SEC31A-237ENST00000513858 MSH5O43196 834 aa8.36□□□□□ -1.07
SEC31A-237ENST00000513858 WIZO95785 1651 aa8.36□□□□□ -1.07
SEC31A-237ENST00000513858 PEG3Q9GZU2 1588 aa8.36□□□□□ -1.07
SEC31A-237ENST00000513858 BAZ1AQ9NRL2 1556 aaPredicted RBP8.36□□□□□ -1.07
SEC31A-237ENST00000513858 EIF4G1Q04637 1599 aaKnown RBP8.28□□□□□ -1.08
SEC31A-237ENST00000513858 PABPN1Q86U42 306 aaKnown RBP eCLIP8.25□□□□□ -1.092e-7■■■■□ 22
SEC31A-237ENST00000513858 TOP2AP11388 1531 aaKnown RBP8.25□□□□□ -1.09
SEC31A-237ENST00000513858 SUPT5HO00267 1087 aaKnown RBP8.24□□□□□ -1.09
SEC31A-237ENST00000513858 SMARCA2P51531 1590 aa8.2□□□□□ -1.1
SEC31A-237ENST00000513858 ATAD2BQ9ULI0 1458 aa8.19□□□□□ -1.1
SEC31A-237ENST00000513858 HMGXB3Q12766 1538 aa8.16□□□□□ -1.1
SEC31A-237ENST00000513858 CCDC88BA6NC98 1476 aa8.12□□□□□ -1.11
SEC31A-237ENST00000513858 NCAPD3P42695 1498 aa8.12□□□□□ -1.11
SEC31A-237ENST00000513858 CC2D2AQ9P2K1 1620 aa8.11□□□□□ -1.11
SEC31A-237ENST00000513858 BAZ1BQ9UIG0 1483 aaKnown RBP8.07□□□□□ -1.12
SEC31A-237ENST00000513858 PRDM2Q13029 1718 aa8.04□□□□□ -1.12
SEC31A-237ENST00000513858 POTEDQ86YR6 584 aa7.97□□□□□ -1.13
SEC31A-237ENST00000513858 ABCC8Q09428 1581 aa7.97□□□□□ -1.13
SEC31A-237ENST00000513858 MAPK8IP2Q13387 824 aaPredicted RBP7.96□□□□□ -1.14
SEC31A-237ENST00000513858 CFTRP13569 1480 aa7.95□□□□□ -1.14
SEC31A-237ENST00000513858 SYNJ1O43426 1573 aa7.94□□□□□ -1.14
SEC31A-237ENST00000513858 BIVM-ERCC5R4GMW8 1640 aa7.93□□□□□ -1.14
SEC31A-237ENST00000513858 TOP2BQ02880 1626 aa7.89□□□□□ -1.15
SEC31A-237ENST00000513858 DNAJC5BQ9UF47 199 aa7.88□□□□□ -1.15
SEC31A-237ENST00000513858 CUX1P39880 1505 aa7.86□□□□□ -1.15
SEC31A-237ENST00000513858 PPP4R3CPQ6ZMV5 832 aa7.86□□□□□ -1.15
SEC31A-237ENST00000513858 LAMC3Q9Y6N6 1575 aa7.85□□□□□ -1.15
SEC31A-237ENST00000513858 CADPSQ9ULU8 1353 aa7.84□□□□□ -1.15
SEC31A-237ENST00000513858 NESP48681 1621 aa7.83□□□□□ -1.16
SEC31A-237ENST00000513858 WRNQ14191 1432 aaPredicted RBP eCLIP7.83□□□□□ -1.16
SEC31A-237ENST00000513858 KIF21AQ7Z4S6 1674 aa7.83□□□□□ -1.16
SEC31A-237ENST00000513858 WDR97A6NE52 1622 aa7.81□□□□□ -1.16
SEC31A-237ENST00000513858 SCAF1Q9H7N4 1312 aaKnown RBP7.8□□□□□ -1.16
SEC31A-237ENST00000513858 RUSC2Q8N2Y8 1516 aa7.79□□□□□ -1.16
SEC31A-237ENST00000513858 SOGA1O94964 1423 aa7.78□□□□□ -1.16
SEC31A-237ENST00000513858 FANCD2Q9BXW9 1451 aa7.77□□□□□ -1.17
SEC31A-237ENST00000513858 DNMBPQ6XZF7 1577 aa7.76□□□□□ -1.17
SEC31A-237ENST00000513858 URB2Q14146 1524 aaKnown RBP7.75□□□□□ -1.17
SEC31A-237ENST00000513858 TRIM41Q8WV44 630 aa7.75□□□□□ -1.17
SEC31A-237ENST00000513858 DMRT2Q9Y5R5 561 aa7.75□□□□□ -1.17
SEC31A-237ENST00000513858 KIF21BO75037 1637 aa7.73□□□□□ -1.17
SEC31A-237ENST00000513858 TOPBP1Q92547 1522 aa7.73□□□□□ -1.17
SEC31A-237ENST00000513858 THOC2Q8NI27 1593 aaKnown RBP7.73□□□□□ -1.17
SEC31A-237ENST00000513858 TARBP1Q13395 1621 aaKnown RBP7.72□□□□□ -1.17
SEC31A-237ENST00000513858 FGD5Q6ZNL6 1462 aa7.71□□□□□ -1.18
SEC31A-237ENST00000513858 CEP164Q9UPV0 1460 aa7.7□□□□□ -1.18
SEC31A-237ENST00000513858 ABCA5Q8WWZ7 1642 aa7.7□□□□□ -1.18
SEC31A-237ENST00000513858 EEA1Q15075 1411 aa7.7□□□□□ -1.18
SEC31A-237ENST00000513858 POLA1P09884 1462 aaPredicted RBP7.7□□□□□ -1.18
SEC31A-237ENST00000513858 WDR62O43379 1518 aa7.7□□□□□ -1.18
SEC31A-237ENST00000513858 ABCA10Q8WWZ4 1543 aa7.68□□□□□ -1.18
SEC31A-237ENST00000513858 PRXQ9BXM0 1461 aa7.67□□□□□ -1.18
SEC31A-237ENST00000513858 LOC105371045A0A1W2PR82 267 aa7.67□□□□□ -1.18
SEC31A-237ENST00000513858 PDS5BQ9NTI5 1447 aa7.66□□□□□ -1.18
SEC31A-237ENST00000513858 ERICH3Q5RHP9 1530 aa7.66□□□□□ -1.18
SEC31A-237ENST00000513858 CUX2O14529 1486 aa7.65□□□□□ -1.18
SEC31A-237ENST00000513858 MRC2Q9UBG0 1479 aa7.64□□□□□ -1.19
SEC31A-237ENST00000513858 RAD54L2Q9Y4B4 1467 aa7.64□□□□□ -1.19
SEC31A-237ENST00000513858 RAPGEF2Q9Y4G8 1499 aa7.63□□□□□ -1.19
SEC31A-237ENST00000513858 PBRM1Q86U86 1689 aa7.62□□□□□ -1.19
SEC31A-237ENST00000513858 CNKSR2Q8WXI2 1034 aa7.62□□□□□ -1.19
SEC31A-237ENST00000513858 GOLGA3Q08378 1498 aa7.6□□□□□ -1.19
SEC31A-237ENST00000513858 CUL7Q14999 1698 aa7.6□□□□□ -1.19
SEC31A-237ENST00000513858 IGF1RP08069 1367 aa7.59□□□□□ -1.19
SEC31A-237ENST00000513858 KIF27Q86VH2 1401 aa7.59□□□□□ -1.19
SEC31A-237ENST00000513858 TNIKQ9UKE5 1360 aa7.58□□□□□ -1.2
SEC31A-237ENST00000513858 CSRNP3Q8WYN3 585 aa7.58□□□□□ -1.2
SEC31A-237ENST00000513858 KCNA4P22459 653 aa7.58□□□□□ -1.2
SEC31A-237ENST00000513858 EIF4G3O43432 1585 aaKnown RBP7.57□□□□□ -1.2
SEC31A-237ENST00000513858 FAM9AQ8IZU1 332 aaPredicted RBP7.57□□□□□ -1.2
SEC31A-237ENST00000513858 CTTNBP2Q8WZ74 1663 aa7.56□□□□□ -1.2
SEC31A-237ENST00000513858 ADAMTS12P58397 1594 aa7.56□□□□□ -1.2
SEC31A-237ENST00000513858 CEP162Q5TB80 1403 aa7.55□□□□□ -1.2
SEC31A-237ENST00000513858 ZNF608Q9ULD9 1512 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms