RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 ZNF608Q9ULD9 1512 aaPredicted RBP29.39■■■□□ 2.3
ARHGEF28-205ENST00000503341 GRIN2BQ13224 1484 aa29.38■■■□□ 2.29
ARHGEF28-205ENST00000503341 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
ARHGEF28-205ENST00000503341 ADAMTS12P58397 1594 aa29.32■■■□□ 2.28
ARHGEF28-205ENST00000503341 EFCAB5A4FU69 1503 aa29.3■■■□□ 2.28
ARHGEF28-205ENST00000503341 EIF4G3O43432 1585 aaKnown RBP29.25■■■□□ 2.27
ARHGEF28-205ENST00000503341 P3H3Q8IVL6 736 aa29.22■■■□□ 2.27
ARHGEF28-205ENST00000503341 FHOD3Q2V2M9 1422 aa29.2■■■□□ 2.26
ARHGEF28-205ENST00000503341 KANK4Q5T7N3 995 aaPredicted RBP29.2■■■□□ 2.26
ARHGEF28-205ENST00000503341 SNAPC4Q5SXM2 1469 aa29.16■■■□□ 2.26
ARHGEF28-205ENST00000503341 SAMD9Q5K651 1589 aa29.16■■■□□ 2.26
ARHGEF28-205ENST00000503341 MAP3K1Q13233 1512 aa29.16■■■□□ 2.26
ARHGEF28-205ENST00000503341 PCF11O94913 1555 aaKnown RBP29.1■■■□□ 2.25
ARHGEF28-205ENST00000503341 TIAM1Q13009 1591 aa29.1■■■□□ 2.25
ARHGEF28-205ENST00000503341 MAGI1Q96QZ7 1491 aaPredicted RBP29.08■■■□□ 2.25
ARHGEF28-205ENST00000503341 IQGAP2Q13576 1575 aa29.07■■■□□ 2.24
ARHGEF28-205ENST00000503341 FMN1Q68DA7 1419 aa29.07■■■□□ 2.24
ARHGEF28-205ENST00000503341 CASKIN1Q8WXD9 1431 aa29.06■■■□□ 2.24
ARHGEF28-205ENST00000503341 FYCO1Q9BQS8 1478 aa29.05■■■□□ 2.24
ARHGEF28-205ENST00000503341 GRIN2AQ12879 1464 aa29.04■■■□□ 2.24
ARHGEF28-205ENST00000503341 ZEB1P37275 1124 aaPredicted RBP29.04■■■□□ 2.24
ARHGEF28-205ENST00000503341 CFAP43Q8NDM7 1665 aa28.99■■■□□ 2.23
ARHGEF28-205ENST00000503341 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
ARHGEF28-205ENST00000503341 LRRC9Q6ZRR7 1453 aa28.98■■■□□ 2.23
ARHGEF28-205ENST00000503341 KIAA0586Q9BVV6 1533 aa28.97■■■□□ 2.23
ARHGEF28-205ENST00000503341 UGGT2Q9NYU1 1516 aa28.94■■■□□ 2.22
ARHGEF28-205ENST00000503341 ATP1B4Q9UN42 357 aaPredicted RBP28.94■■■□□ 2.22
ARHGEF28-205ENST00000503341 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.94■■■□□ 2.22
ARHGEF28-205ENST00000503341 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
ARHGEF28-205ENST00000503341 RRBP1Q9P2E9 1410 aaKnown RBP28.93■■■□□ 2.22
ARHGEF28-205ENST00000503341 HNRNPUL2Q1KMD3 747 aaKnown RBP28.91■■■□□ 2.22
ARHGEF28-205ENST00000503341 CCER1Q8TC90 406 aaPredicted RBP28.86■■■□□ 2.21
ARHGEF28-205ENST00000503341 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
ARHGEF28-205ENST00000503341 FBLN2P98095 1184 aa28.82■■■□□ 2.2
ARHGEF28-205ENST00000503341 NUP160Q12769 1436 aa28.81■■■□□ 2.2
ARHGEF28-205ENST00000503341 CCNB3Q8WWL7 1395 aa28.8■■■□□ 2.2
ARHGEF28-205ENST00000503341 DISP1Q96F81 1524 aa28.8■■■□□ 2.2
ARHGEF28-205ENST00000503341 LRRIQ1Q96JM4 1722 aa28.79■■■□□ 2.2
ARHGEF28-205ENST00000503341 KIAA0556O60303 1618 aa28.77■■■□□ 2.2
ARHGEF28-205ENST00000503341 PHLDB1Q86UU1 1377 aa28.76■■■□□ 2.19
ARHGEF28-205ENST00000503341 HECW1Q76N89 1606 aa28.71■■■□□ 2.19
ARHGEF28-205ENST00000503341 CCDC18Q5T9S5 1454 aa28.69■■■□□ 2.18
ARHGEF28-205ENST00000503341 MTUS2Q5JR59 1369 aa28.68■■■□□ 2.18
ARHGEF28-205ENST00000503341 JPH4Q96JJ6 628 aa28.65■■■□□ 2.18
ARHGEF28-205ENST00000503341 EPRSP07814 1512 aaKnown RBP28.62■■■□□ 2.17
ARHGEF28-205ENST00000503341 EHBP1L1Q8N3D4 1523 aa28.61■■■□□ 2.17
ARHGEF28-205ENST00000503341 CARMIL2Q6F5E8 1435 aa28.58■■■□□ 2.17
ARHGEF28-205ENST00000503341 MAGI3Q5TCQ9 1506 aa28.57■■■□□ 2.16
ARHGEF28-205ENST00000503341 CHD1O14646 1710 aa28.55■■■□□ 2.16
ARHGEF28-205ENST00000503341 NCOA2Q15596 1464 aa28.55■■■□□ 2.16
ARHGEF28-205ENST00000503341 SUPT6HQ7KZ85 1726 aaKnown RBP28.55■■■□□ 2.16
ARHGEF28-205ENST00000503341 RAPGEF6Q8TEU7 1601 aa28.54■■■□□ 2.16
ARHGEF28-205ENST00000503341 CDK13Q14004 1512 aaKnown RBP28.54■■■□□ 2.16
ARHGEF28-205ENST00000503341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.53■■■□□ 2.16
ARHGEF28-205ENST00000503341 ITGAEP38570 1179 aa28.52■■■□□ 2.16
ARHGEF28-205ENST00000503341 FAM50AQ14320 339 aaKnown RBP28.51■■■□□ 2.16
ARHGEF28-205ENST00000503341 NUP153P49790 1475 aaKnown RBP28.51■■■□□ 2.15
ARHGEF28-205ENST00000503341 FGD6Q6ZV73 1430 aa28.5■■■□□ 2.15
ARHGEF28-205ENST00000503341 ARHGEF11O15085 1522 aa28.5■■■□□ 2.15
ARHGEF28-205ENST00000503341 MYOM3Q5VTT5 1437 aa28.46■■■□□ 2.15
ARHGEF28-205ENST00000503341 ARID3CA6NKF2 412 aa28.44■■■□□ 2.14
ARHGEF28-205ENST00000503341 PLB1Q6P1J6 1458 aa28.43■■■□□ 2.14
ARHGEF28-205ENST00000503341 PRG4Q92954 1404 aaPredicted RBP28.4■■■□□ 2.14
ARHGEF28-205ENST00000503341 DHX57Q6P158 1386 aaKnown RBP28.37■■■□□ 2.13
ARHGEF28-205ENST00000503341 SHROOM2Q13796 1616 aa28.35■■■□□ 2.13
ARHGEF28-205ENST00000503341 ABCA8O94911 1581 aa28.35■■■□□ 2.13
ARHGEF28-205ENST00000503341 CDK11AQ9UQ88 783 aaPredicted RBP28.33■■■□□ 2.13
ARHGEF28-205ENST00000503341 SETD5Q9C0A6 1442 aa28.33■■■□□ 2.13
ARHGEF28-205ENST00000503341 RAB3GAP2Q9H2M9 1393 aa28.33■■■□□ 2.12
ARHGEF28-205ENST00000503341 CLSPNQ9HAW4 1339 aa28.31■■■□□ 2.12
ARHGEF28-205ENST00000503341 PTPN23Q9H3S7 1636 aa28.31■■■□□ 2.12
ARHGEF28-205ENST00000503341 PTPRGP23470 1445 aa28.28■■■□□ 2.12
ARHGEF28-205ENST00000503341 TCOF1Q13428 1488 aaKnown RBP28.28■■■□□ 2.12
ARHGEF28-205ENST00000503341 MIA2Q96PC5 1412 aa28.26■■■□□ 2.11
ARHGEF28-205ENST00000503341 TROQ12816 1431 aaPredicted RBP28.26■■■□□ 2.11
ARHGEF28-205ENST00000503341 PTPRKQ15262 1439 aa28.23■■■□□ 2.11
ARHGEF28-205ENST00000503341 CLASP1Q7Z460 1538 aa28.23■■■□□ 2.11
ARHGEF28-205ENST00000503341 ATP10BO94823 1461 aa28.2■■■□□ 2.11
ARHGEF28-205ENST00000503341 ADCY10Q96PN6 1610 aa28.17■■■□□ 2.1
ARHGEF28-205ENST00000503341 ERCC6L2Q5T890 1561 aa28.16■■■□□ 2.1
ARHGEF28-205ENST00000503341 HFM1A2PYH4 1435 aa28.13■■■□□ 2.09
ARHGEF28-205ENST00000503341 UACAQ9BZF9 1416 aa28.12■■■□□ 2.09
ARHGEF28-205ENST00000503341 PLEKHD1A6NEE1 506 aa28.12■■■□□ 2.09
ARHGEF28-205ENST00000503341 KIF14Q15058 1648 aa28.1■■■□□ 2.09
ARHGEF28-205ENST00000503341 NAIPQ13075 1403 aa28.07■■■□□ 2.08
ARHGEF28-205ENST00000503341 GPATCH8Q9UKJ3 1502 aaKnown RBP28.05■■■□□ 2.08
ARHGEF28-205ENST00000503341 MAPKBP1O60336 1514 aa28.05■■■□□ 2.08
ARHGEF28-205ENST00000503341 ITSN2Q9NZM3 1697 aa28.05■■■□□ 2.08
ARHGEF28-205ENST00000503341 ZNF644Q9H582 1327 aaPredicted RBP28■■■□□ 2.07
ARHGEF28-205ENST00000503341 ABCC2Q92887 1545 aa28■■■□□ 2.07
ARHGEF28-205ENST00000503341 ABCC10Q5T3U5 1492 aa28■■■□□ 2.07
ARHGEF28-205ENST00000503341 AKNAQ7Z591 1439 aa28■■■□□ 2.07
ARHGEF28-205ENST00000503341 CFDP1Q9UEE9 299 aaPredicted RBP27.99■■■□□ 2.07
ARHGEF28-205ENST00000503341 DAPK1P53355 1430 aa27.98■■■□□ 2.07
ARHGEF28-205ENST00000503341 DNMT1P26358 1616 aaKnown RBP27.98■■■□□ 2.07
ARHGEF28-205ENST00000503341 CHIC2Q9UKJ5 165 aa27.98■■■□□ 2.07
ARHGEF28-205ENST00000503341 ABCC5O15440 1437 aa27.96■■■□□ 2.07
ARHGEF28-205ENST00000503341 GCC2Q8IWJ2 1684 aa27.95■■■□□ 2.07
ARHGEF28-205ENST00000503341 CAMSAP2Q08AD1 1489 aa27.95■■■□□ 2.06
ARHGEF28-205ENST00000503341 RRP7BPQ9NSQ0 103 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 132 ms