RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 ABCA5Q8WWZ7 1642 aa20.55■□□□□ 0.88
ATP13A1-214ENST00000497556 WDR62O43379 1518 aa20.55■□□□□ 0.88
ATP13A1-214ENST00000497556 CARMIL1Q5VZK9 1371 aa20.54■□□□□ 0.88
ATP13A1-214ENST00000497556 CLSPNQ9HAW4 1339 aa20.53■□□□□ 0.88
ATP13A1-214ENST00000497556 TDRD9Q8NDG6 1382 aaKnown RBP20.51■□□□□ 0.87
ATP13A1-214ENST00000497556 CUL7Q14999 1698 aa20.5■□□□□ 0.87
ATP13A1-214ENST00000497556 THOC2Q8NI27 1593 aaKnown RBP20.49■□□□□ 0.87
ATP13A1-214ENST00000497556 GAPVD1Q14C86 1478 aa20.48■□□□□ 0.87
ATP13A1-214ENST00000497556 SUPT16HQ9Y5B9 1047 aaKnown RBP20.48■□□□□ 0.87
ATP13A1-214ENST00000497556 RANGAP1P46060 587 aaPredicted RBP20.47■□□□□ 0.87
ATP13A1-214ENST00000497556 TSHZ2Q9NRE2 1034 aa20.47■□□□□ 0.87
ATP13A1-214ENST00000497556 PBRM1Q86U86 1689 aa20.42■□□□□ 0.86
ATP13A1-214ENST00000497556 IFT140Q96RY7 1462 aa20.4■□□□□ 0.86
ATP13A1-214ENST00000497556 VPS8Q8N3P4 1428 aa20.38■□□□□ 0.85
ATP13A1-214ENST00000497556 AQRO60306 1485 aaKnown RBP eCLIP20.36■□□□□ 0.855e-7■■■■□ 20.1
ATP13A1-214ENST00000497556 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
ATP13A1-214ENST00000497556 HNRNPUL2Q1KMD3 747 aaKnown RBP20.34■□□□□ 0.85
ATP13A1-214ENST00000497556 ZNF608Q9ULD9 1512 aaPredicted RBP20.34■□□□□ 0.85
ATP13A1-214ENST00000497556 CTTNBP2Q8WZ74 1663 aa20.34■□□□□ 0.85
ATP13A1-214ENST00000497556 ARHGAP35Q9NRY4 1499 aa20.32■□□□□ 0.84
ATP13A1-214ENST00000497556 EIF4G3O43432 1585 aaKnown RBP20.29■□□□□ 0.84
ATP13A1-214ENST00000497556 GRIN2BQ13224 1484 aa20.28■□□□□ 0.84
ATP13A1-214ENST00000497556 ADAMTS12P58397 1594 aa20.28■□□□□ 0.84
ATP13A1-214ENST00000497556 FHAD1B1AJZ9 1412 aa20.24■□□□□ 0.83
ATP13A1-214ENST00000497556 SNAPC4Q5SXM2 1469 aa20.17■□□□□ 0.82
ATP13A1-214ENST00000497556 EFCAB5A4FU69 1503 aa20.17■□□□□ 0.82
ATP13A1-214ENST00000497556 APLP2Q06481 763 aa20.16■□□□□ 0.82
ATP13A1-214ENST00000497556 PRKCSHP14314 528 aaPredicted RBP20.15■□□□□ 0.82
ATP13A1-214ENST00000497556 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
ATP13A1-214ENST00000497556 P3H3Q8IVL6 736 aa20.1■□□□□ 0.81
ATP13A1-214ENST00000497556 MAGI1Q96QZ7 1491 aaPredicted RBP20.1■□□□□ 0.81
ATP13A1-214ENST00000497556 SAMD9Q5K651 1589 aa20.09■□□□□ 0.81
ATP13A1-214ENST00000497556 IQGAP2Q13576 1575 aa20.07■□□□□ 0.8
ATP13A1-214ENST00000497556 GRIN2AQ12879 1464 aa20.06■□□□□ 0.8
ATP13A1-214ENST00000497556 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
ATP13A1-214ENST00000497556 SYNJ2O15056 1496 aa20.03■□□□□ 0.8
ATP13A1-214ENST00000497556 TIAM1Q13009 1591 aa20■□□□□ 0.79
ATP13A1-214ENST00000497556 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
ATP13A1-214ENST00000497556 FMN1Q68DA7 1419 aa19.97■□□□□ 0.79
ATP13A1-214ENST00000497556 CFAP43Q8NDM7 1665 aa19.97■□□□□ 0.79
ATP13A1-214ENST00000497556 MAP3K1Q13233 1512 aa19.97■□□□□ 0.79
ATP13A1-214ENST00000497556 KIAA0586Q9BVV6 1533 aa19.97■□□□□ 0.79
ATP13A1-214ENST00000497556 FYCO1Q9BQS8 1478 aa19.97■□□□□ 0.79
ATP13A1-214ENST00000497556 CHMP7Q8WUX9 453 aaPredicted RBP19.97■□□□□ 0.79
ATP13A1-214ENST00000497556 CEP170Q5SW79 1584 aa19.96■□□□□ 0.79
ATP13A1-214ENST00000497556 CASKIN1Q8WXD9 1431 aa19.95■□□□□ 0.78
ATP13A1-214ENST00000497556 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
ATP13A1-214ENST00000497556 RBM19Q9Y4C8 960 aaKnown RBP19.94■□□□□ 0.78
ATP13A1-214ENST00000497556 FBLN2P98095 1184 aa19.93■□□□□ 0.78
ATP13A1-214ENST00000497556 ATP1B4Q9UN42 357 aaPredicted RBP19.91■□□□□ 0.78
ATP13A1-214ENST00000497556 NUP160Q12769 1436 aa19.89■□□□□ 0.77
ATP13A1-214ENST00000497556 DHX57Q6P158 1386 aaKnown RBP19.89■□□□□ 0.77
ATP13A1-214ENST00000497556 LRRIQ1Q96JM4 1722 aa19.89■□□□□ 0.77
ATP13A1-214ENST00000497556 BCANQ96GW7 911 aa19.88■□□□□ 0.77
ATP13A1-214ENST00000497556 LRRC9Q6ZRR7 1453 aa19.88■□□□□ 0.77
ATP13A1-214ENST00000497556 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
ATP13A1-214ENST00000497556 DISP1Q96F81 1524 aa19.86■□□□□ 0.77
ATP13A1-214ENST00000497556 CHD1O14646 1710 aa19.85■□□□□ 0.77
ATP13A1-214ENST00000497556 FKBP8Q14318 412 aa19.81■□□□□ 0.76
ATP13A1-214ENST00000497556 MSH5O43196 834 aa19.81■□□□□ 0.76
ATP13A1-214ENST00000497556 HECW1Q76N89 1606 aa19.79■□□□□ 0.76
ATP13A1-214ENST00000497556 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
ATP13A1-214ENST00000497556 ERICH6Q7L0X2 663 aa19.74■□□□□ 0.75
ATP13A1-214ENST00000497556 CCDC18Q5T9S5 1454 aa19.73■□□□□ 0.75
ATP13A1-214ENST00000497556 JPH4Q96JJ6 628 aa19.73■□□□□ 0.75
ATP13A1-214ENST00000497556 KCNH8Q96L42 1107 aa19.73■□□□□ 0.75
ATP13A1-214ENST00000497556 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
ATP13A1-214ENST00000497556 CCNB3Q8WWL7 1395 aa19.72■□□□□ 0.75
ATP13A1-214ENST00000497556 CARMIL2Q6F5E8 1435 aa19.71■□□□□ 0.75
ATP13A1-214ENST00000497556 MTUS2Q5JR59 1369 aa19.71■□□□□ 0.75
ATP13A1-214ENST00000497556 EPRSP07814 1512 aaKnown RBP19.7■□□□□ 0.74
ATP13A1-214ENST00000497556 RAPGEF6Q8TEU7 1601 aa19.7■□□□□ 0.74
ATP13A1-214ENST00000497556 ITGAEP38570 1179 aa19.69■□□□□ 0.74
ATP13A1-214ENST00000497556 CDK13Q14004 1512 aaKnown RBP19.68■□□□□ 0.74
ATP13A1-214ENST00000497556 EHBP1L1Q8N3D4 1523 aa19.68■□□□□ 0.74
ATP13A1-214ENST00000497556 MAGI3Q5TCQ9 1506 aa19.67■□□□□ 0.74
ATP13A1-214ENST00000497556 FANCIQ9NVI1 1328 aa19.67■□□□□ 0.74
ATP13A1-214ENST00000497556 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
ATP13A1-214ENST00000497556 NUP153P49790 1475 aaKnown RBP19.64■□□□□ 0.74
ATP13A1-214ENST00000497556 NEFLP07196 543 aa19.64■□□□□ 0.73
ATP13A1-214ENST00000497556 ARID3CA6NKF2 412 aa19.63■□□□□ 0.73
ATP13A1-214ENST00000497556 SHROOM2Q13796 1616 aa19.62■□□□□ 0.73
ATP13A1-214ENST00000497556 MYT1LQ9UL68 1186 aa19.62■□□□□ 0.73
ATP13A1-214ENST00000497556 PLB1Q6P1J6 1458 aa19.62■□□□□ 0.73
ATP13A1-214ENST00000497556 PRG4Q92954 1404 aaPredicted RBP19.62■□□□□ 0.73
ATP13A1-214ENST00000497556 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
ATP13A1-214ENST00000497556 ARHGEF11O15085 1522 aa19.57■□□□□ 0.72
ATP13A1-214ENST00000497556 FGD6Q6ZV73 1430 aa19.56■□□□□ 0.72
ATP13A1-214ENST00000497556 ABCA8O94911 1581 aa19.56■□□□□ 0.72
ATP13A1-214ENST00000497556 CLASP1Q7Z460 1538 aa19.56■□□□□ 0.72
ATP13A1-214ENST00000497556 FAM50AQ14320 339 aaKnown RBP19.55■□□□□ 0.72
ATP13A1-214ENST00000497556 MYOM3Q5VTT5 1437 aa19.54■□□□□ 0.72
ATP13A1-214ENST00000497556 MAPKBP1O60336 1514 aa19.53■□□□□ 0.72
ATP13A1-214ENST00000497556 DEKP35659 375 aaKnown RBP19.52■□□□□ 0.71
ATP13A1-214ENST00000497556 ERCC6L2Q5T890 1561 aa19.51■□□□□ 0.71
ATP13A1-214ENST00000497556 RAB3GAP2Q9H2M9 1393 aa19.51■□□□□ 0.71
ATP13A1-214ENST00000497556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.5■□□□□ 0.71
ATP13A1-214ENST00000497556 PTPRGP23470 1445 aa19.5■□□□□ 0.71
ATP13A1-214ENST00000497556 PTPN23Q9H3S7 1636 aa19.47■□□□□ 0.71
ATP13A1-214ENST00000497556 CDK11AQ9UQ88 783 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms