RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 NISCHQ9Y2I1 1504 aa29.25■■■□□ 2.27
ATP13A1-214ENST00000497556 CCDC180Q9P1Z9 1646 aa25.46■■□□□ 1.67
ATP13A1-214ENST00000497556 ZCCHC6Q5VYS8 1495 aaKnown RBP24.61■■□□□ 1.53
ATP13A1-214ENST00000497556 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
ATP13A1-214ENST00000497556 DCAF1Q9Y4B6 1507 aa24.14■■□□□ 1.46
ATP13A1-214ENST00000497556 SHROOM4Q9ULL8 1493 aa24.03■■□□□ 1.44
ATP13A1-214ENST00000497556 ABCC9O60706 1549 aa24.01■■□□□ 1.43
ATP13A1-214ENST00000497556 MYO15BQ96JP2 1530 aa23.79■■□□□ 1.4
ATP13A1-214ENST00000497556 NACADO15069 1562 aa23.66■■□□□ 1.38
ATP13A1-214ENST00000497556 HRCP23327 699 aa23.51■■□□□ 1.35
ATP13A1-214ENST00000497556 SCRIBQ14160 1630 aa23.49■■□□□ 1.35
ATP13A1-214ENST00000497556 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
ATP13A1-214ENST00000497556 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
ATP13A1-214ENST00000497556 PELP1Q8IZL8 1130 aaKnown RBP23.14■■□□□ 1.3
ATP13A1-214ENST00000497556 UNC13AQ9UPW8 1703 aa23.08■■□□□ 1.29
ATP13A1-214ENST00000497556 PPARGC1BQ86YN6 1023 aaKnown RBP22.91■■□□□ 1.26
ATP13A1-214ENST00000497556 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
ATP13A1-214ENST00000497556 BICRAQ9NZM4 1560 aa22.77■■□□□ 1.24
ATP13A1-214ENST00000497556 CECR2Q9BXF3 1484 aa22.76■■□□□ 1.23
ATP13A1-214ENST00000497556 RSF1Q96T23 1441 aaPredicted RBP22.75■■□□□ 1.23
ATP13A1-214ENST00000497556 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
ATP13A1-214ENST00000497556 PABPN1Q86U42 306 aaKnown RBP eCLIP22.66■■□□□ 1.223e-7■■□□□ 13.3
ATP13A1-214ENST00000497556 MROH2BQ7Z745 1585 aa22.64■■□□□ 1.21
ATP13A1-214ENST00000497556 BAZ1AQ9NRL2 1556 aaPredicted RBP22.58■■□□□ 1.21
ATP13A1-214ENST00000497556 WIZO95785 1651 aa22.5■■□□□ 1.19
ATP13A1-214ENST00000497556 SMARCA4P51532 1647 aa22.5■■□□□ 1.19
ATP13A1-214ENST00000497556 SCAF1Q9H7N4 1312 aaKnown RBP22.37■■□□□ 1.17
ATP13A1-214ENST00000497556 MYT1Q01538 1121 aa22.35■■□□□ 1.17
ATP13A1-214ENST00000497556 LOC105371045A0A1W2PR82 267 aa22.24■■□□□ 1.15
ATP13A1-214ENST00000497556 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
ATP13A1-214ENST00000497556 PEG3Q9GZU2 1588 aa22.18■■□□□ 1.14
ATP13A1-214ENST00000497556 EIF4G1Q04637 1599 aaKnown RBP22.07■■□□□ 1.12
ATP13A1-214ENST00000497556 ATAD2BQ9ULI0 1458 aa22.06■■□□□ 1.12
ATP13A1-214ENST00000497556 TRIM26Q12899 539 aaPredicted RBP22.06■■□□□ 1.12
ATP13A1-214ENST00000497556 SMARCA2P51531 1590 aa22.05■■□□□ 1.12
ATP13A1-214ENST00000497556 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
ATP13A1-214ENST00000497556 CCDC88BA6NC98 1476 aa21.98■■□□□ 1.11
ATP13A1-214ENST00000497556 BAZ1BQ9UIG0 1483 aaKnown RBP21.96■■□□□ 1.11
ATP13A1-214ENST00000497556 HMGXB3Q12766 1538 aa21.83■■□□□ 1.09
ATP13A1-214ENST00000497556 NCAPD3P42695 1498 aa21.82■■□□□ 1.08
ATP13A1-214ENST00000497556 ACIN1Q9UKV3 1341 aaKnown RBP21.75■■□□□ 1.07
ATP13A1-214ENST00000497556 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
ATP13A1-214ENST00000497556 TRIM41Q8WV44 630 aa21.71■■□□□ 1.07
ATP13A1-214ENST00000497556 NEUROD1Q13562 356 aa21.64■■□□□ 1.05
ATP13A1-214ENST00000497556 ABCC8Q09428 1581 aa21.62■■□□□ 1.05
ATP13A1-214ENST00000497556 FAM9AQ8IZU1 332 aaPredicted RBP21.57■■□□□ 1.04
ATP13A1-214ENST00000497556 EHMT2Q96KQ7 1210 aa21.55■■□□□ 1.04
ATP13A1-214ENST00000497556 GTF3C3Q9Y5Q9 886 aa21.54■■□□□ 1.04
ATP13A1-214ENST00000497556 CENPBP07199 599 aaPredicted RBP21.41■■□□□ 1.02
ATP13A1-214ENST00000497556 WRNQ14191 1432 aaPredicted RBP eCLIP21.41■■□□□ 1.02
ATP13A1-214ENST00000497556 CFTRP13569 1480 aa21.39■■□□□ 1.02
ATP13A1-214ENST00000497556 PRDM2Q13029 1718 aa21.37■■□□□ 1.01
ATP13A1-214ENST00000497556 SYNJ1O43426 1573 aa21.36■■□□□ 1.01
ATP13A1-214ENST00000497556 CADPSQ9ULU8 1353 aa21.28■■□□□ 1
ATP13A1-214ENST00000497556 TOP2BQ02880 1626 aa21.23■□□□□ 0.99
ATP13A1-214ENST00000497556 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
ATP13A1-214ENST00000497556 SOGA1O94964 1423 aa21.21■□□□□ 0.99
ATP13A1-214ENST00000497556 DIEXFQ68CQ4 756 aaKnown RBP21.19■□□□□ 0.98
ATP13A1-214ENST00000497556 CUX1P39880 1505 aa21.16■□□□□ 0.98
ATP13A1-214ENST00000497556 DNAJC5BQ9UF47 199 aa21.16■□□□□ 0.98
ATP13A1-214ENST00000497556 RUSC2Q8N2Y8 1516 aa21.14■□□□□ 0.97
ATP13A1-214ENST00000497556 NESP48681 1621 aa21.13■□□□□ 0.97
ATP13A1-214ENST00000497556 EEA1Q15075 1411 aa21.12■□□□□ 0.97
ATP13A1-214ENST00000497556 LAMC3Q9Y6N6 1575 aa21.09■□□□□ 0.97
ATP13A1-214ENST00000497556 FANCD2Q9BXW9 1451 aa21.08■□□□□ 0.96
ATP13A1-214ENST00000497556 TTBK1Q5TCY1 1321 aaPredicted RBP21.08■□□□□ 0.96
ATP13A1-214ENST00000497556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.07■□□□□ 0.96
ATP13A1-214ENST00000497556 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
ATP13A1-214ENST00000497556 CCER1Q8TC90 406 aaPredicted RBP20.99■□□□□ 0.95
ATP13A1-214ENST00000497556 CEP164Q9UPV0 1460 aa20.93■□□□□ 0.94
ATP13A1-214ENST00000497556 DNMBPQ6XZF7 1577 aa20.92■□□□□ 0.94
ATP13A1-214ENST00000497556 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
ATP13A1-214ENST00000497556 KIF21AQ7Z4S6 1674 aa20.9■□□□□ 0.94
ATP13A1-214ENST00000497556 PDS5BQ9NTI5 1447 aa20.9■□□□□ 0.94
ATP13A1-214ENST00000497556 KIF21BO75037 1637 aa20.89■□□□□ 0.94
ATP13A1-214ENST00000497556 GOLGA3Q08378 1498 aa20.88■□□□□ 0.93
ATP13A1-214ENST00000497556 TOPBP1Q92547 1522 aa20.87■□□□□ 0.93
ATP13A1-214ENST00000497556 KIF27Q86VH2 1401 aa20.84■□□□□ 0.93
ATP13A1-214ENST00000497556 URB2Q14146 1524 aaKnown RBP20.82■□□□□ 0.92
ATP13A1-214ENST00000497556 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
ATP13A1-214ENST00000497556 BCL11AQ9H165 835 aa20.8■□□□□ 0.92
ATP13A1-214ENST00000497556 YTHDC1Q96MU7 727 aaKnown RBP20.79■□□□□ 0.92
ATP13A1-214ENST00000497556 CUX2O14529 1486 aa20.79■□□□□ 0.92
ATP13A1-214ENST00000497556 UBTFP17480 764 aaKnown RBP20.78■□□□□ 0.92
ATP13A1-214ENST00000497556 POLA1P09884 1462 aaPredicted RBP20.78■□□□□ 0.92
ATP13A1-214ENST00000497556 RAPGEF2Q9Y4G8 1499 aa20.77■□□□□ 0.92
ATP13A1-214ENST00000497556 CEP162Q5TB80 1403 aa20.75■□□□□ 0.91
ATP13A1-214ENST00000497556 PRXQ9BXM0 1461 aa20.73■□□□□ 0.91
ATP13A1-214ENST00000497556 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
ATP13A1-214ENST00000497556 ZNF316A6NFI3 1004 aaPredicted RBP20.73■□□□□ 0.91
ATP13A1-214ENST00000497556 ERICH3Q5RHP9 1530 aa20.72■□□□□ 0.91
ATP13A1-214ENST00000497556 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
ATP13A1-214ENST00000497556 WDR97A6NE52 1622 aa20.68■□□□□ 0.9
ATP13A1-214ENST00000497556 ANP32EQ9BTT0 268 aa20.66■□□□□ 0.9
ATP13A1-214ENST00000497556 MRC2Q9UBG0 1479 aa20.65■□□□□ 0.9
ATP13A1-214ENST00000497556 IGF1RP08069 1367 aa20.63■□□□□ 0.89
ATP13A1-214ENST00000497556 MIER1Q8N108 512 aa20.61■□□□□ 0.89
ATP13A1-214ENST00000497556 TARBP1Q13395 1621 aaKnown RBP20.56■□□□□ 0.88
ATP13A1-214ENST00000497556 ERCC6Q03468 1493 aa20.56■□□□□ 0.88
ATP13A1-214ENST00000497556 CLIP1P30622 1438 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms