RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 SNAPC4Q5SXM2 1469 aa18.53■□□□□ 0.56
TNRC6A-206ENST00000477487 TRIM26Q12899 539 aaPredicted RBP18.52■□□□□ 0.56
TNRC6A-206ENST00000477487 VPS8Q8N3P4 1428 aa18.52■□□□□ 0.56
TNRC6A-206ENST00000477487 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
TNRC6A-206ENST00000477487 FBLN2P98095 1184 aa18.48■□□□□ 0.55
TNRC6A-206ENST00000477487 FHAD1B1AJZ9 1412 aa18.47■□□□□ 0.55
TNRC6A-206ENST00000477487 CTTNBP2Q8WZ74 1663 aa18.47■□□□□ 0.55
TNRC6A-206ENST00000477487 FHOD3Q2V2M9 1422 aa18.45■□□□□ 0.54
TNRC6A-206ENST00000477487 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
TNRC6A-206ENST00000477487 CHMP7Q8WUX9 453 aaPredicted RBP18.37■□□□□ 0.53
TNRC6A-206ENST00000477487 ATP1B4Q9UN42 357 aaPredicted RBP18.37■□□□□ 0.53
TNRC6A-206ENST00000477487 GRIN2AQ12879 1464 aa18.36■□□□□ 0.53
TNRC6A-206ENST00000477487 APLP2Q06481 763 aa18.32■□□□□ 0.52
TNRC6A-206ENST00000477487 MAGI1Q96QZ7 1491 aaPredicted RBP18.32■□□□□ 0.52
TNRC6A-206ENST00000477487 CEP170Q5SW79 1584 aa18.31■□□□□ 0.52
TNRC6A-206ENST00000477487 SYNJ2O15056 1496 aa18.31■□□□□ 0.52
TNRC6A-206ENST00000477487 PCF11O94913 1555 aaKnown RBP18.3■□□□□ 0.52
TNRC6A-206ENST00000477487 IQGAP2Q13576 1575 aa18.3■□□□□ 0.52
TNRC6A-206ENST00000477487 PLPPR3Q6T4P5 718 aa18.29■□□□□ 0.52
TNRC6A-206ENST00000477487 SAMD9Q5K651 1589 aa18.28■□□□□ 0.52
TNRC6A-206ENST00000477487 ARID3CA6NKF2 412 aa18.27■□□□□ 0.52
TNRC6A-206ENST00000477487 EFCAB5A4FU69 1503 aa18.25■□□□□ 0.51
TNRC6A-206ENST00000477487 KIAA0586Q9BVV6 1533 aa18.23■□□□□ 0.51
TNRC6A-206ENST00000477487 CHD1O14646 1710 aa18.22■□□□□ 0.51
TNRC6A-206ENST00000477487 LRRIQ1Q96JM4 1722 aa18.2■□□□□ 0.5
TNRC6A-206ENST00000477487 DISP1Q96F81 1524 aa18.2■□□□□ 0.5
TNRC6A-206ENST00000477487 NUP160Q12769 1436 aa18.19■□□□□ 0.5
TNRC6A-206ENST00000477487 AEBP2Q6ZN18 517 aaPredicted RBP18.18■□□□□ 0.5
TNRC6A-206ENST00000477487 TIAM1Q13009 1591 aa18.18■□□□□ 0.5
TNRC6A-206ENST00000477487 UGGT2Q9NYU1 1516 aa18.17■□□□□ 0.5
TNRC6A-206ENST00000477487 HNRNPUL2Q1KMD3 747 aaKnown RBP18.16■□□□□ 0.5
TNRC6A-206ENST00000477487 JPH4Q96JJ6 628 aa18.16■□□□□ 0.5
TNRC6A-206ENST00000477487 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
TNRC6A-206ENST00000477487 KIAA0556O60303 1618 aa18.14■□□□□ 0.49
TNRC6A-206ENST00000477487 FMN1Q68DA7 1419 aa18.13■□□□□ 0.49
TNRC6A-206ENST00000477487 FYCO1Q9BQS8 1478 aa18.12■□□□□ 0.49
TNRC6A-206ENST00000477487 LRRC9Q6ZRR7 1453 aa18.11■□□□□ 0.49
TNRC6A-206ENST00000477487 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.09■□□□□ 0.49
TNRC6A-206ENST00000477487 HRCP23327 699 aa18.09■□□□□ 0.49
TNRC6A-206ENST00000477487 CFAP43Q8NDM7 1665 aa18.09■□□□□ 0.49
TNRC6A-206ENST00000477487 CDK13Q14004 1512 aaKnown RBP18.08■□□□□ 0.48
TNRC6A-206ENST00000477487 PHLDB1Q86UU1 1377 aa18.06■□□□□ 0.48
TNRC6A-206ENST00000477487 ERCC6L2Q5T890 1561 aa18.06■□□□□ 0.48
TNRC6A-206ENST00000477487 MAGI3Q5TCQ9 1506 aa18.05■□□□□ 0.48
TNRC6A-206ENST00000477487 PLB1Q6P1J6 1458 aa18.05■□□□□ 0.48
TNRC6A-206ENST00000477487 ITGAEP38570 1179 aa18.04■□□□□ 0.48
TNRC6A-206ENST00000477487 RTN4Q9NQC3 1192 aaKnown RBP18.03■□□□□ 0.48
TNRC6A-206ENST00000477487 PRG4Q92954 1404 aaPredicted RBP18.03■□□□□ 0.48
TNRC6A-206ENST00000477487 MAP3K1Q13233 1512 aa18.02■□□□□ 0.47
TNRC6A-206ENST00000477487 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
TNRC6A-206ENST00000477487 NUP153P49790 1475 aaKnown RBP17.99■□□□□ 0.47
TNRC6A-206ENST00000477487 MTUS2Q5JR59 1369 aa17.98■□□□□ 0.47
TNRC6A-206ENST00000477487 HECW1Q76N89 1606 aa17.96■□□□□ 0.47
TNRC6A-206ENST00000477487 RAPGEF6Q8TEU7 1601 aa17.95■□□□□ 0.46
TNRC6A-206ENST00000477487 CARMIL2Q6F5E8 1435 aa17.95■□□□□ 0.46
TNRC6A-206ENST00000477487 RRBP1Q9P2E9 1410 aaKnown RBP17.95■□□□□ 0.46
TNRC6A-206ENST00000477487 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
TNRC6A-206ENST00000477487 MYT1Q01538 1121 aa17.93■□□□□ 0.46
TNRC6A-206ENST00000477487 FAM50AQ14320 339 aaKnown RBP17.93■□□□□ 0.46
TNRC6A-206ENST00000477487 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
TNRC6A-206ENST00000477487 CLASP1Q7Z460 1538 aa17.91■□□□□ 0.46
TNRC6A-206ENST00000477487 SHROOM2Q13796 1616 aa17.9■□□□□ 0.46
TNRC6A-206ENST00000477487 NCOA2Q15596 1464 aa17.9■□□□□ 0.46
TNRC6A-206ENST00000477487 CCER1Q8TC90 406 aaPredicted RBP17.88■□□□□ 0.45
TNRC6A-206ENST00000477487 PTPRGP23470 1445 aa17.88■□□□□ 0.45
TNRC6A-206ENST00000477487 CCDC18Q5T9S5 1454 aa17.87■□□□□ 0.45
TNRC6A-206ENST00000477487 ABCA8O94911 1581 aa17.86■□□□□ 0.45
TNRC6A-206ENST00000477487 EHBP1L1Q8N3D4 1523 aa17.85■□□□□ 0.45
TNRC6A-206ENST00000477487 SUPT6HQ7KZ85 1726 aaKnown RBP17.83■□□□□ 0.45
TNRC6A-206ENST00000477487 ATP10BO94823 1461 aa17.82■□□□□ 0.44
TNRC6A-206ENST00000477487 FGD6Q6ZV73 1430 aa17.82■□□□□ 0.44
TNRC6A-206ENST00000477487 ARHGEF11O15085 1522 aa17.8■□□□□ 0.44
TNRC6A-206ENST00000477487 KIF14Q15058 1648 aa17.79■□□□□ 0.44
TNRC6A-206ENST00000477487 MYOM3Q5VTT5 1437 aa17.78■□□□□ 0.44
TNRC6A-206ENST00000477487 ZNF644Q9H582 1327 aaPredicted RBP17.78■□□□□ 0.44
TNRC6A-206ENST00000477487 PTPRKQ15262 1439 aa17.78■□□□□ 0.44
TNRC6A-206ENST00000477487 OSCARQ8IYS5 282 aa17.77■□□□□ 0.43
TNRC6A-206ENST00000477487 UACAQ9BZF9 1416 aa17.75■□□□□ 0.43
TNRC6A-206ENST00000477487 TROQ12816 1431 aaPredicted RBP17.73■□□□□ 0.43
TNRC6A-206ENST00000477487 PTPN23Q9H3S7 1636 aa17.72■□□□□ 0.43
TNRC6A-206ENST00000477487 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
TNRC6A-206ENST00000477487 PRKCSHP14314 528 aaPredicted RBP17.71■□□□□ 0.42
TNRC6A-206ENST00000477487 PLEKHD1A6NEE1 506 aa17.7■□□□□ 0.42
TNRC6A-206ENST00000477487 CDK11AQ9UQ88 783 aaPredicted RBP17.7■□□□□ 0.42
TNRC6A-206ENST00000477487 ZNF777Q9ULD5 760 aaPredicted RBP17.69■□□□□ 0.42
TNRC6A-206ENST00000477487 RAB3GAP2Q9H2M9 1393 aa17.68■□□□□ 0.42
TNRC6A-206ENST00000477487 DAXXQ9UER7 740 aaPredicted RBP17.68■□□□□ 0.42
TNRC6A-206ENST00000477487 KCNH8Q96L42 1107 aa17.67■□□□□ 0.42
TNRC6A-206ENST00000477487 ABCC2Q92887 1545 aa17.67■□□□□ 0.42
TNRC6A-206ENST00000477487 RRP7BPQ9NSQ0 103 aa17.64■□□□□ 0.42
TNRC6A-206ENST00000477487 GPATCH8Q9UKJ3 1502 aaKnown RBP17.64■□□□□ 0.41
TNRC6A-206ENST00000477487 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
TNRC6A-206ENST00000477487 ADCY10Q96PN6 1610 aa17.63■□□□□ 0.41
TNRC6A-206ENST00000477487 ZCCHC11Q5TAX3 1644 aaKnown RBP17.62■□□□□ 0.41
TNRC6A-206ENST00000477487 CFDP1Q9UEE9 299 aaPredicted RBP17.62■□□□□ 0.41
TNRC6A-206ENST00000477487 ABCC10Q5T3U5 1492 aa17.61■□□□□ 0.41
TNRC6A-206ENST00000477487 TCOF1Q13428 1488 aaKnown RBP17.61■□□□□ 0.41
TNRC6A-206ENST00000477487 SETD5Q9C0A6 1442 aa17.61■□□□□ 0.41
TNRC6A-206ENST00000477487 CDC42BPAQ5VT25 1732 aa17.6■□□□□ 0.41
TNRC6A-206ENST00000477487 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms