RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 NISCHQ9Y2I1 1504 aa26.71■■□□□ 1.87
TNRC6A-206ENST00000477487 CCDC180Q9P1Z9 1646 aa23.09■■□□□ 1.29
TNRC6A-206ENST00000477487 ZCCHC6Q5VYS8 1495 aaKnown RBP22.42■■□□□ 1.18
TNRC6A-206ENST00000477487 DCAF8L2P0C7V8 631 aa22.41■■□□□ 1.18
TNRC6A-206ENST00000477487 SHROOM4Q9ULL8 1493 aa22.22■■□□□ 1.15
TNRC6A-206ENST00000477487 ABCC9O60706 1549 aa22.22■■□□□ 1.15
TNRC6A-206ENST00000477487 DCAF1Q9Y4B6 1507 aa21.86■■□□□ 1.09
TNRC6A-206ENST00000477487 SCRIBQ14160 1630 aa21.58■■□□□ 1.04
TNRC6A-206ENST00000477487 MYO15BQ96JP2 1530 aa21.53■■□□□ 1.04
TNRC6A-206ENST00000477487 NACADO15069 1562 aa21.53■■□□□ 1.04
TNRC6A-206ENST00000477487 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
TNRC6A-206ENST00000477487 SUPT5HO00267 1087 aaKnown RBP21.33■■□□□ 1
TNRC6A-206ENST00000477487 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
TNRC6A-206ENST00000477487 PABPN1Q86U42 306 aaKnown RBP eCLIP21.07■□□□□ 0.96
TNRC6A-206ENST00000477487 CECR2Q9BXF3 1484 aa20.97■□□□□ 0.95
TNRC6A-206ENST00000477487 BICRAQ9NZM4 1560 aa20.92■□□□□ 0.94
TNRC6A-206ENST00000477487 RSF1Q96T23 1441 aaPredicted RBP20.81■□□□□ 0.92
TNRC6A-206ENST00000477487 MROH2BQ7Z745 1585 aa20.78■□□□□ 0.92
TNRC6A-206ENST00000477487 WIZO95785 1651 aa20.64■□□□□ 0.89
TNRC6A-206ENST00000477487 BAZ1AQ9NRL2 1556 aaPredicted RBP20.54■□□□□ 0.88
TNRC6A-206ENST00000477487 SMARCA4P51532 1647 aa20.54■□□□□ 0.88
TNRC6A-206ENST00000477487 CHIC1Q5VXU3 224 aa20.3■□□□□ 0.84
TNRC6A-206ENST00000477487 EIF4G1Q04637 1599 aaKnown RBP20.24■□□□□ 0.83
TNRC6A-206ENST00000477487 TOP2AP11388 1531 aaKnown RBP20.22■□□□□ 0.83
TNRC6A-206ENST00000477487 ATAD2BQ9ULI0 1458 aa20.21■□□□□ 0.83
TNRC6A-206ENST00000477487 CCDC88BA6NC98 1476 aa20.15■□□□□ 0.82
TNRC6A-206ENST00000477487 PEG3Q9GZU2 1588 aa20.15■□□□□ 0.82
TNRC6A-206ENST00000477487 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
TNRC6A-206ENST00000477487 BAZ1BQ9UIG0 1483 aaKnown RBP20.08■□□□□ 0.81
TNRC6A-206ENST00000477487 CC2D2AQ9P2K1 1620 aa19.99■□□□□ 0.79
TNRC6A-206ENST00000477487 NCAPD3P42695 1498 aa19.94■□□□□ 0.78
TNRC6A-206ENST00000477487 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
TNRC6A-206ENST00000477487 ABCC8Q09428 1581 aa19.87■□□□□ 0.77
TNRC6A-206ENST00000477487 TRIM41Q8WV44 630 aa19.86■□□□□ 0.77
TNRC6A-206ENST00000477487 HMGXB3Q12766 1538 aa19.86■□□□□ 0.77
TNRC6A-206ENST00000477487 FAM9AQ8IZU1 332 aaPredicted RBP19.76■□□□□ 0.75
TNRC6A-206ENST00000477487 SLC24A1O60721 1099 aa19.76■□□□□ 0.75
TNRC6A-206ENST00000477487 LOC105371045A0A1W2PR82 267 aa19.73■□□□□ 0.75
TNRC6A-206ENST00000477487 EHMT2Q96KQ7 1210 aa19.68■□□□□ 0.74
TNRC6A-206ENST00000477487 NESP48681 1621 aa19.56■□□□□ 0.72
TNRC6A-206ENST00000477487 SYNJ1O43426 1573 aa19.56■□□□□ 0.72
TNRC6A-206ENST00000477487 CFTRP13569 1480 aa19.55■□□□□ 0.72
TNRC6A-206ENST00000477487 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
TNRC6A-206ENST00000477487 CADPSQ9ULU8 1353 aa19.5■□□□□ 0.71
TNRC6A-206ENST00000477487 RUSC2Q8N2Y8 1516 aa19.49■□□□□ 0.71
TNRC6A-206ENST00000477487 SOGA1O94964 1423 aa19.48■□□□□ 0.71
TNRC6A-206ENST00000477487 CUX1P39880 1505 aa19.39■□□□□ 0.69
TNRC6A-206ENST00000477487 PRDM2Q13029 1718 aa19.36■□□□□ 0.69
TNRC6A-206ENST00000477487 TOP2BQ02880 1626 aa19.33■□□□□ 0.68
TNRC6A-206ENST00000477487 FANCD2Q9BXW9 1451 aa19.32■□□□□ 0.68
TNRC6A-206ENST00000477487 BIVM-ERCC5R4GMW8 1640 aa19.28■□□□□ 0.68
TNRC6A-206ENST00000477487 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
TNRC6A-206ENST00000477487 CSRNP3Q8WYN3 585 aa19.2■□□□□ 0.66
TNRC6A-206ENST00000477487 KIF21AQ7Z4S6 1674 aa19.2■□□□□ 0.66
TNRC6A-206ENST00000477487 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
TNRC6A-206ENST00000477487 CEP164Q9UPV0 1460 aa19.15■□□□□ 0.66
TNRC6A-206ENST00000477487 URB2Q14146 1524 aaKnown RBP19.14■□□□□ 0.65
TNRC6A-206ENST00000477487 TOPBP1Q92547 1522 aa19.12■□□□□ 0.65
TNRC6A-206ENST00000477487 RAD54L2Q9Y4B4 1467 aa19.11■□□□□ 0.65
TNRC6A-206ENST00000477487 PDS5BQ9NTI5 1447 aa19.09■□□□□ 0.65
TNRC6A-206ENST00000477487 DNMBPQ6XZF7 1577 aa19.07■□□□□ 0.64
TNRC6A-206ENST00000477487 EEA1Q15075 1411 aa19.06■□□□□ 0.64
TNRC6A-206ENST00000477487 POLA1P09884 1462 aaPredicted RBP19.05■□□□□ 0.64
TNRC6A-206ENST00000477487 UBTFP17480 764 aaKnown RBP19.05■□□□□ 0.64
TNRC6A-206ENST00000477487 CUX2O14529 1486 aa19.05■□□□□ 0.64
TNRC6A-206ENST00000477487 RAPGEF2Q9Y4G8 1499 aa19.03■□□□□ 0.64
TNRC6A-206ENST00000477487 RANGAP1P46060 587 aaPredicted RBP19.02■□□□□ 0.63
TNRC6A-206ENST00000477487 KIF27Q86VH2 1401 aa18.98■□□□□ 0.63
TNRC6A-206ENST00000477487 GOLGA3Q08378 1498 aa18.96■□□□□ 0.63
TNRC6A-206ENST00000477487 PPARGC1BQ86YN6 1023 aaKnown RBP18.94■□□□□ 0.62
TNRC6A-206ENST00000477487 TDRD9Q8NDG6 1382 aaKnown RBP18.93■□□□□ 0.62
TNRC6A-206ENST00000477487 KIF21BO75037 1637 aa18.93■□□□□ 0.62
TNRC6A-206ENST00000477487 IGF1RP08069 1367 aa18.92■□□□□ 0.62
TNRC6A-206ENST00000477487 CEP162Q5TB80 1403 aa18.91■□□□□ 0.62
TNRC6A-206ENST00000477487 ERCC6Q03468 1493 aa18.91■□□□□ 0.62
TNRC6A-206ENST00000477487 TNIKQ9UKE5 1360 aa18.9■□□□□ 0.62
TNRC6A-206ENST00000477487 PRXQ9BXM0 1461 aa18.9■□□□□ 0.62
TNRC6A-206ENST00000477487 MRC2Q9UBG0 1479 aa18.9■□□□□ 0.62
TNRC6A-206ENST00000477487 ABCA10Q8WWZ4 1543 aa18.87■□□□□ 0.61
TNRC6A-206ENST00000477487 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
TNRC6A-206ENST00000477487 TARBP1Q13395 1621 aaKnown RBP18.82■□□□□ 0.6
TNRC6A-206ENST00000477487 CARMIL1Q5VZK9 1371 aa18.8■□□□□ 0.6
TNRC6A-206ENST00000477487 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.63e-7■■■■□ 21.2
TNRC6A-206ENST00000477487 THOC2Q8NI27 1593 aaKnown RBP18.79■□□□□ 0.6
TNRC6A-206ENST00000477487 ZNF608Q9ULD9 1512 aaPredicted RBP18.78■□□□□ 0.6
TNRC6A-206ENST00000477487 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
TNRC6A-206ENST00000477487 WDR62O43379 1518 aa18.78■□□□□ 0.6
TNRC6A-206ENST00000477487 PCGF6Q9BYE7 350 aa18.76■□□□□ 0.59
TNRC6A-206ENST00000477487 ERICH3Q5RHP9 1530 aa18.76■□□□□ 0.59
TNRC6A-206ENST00000477487 ABCA5Q8WWZ7 1642 aa18.75■□□□□ 0.59
TNRC6A-206ENST00000477487 GAPVD1Q14C86 1478 aa18.75■□□□□ 0.59
TNRC6A-206ENST00000477487 CLIP1P30622 1438 aa18.73■□□□□ 0.59
TNRC6A-206ENST00000477487 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
TNRC6A-206ENST00000477487 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
TNRC6A-206ENST00000477487 P3H3Q8IVL6 736 aa18.62■□□□□ 0.57
TNRC6A-206ENST00000477487 ARAP1Q96P48 1450 aa18.6■□□□□ 0.57
TNRC6A-206ENST00000477487 CUL7Q14999 1698 aa18.59■□□□□ 0.57
TNRC6A-206ENST00000477487 EIF4G3O43432 1585 aaKnown RBP18.59■□□□□ 0.57
TNRC6A-206ENST00000477487 ARHGAP35Q9NRY4 1499 aa18.57■□□□□ 0.56
TNRC6A-206ENST00000477487 GRIN2BQ13224 1484 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 187.3 ms