RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 EFCAB5A4FU69 1503 aa21.21■□□□□ 0.99
CCNL1-212ENST00000470121 MAP3K1Q13233 1512 aa21.19■□□□□ 0.98
CCNL1-212ENST00000470121 ERCC6Q03468 1493 aa21.18■□□□□ 0.98
CCNL1-212ENST00000470121 FHAD1B1AJZ9 1412 aa21.17■□□□□ 0.98
CCNL1-212ENST00000470121 THOC2Q8NI27 1593 aaKnown RBP21.17■□□□□ 0.98
CCNL1-212ENST00000470121 GRIN2BQ13224 1484 aa21.17■□□□□ 0.98
CCNL1-212ENST00000470121 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
CCNL1-212ENST00000470121 ZNF608Q9ULD9 1512 aaPredicted RBP21.15■□□□□ 0.98
CCNL1-212ENST00000470121 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
CCNL1-212ENST00000470121 FHOD3Q2V2M9 1422 aa21.13■□□□□ 0.97
CCNL1-212ENST00000470121 P3H3Q8IVL6 736 aa21.13■□□□□ 0.97
CCNL1-212ENST00000470121 TIAM1Q13009 1591 aa21.12■□□□□ 0.97
CCNL1-212ENST00000470121 SAMD9Q5K651 1589 aa21.11■□□□□ 0.97
CCNL1-212ENST00000470121 PCF11O94913 1555 aaKnown RBP21.08■□□□□ 0.97
CCNL1-212ENST00000470121 CCER1Q8TC90 406 aaPredicted RBP21.07■□□□□ 0.96
CCNL1-212ENST00000470121 CASKIN1Q8WXD9 1431 aa21.07■□□□□ 0.96
CCNL1-212ENST00000470121 RRBP1Q9P2E9 1410 aaKnown RBP21.07■□□□□ 0.96
CCNL1-212ENST00000470121 FYCO1Q9BQS8 1478 aa21.05■□□□□ 0.96
CCNL1-212ENST00000470121 HNRNPUL2Q1KMD3 747 aaKnown RBP21.05■□□□□ 0.96
CCNL1-212ENST00000470121 LRRC9Q6ZRR7 1453 aa21.04■□□□□ 0.96
CCNL1-212ENST00000470121 FMN1Q68DA7 1419 aa21.03■□□□□ 0.96
CCNL1-212ENST00000470121 CFAP43Q8NDM7 1665 aa21.03■□□□□ 0.96
CCNL1-212ENST00000470121 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
CCNL1-212ENST00000470121 SNAPC4Q5SXM2 1469 aa21■□□□□ 0.95
CCNL1-212ENST00000470121 IQGAP2Q13576 1575 aa20.98■□□□□ 0.95
CCNL1-212ENST00000470121 CCNB3Q8WWL7 1395 aa20.95■□□□□ 0.94
CCNL1-212ENST00000470121 MAGI1Q96QZ7 1491 aaPredicted RBP20.93■□□□□ 0.94
CCNL1-212ENST00000470121 UGGT2Q9NYU1 1516 aa20.92■□□□□ 0.94
CCNL1-212ENST00000470121 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
CCNL1-212ENST00000470121 KIAA0586Q9BVV6 1533 aa20.91■□□□□ 0.94
CCNL1-212ENST00000470121 ATP1B4Q9UN42 357 aaPredicted RBP20.9■□□□□ 0.94
CCNL1-212ENST00000470121 PHLDB1Q86UU1 1377 aa20.89■□□□□ 0.93
CCNL1-212ENST00000470121 LRRIQ1Q96JM4 1722 aa20.87■□□□□ 0.93
CCNL1-212ENST00000470121 SYNJ2O15056 1496 aa20.86■□□□□ 0.93
CCNL1-212ENST00000470121 DISP1Q96F81 1524 aa20.81■□□□□ 0.92
CCNL1-212ENST00000470121 CHMP7Q8WUX9 453 aaPredicted RBP20.8■□□□□ 0.92
CCNL1-212ENST00000470121 CEP170Q5SW79 1584 aa20.79■□□□□ 0.92
CCNL1-212ENST00000470121 NUP160Q12769 1436 aa20.77■□□□□ 0.92
CCNL1-212ENST00000470121 KIAA0556O60303 1618 aa20.77■□□□□ 0.92
CCNL1-212ENST00000470121 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.76■□□□□ 0.912e-9■□□□□ 10.1
CCNL1-212ENST00000470121 CCDC18Q5T9S5 1454 aa20.76■□□□□ 0.91
CCNL1-212ENST00000470121 MTUS2Q5JR59 1369 aa20.75■□□□□ 0.91
CCNL1-212ENST00000470121 HECW1Q76N89 1606 aa20.75■□□□□ 0.91
CCNL1-212ENST00000470121 EHBP1L1Q8N3D4 1523 aa20.72■□□□□ 0.91
CCNL1-212ENST00000470121 DHX57Q6P158 1386 aaKnown RBP20.71■□□□□ 0.91
CCNL1-212ENST00000470121 EPRSP07814 1512 aaKnown RBP20.71■□□□□ 0.91
CCNL1-212ENST00000470121 MAGI3Q5TCQ9 1506 aa20.71■□□□□ 0.91
CCNL1-212ENST00000470121 NCOA2Q15596 1464 aa20.69■□□□□ 0.9
CCNL1-212ENST00000470121 CLSPNQ9HAW4 1339 aa20.69■□□□□ 0.9
CCNL1-212ENST00000470121 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
CCNL1-212ENST00000470121 ITGAEP38570 1179 aa20.69■□□□□ 0.9
CCNL1-212ENST00000470121 FBLN2P98095 1184 aa20.69■□□□□ 0.9
CCNL1-212ENST00000470121 FGD6Q6ZV73 1430 aa20.68■□□□□ 0.9
CCNL1-212ENST00000470121 SUPT6HQ7KZ85 1726 aaKnown RBP20.67■□□□□ 0.9
CCNL1-212ENST00000470121 FAM50AQ14320 339 aaKnown RBP20.67■□□□□ 0.9
CCNL1-212ENST00000470121 JPH4Q96JJ6 628 aa20.65■□□□□ 0.9
CCNL1-212ENST00000470121 CDK13Q14004 1512 aaKnown RBP20.63■□□□□ 0.89
CCNL1-212ENST00000470121 MYOM3Q5VTT5 1437 aa20.63■□□□□ 0.89
CCNL1-212ENST00000470121 SETD5Q9C0A6 1442 aa20.63■□□□□ 0.89
CCNL1-212ENST00000470121 RAB3GAP2Q9H2M9 1393 aa20.62■□□□□ 0.89
CCNL1-212ENST00000470121 RAPGEF6Q8TEU7 1601 aa20.61■□□□□ 0.89
CCNL1-212ENST00000470121 NUP153P49790 1475 aaKnown RBP20.61■□□□□ 0.89
CCNL1-212ENST00000470121 CARMIL2Q6F5E8 1435 aa20.59■□□□□ 0.89
CCNL1-212ENST00000470121 TCOF1Q13428 1488 aaKnown RBP20.53■□□□□ 0.88
CCNL1-212ENST00000470121 PTPRKQ15262 1439 aa20.53■□□□□ 0.88
CCNL1-212ENST00000470121 PTPN23Q9H3S7 1636 aa20.53■□□□□ 0.88
CCNL1-212ENST00000470121 PLB1Q6P1J6 1458 aa20.52■□□□□ 0.88
CCNL1-212ENST00000470121 ARID3CA6NKF2 412 aa20.51■□□□□ 0.87
CCNL1-212ENST00000470121 CHD1O14646 1710 aa20.5■□□□□ 0.87
CCNL1-212ENST00000470121 MIA2Q96PC5 1412 aa20.5■□□□□ 0.87
CCNL1-212ENST00000470121 ABCA8O94911 1581 aa20.47■□□□□ 0.87
CCNL1-212ENST00000470121 MAPKBP1O60336 1514 aa20.46■□□□□ 0.87
CCNL1-212ENST00000470121 CDK11AQ9UQ88 783 aaPredicted RBP20.46■□□□□ 0.87
CCNL1-212ENST00000470121 HFM1A2PYH4 1435 aa20.45■□□□□ 0.86
CCNL1-212ENST00000470121 PRG4Q92954 1404 aaPredicted RBP20.45■□□□□ 0.86
CCNL1-212ENST00000470121 TROQ12816 1431 aaPredicted RBP20.43■□□□□ 0.86
CCNL1-212ENST00000470121 ZNF316A6NFI3 1004 aaPredicted RBP20.43■□□□□ 0.86
CCNL1-212ENST00000470121 SHROOM2Q13796 1616 aa20.42■□□□□ 0.86
CCNL1-212ENST00000470121 NAIPQ13075 1403 aa20.4■□□□□ 0.86
CCNL1-212ENST00000470121 ADCY10Q96PN6 1610 aa20.38■□□□□ 0.85
CCNL1-212ENST00000470121 ATP10BO94823 1461 aa20.38■□□□□ 0.85
CCNL1-212ENST00000470121 PTPRGP23470 1445 aa20.37■□□□□ 0.85
CCNL1-212ENST00000470121 AKNAQ7Z591 1439 aa20.35■□□□□ 0.85
CCNL1-212ENST00000470121 DIEXFQ68CQ4 756 aaKnown RBP20.32■□□□□ 0.84
CCNL1-212ENST00000470121 UACAQ9BZF9 1416 aa20.32■□□□□ 0.84
CCNL1-212ENST00000470121 GPATCH8Q9UKJ3 1502 aaKnown RBP20.31■□□□□ 0.84
CCNL1-212ENST00000470121 KIF14Q15058 1648 aa20.31■□□□□ 0.84
CCNL1-212ENST00000470121 CLASP1Q7Z460 1538 aa20.3■□□□□ 0.84
CCNL1-212ENST00000470121 GCC2Q8IWJ2 1684 aa20.3■□□□□ 0.84
CCNL1-212ENST00000470121 PLEKHD1A6NEE1 506 aa20.29■□□□□ 0.84
CCNL1-212ENST00000470121 ABCC5O15440 1437 aa20.28■□□□□ 0.84
CCNL1-212ENST00000470121 DAPK1P53355 1430 aa20.28■□□□□ 0.84
CCNL1-212ENST00000470121 ZNF644Q9H582 1327 aaPredicted RBP20.28■□□□□ 0.84
CCNL1-212ENST00000470121 DNMT1P26358 1616 aaKnown RBP20.27■□□□□ 0.84
CCNL1-212ENST00000470121 CHIC2Q9UKJ5 165 aa20.27■□□□□ 0.84
CCNL1-212ENST00000470121 ITSN2Q9NZM3 1697 aa20.27■□□□□ 0.84
CCNL1-212ENST00000470121 ERCC6L2Q5T890 1561 aa20.27■□□□□ 0.84
CCNL1-212ENST00000470121 ABCC10Q5T3U5 1492 aa20.27■□□□□ 0.83
CCNL1-212ENST00000470121 ROCK1Q13464 1354 aa20.27■□□□□ 0.83
CCNL1-212ENST00000470121 RRP7BPQ9NSQ0 103 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms