RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 EFCAB5A4FU69 1503 aa27.18■■□□□ 1.94
CTSB-204ENST00000453527 ZEB1P37275 1124 aaPredicted RBP27.17■■□□□ 1.94
CTSB-204ENST00000453527 GRIN2BQ13224 1484 aa27.15■■□□□ 1.94
CTSB-204ENST00000453527 FHAD1B1AJZ9 1412 aa27.14■■□□□ 1.93
CTSB-204ENST00000453527 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
CTSB-204ENST00000453527 ADAMTS12P58397 1594 aa27.12■■□□□ 1.93
CTSB-204ENST00000453527 KANK4Q5T7N3 995 aaPredicted RBP27.11■■□□□ 1.93
CTSB-204ENST00000453527 MAP3K1Q13233 1512 aa27.08■■□□□ 1.93
CTSB-204ENST00000453527 P3H3Q8IVL6 736 aa27.07■■□□□ 1.92
CTSB-204ENST00000453527 FHOD3Q2V2M9 1422 aa27.05■■□□□ 1.92
CTSB-204ENST00000453527 SAMD9Q5K651 1589 aa27.03■■□□□ 1.92
CTSB-204ENST00000453527 EIF4G3O43432 1585 aaKnown RBP27.03■■□□□ 1.92
CTSB-204ENST00000453527 TIAM1Q13009 1591 aa27.03■■□□□ 1.92
CTSB-204ENST00000453527 PCF11O94913 1555 aaKnown RBP27.01■■□□□ 1.91
CTSB-204ENST00000453527 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.99■■□□□ 1.91
CTSB-204ENST00000453527 FYCO1Q9BQS8 1478 aa26.96■■□□□ 1.91
CTSB-204ENST00000453527 FMN1Q68DA7 1419 aa26.96■■□□□ 1.91
CTSB-204ENST00000453527 CASKIN1Q8WXD9 1431 aa26.95■■□□□ 1.9
CTSB-204ENST00000453527 CFAP43Q8NDM7 1665 aa26.94■■□□□ 1.9
CTSB-204ENST00000453527 SNAPC4Q5SXM2 1469 aa26.93■■□□□ 1.9
CTSB-204ENST00000453527 CCER1Q8TC90 406 aaPredicted RBP26.93■■□□□ 1.9
CTSB-204ENST00000453527 IQGAP2Q13576 1575 aa26.92■■□□□ 1.9
CTSB-204ENST00000453527 LRRC9Q6ZRR7 1453 aa26.9■■□□□ 1.9
CTSB-204ENST00000453527 HNRNPUL2Q1KMD3 747 aaKnown RBP26.9■■□□□ 1.9
CTSB-204ENST00000453527 RRBP1Q9P2E9 1410 aaKnown RBP26.89■■□□□ 1.9
CTSB-204ENST00000453527 MAGI1Q96QZ7 1491 aaPredicted RBP26.87■■□□□ 1.89
CTSB-204ENST00000453527 GRIN2AQ12879 1464 aa26.84■■□□□ 1.89
CTSB-204ENST00000453527 ATP1B4Q9UN42 357 aaPredicted RBP26.83■■□□□ 1.89
CTSB-204ENST00000453527 KIAA0586Q9BVV6 1533 aa26.79■■□□□ 1.88
CTSB-204ENST00000453527 UGGT2Q9NYU1 1516 aa26.79■■□□□ 1.88
CTSB-204ENST00000453527 SYNJ2O15056 1496 aa26.78■■□□□ 1.88
CTSB-204ENST00000453527 CCNB3Q8WWL7 1395 aa26.77■■□□□ 1.88
CTSB-204ENST00000453527 LRRIQ1Q96JM4 1722 aa26.74■■□□□ 1.87
CTSB-204ENST00000453527 CHMP7Q8WUX9 453 aaPredicted RBP26.72■■□□□ 1.87
CTSB-204ENST00000453527 PHLDB1Q86UU1 1377 aa26.69■■□□□ 1.86
CTSB-204ENST00000453527 CEP170Q5SW79 1584 aa26.66■■□□□ 1.86
CTSB-204ENST00000453527 DISP1Q96F81 1524 aa26.64■■□□□ 1.86
CTSB-204ENST00000453527 KIAA0556O60303 1618 aa26.64■■□□□ 1.85
CTSB-204ENST00000453527 HECW1Q76N89 1606 aa26.62■■□□□ 1.85
CTSB-204ENST00000453527 FBLN2P98095 1184 aa26.61■■□□□ 1.85
CTSB-204ENST00000453527 NUP160Q12769 1436 aa26.61■■□□□ 1.85
CTSB-204ENST00000453527 CCDC18Q5T9S5 1454 aa26.6■■□□□ 1.85
CTSB-204ENST00000453527 MTUS2Q5JR59 1369 aa26.6■■□□□ 1.85
CTSB-204ENST00000453527 EHBP1L1Q8N3D4 1523 aa26.54■■□□□ 1.84
CTSB-204ENST00000453527 EPRSP07814 1512 aaKnown RBP26.53■■□□□ 1.84
CTSB-204ENST00000453527 SUPT6HQ7KZ85 1726 aaKnown RBP26.51■■□□□ 1.83
CTSB-204ENST00000453527 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.51■■□□□ 1.832e-6■■□□□ 11.9
CTSB-204ENST00000453527 ITGAEP38570 1179 aa26.5■■□□□ 1.83
CTSB-204ENST00000453527 MAGI3Q5TCQ9 1506 aa26.48■■□□□ 1.83
CTSB-204ENST00000453527 NCOA2Q15596 1464 aa26.48■■□□□ 1.83
CTSB-204ENST00000453527 FAM50AQ14320 339 aaKnown RBP26.48■■□□□ 1.83
CTSB-204ENST00000453527 JPH4Q96JJ6 628 aa26.47■■□□□ 1.83
CTSB-204ENST00000453527 FGD6Q6ZV73 1430 aa26.46■■□□□ 1.83
CTSB-204ENST00000453527 RAPGEF6Q8TEU7 1601 aa26.44■■□□□ 1.82
CTSB-204ENST00000453527 CARMIL2Q6F5E8 1435 aa26.44■■□□□ 1.82
CTSB-204ENST00000453527 ARHGEF11O15085 1522 aa26.43■■□□□ 1.82
CTSB-204ENST00000453527 CDK13Q14004 1512 aaKnown RBP26.43■■□□□ 1.82
CTSB-204ENST00000453527 DHX57Q6P158 1386 aaKnown RBP26.41■■□□□ 1.82
CTSB-204ENST00000453527 MYOM3Q5VTT5 1437 aa26.41■■□□□ 1.82
CTSB-204ENST00000453527 NUP153P49790 1475 aaKnown RBP26.4■■□□□ 1.82
CTSB-204ENST00000453527 CLSPNQ9HAW4 1339 aa26.39■■□□□ 1.82
CTSB-204ENST00000453527 CHD1O14646 1710 aa26.39■■□□□ 1.81
CTSB-204ENST00000453527 SETD5Q9C0A6 1442 aa26.35■■□□□ 1.81
CTSB-204ENST00000453527 RAB3GAP2Q9H2M9 1393 aa26.34■■□□□ 1.81
CTSB-204ENST00000453527 ARID3CA6NKF2 412 aa26.32■■□□□ 1.8
CTSB-204ENST00000453527 PLB1Q6P1J6 1458 aa26.3■■□□□ 1.8
CTSB-204ENST00000453527 PTPN23Q9H3S7 1636 aa26.29■■□□□ 1.8
CTSB-204ENST00000453527 CDK11AQ9UQ88 783 aaPredicted RBP26.26■■□□□ 1.79
CTSB-204ENST00000453527 PRG4Q92954 1404 aaPredicted RBP26.24■■□□□ 1.79
CTSB-204ENST00000453527 TCOF1Q13428 1488 aaKnown RBP26.23■■□□□ 1.79
CTSB-204ENST00000453527 ABCA8O94911 1581 aa26.22■■□□□ 1.79
CTSB-204ENST00000453527 MIA2Q96PC5 1412 aa26.22■■□□□ 1.79
CTSB-204ENST00000453527 SHROOM2Q13796 1616 aa26.2■■□□□ 1.79
CTSB-204ENST00000453527 PTPRKQ15262 1439 aa26.2■■□□□ 1.78
CTSB-204ENST00000453527 TROQ12816 1431 aaPredicted RBP26.16■■□□□ 1.78
CTSB-204ENST00000453527 HFM1A2PYH4 1435 aa26.14■■□□□ 1.78
CTSB-204ENST00000453527 PTPRGP23470 1445 aa26.13■■□□□ 1.77
CTSB-204ENST00000453527 ADCY10Q96PN6 1610 aa26.11■■□□□ 1.77
CTSB-204ENST00000453527 MAPKBP1O60336 1514 aa26.11■■□□□ 1.77
CTSB-204ENST00000453527 ATP10BO94823 1461 aa26.09■■□□□ 1.77
CTSB-204ENST00000453527 NAIPQ13075 1403 aa26.07■■□□□ 1.76
CTSB-204ENST00000453527 CLASP1Q7Z460 1538 aa26.05■■□□□ 1.76
CTSB-204ENST00000453527 KIF14Q15058 1648 aa26.04■■□□□ 1.76
CTSB-204ENST00000453527 ITSN2Q9NZM3 1697 aa26.03■■□□□ 1.76
CTSB-204ENST00000453527 PLEKHD1A6NEE1 506 aa26.02■■□□□ 1.76
CTSB-204ENST00000453527 ZNF316A6NFI3 1004 aaPredicted RBP26.02■■□□□ 1.76
CTSB-204ENST00000453527 AKNAQ7Z591 1439 aa26■■□□□ 1.75
CTSB-204ENST00000453527 ERCC6L2Q5T890 1561 aa26■■□□□ 1.75
CTSB-204ENST00000453527 GPATCH8Q9UKJ3 1502 aaKnown RBP25.99■■□□□ 1.75
CTSB-204ENST00000453527 GCC2Q8IWJ2 1684 aa25.99■■□□□ 1.75
CTSB-204ENST00000453527 UACAQ9BZF9 1416 aa25.98■■□□□ 1.75
CTSB-204ENST00000453527 DNMT1P26358 1616 aaKnown RBP25.98■■□□□ 1.75
CTSB-204ENST00000453527 DAPK1P53355 1430 aa25.95■■□□□ 1.75
CTSB-204ENST00000453527 CHIC2Q9UKJ5 165 aa25.95■■□□□ 1.75
CTSB-204ENST00000453527 ZNF644Q9H582 1327 aaPredicted RBP25.95■■□□□ 1.74
CTSB-204ENST00000453527 CFDP1Q9UEE9 299 aaPredicted RBP25.94■■□□□ 1.74
CTSB-204ENST00000453527 RRP7BPQ9NSQ0 103 aa25.93■■□□□ 1.74
CTSB-204ENST00000453527 ABCC5O15440 1437 aa25.93■■□□□ 1.74
CTSB-204ENST00000453527 ABCC10Q5T3U5 1492 aa25.92■■□□□ 1.74
CTSB-204ENST00000453527 CDC42BPAQ5VT25 1732 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms