RNA–Protein interactions for RNA: ENST00000453527.6

CTSB-204, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CTSB, Length 2,011 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-204ENST00000453527 NISCHQ9Y2I1 1504 aa39.31■■■■□ 3.88
CTSB-204ENST00000453527 CCDC180Q9P1Z9 1646 aa34.06■■■■□ 3.04
CTSB-204ENST00000453527 ZCCHC6Q5VYS8 1495 aaKnown RBP33.09■■■□□ 2.89
CTSB-204ENST00000453527 DCAF1Q9Y4B6 1507 aa32.47■■■□□ 2.79
CTSB-204ENST00000453527 DCAF8L2P0C7V8 631 aa32.41■■■□□ 2.78
CTSB-204ENST00000453527 SHROOM4Q9ULL8 1493 aa32.41■■■□□ 2.78
CTSB-204ENST00000453527 MYO15BQ96JP2 1530 aa31.93■■■□□ 2.7
CTSB-204ENST00000453527 ABCC9O60706 1549 aa31.9■■■□□ 2.7
CTSB-204ENST00000453527 NACADO15069 1562 aa31.63■■■□□ 2.65
CTSB-204ENST00000453527 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
CTSB-204ENST00000453527 SUPT5HO00267 1087 aaKnown RBP31.39■■■□□ 2.62
CTSB-204ENST00000453527 RB1CC1Q8TDY2 1594 aa31.27■■■□□ 2.6
CTSB-204ENST00000453527 UNC13AQ9UPW8 1703 aa30.72■■■□□ 2.51
CTSB-204ENST00000453527 RSF1Q96T23 1441 aaPredicted RBP30.67■■■□□ 2.5
CTSB-204ENST00000453527 CECR2Q9BXF3 1484 aa30.54■■■□□ 2.48
CTSB-204ENST00000453527 MROH2BQ7Z745 1585 aa30.41■■■□□ 2.46
CTSB-204ENST00000453527 BICRAQ9NZM4 1560 aa30.35■■■□□ 2.45
CTSB-204ENST00000453527 BAZ1AQ9NRL2 1556 aaPredicted RBP30.31■■■□□ 2.44
CTSB-204ENST00000453527 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
CTSB-204ENST00000453527 WIZO95785 1651 aa30.2■■■□□ 2.42
CTSB-204ENST00000453527 PABPN1Q86U42 306 aaKnown RBP eCLIP30.19■■■□□ 2.42
CTSB-204ENST00000453527 SMARCA4P51532 1647 aa30.14■■■□□ 2.41
CTSB-204ENST00000453527 TOP2AP11388 1531 aaKnown RBP29.84■■■□□ 2.37
CTSB-204ENST00000453527 PEG3Q9GZU2 1588 aa29.74■■■□□ 2.35
CTSB-204ENST00000453527 SMARCA2P51531 1590 aa29.6■■■□□ 2.33
CTSB-204ENST00000453527 CCDC88BA6NC98 1476 aa29.58■■■□□ 2.33
CTSB-204ENST00000453527 ATAD2BQ9ULI0 1458 aa29.54■■■□□ 2.32
CTSB-204ENST00000453527 EIF4G1Q04637 1599 aaKnown RBP29.51■■■□□ 2.31
CTSB-204ENST00000453527 TRIM41Q8WV44 630 aa29.47■■■□□ 2.31
CTSB-204ENST00000453527 BAZ1BQ9UIG0 1483 aaKnown RBP29.39■■■□□ 2.3
CTSB-204ENST00000453527 NCAPD3P42695 1498 aa29.21■■■□□ 2.27
CTSB-204ENST00000453527 HMGXB3Q12766 1538 aa29.18■■■□□ 2.26
CTSB-204ENST00000453527 LOC105371045A0A1W2PR82 267 aa29.15■■■□□ 2.26
CTSB-204ENST00000453527 ABCC8Q09428 1581 aa29.11■■■□□ 2.25
CTSB-204ENST00000453527 FAM9AQ8IZU1 332 aaPredicted RBP28.97■■■□□ 2.23
CTSB-204ENST00000453527 CC2D2AQ9P2K1 1620 aa28.87■■■□□ 2.21
CTSB-204ENST00000453527 WRNQ14191 1432 aaPredicted RBP eCLIP28.84■■■□□ 2.21
CTSB-204ENST00000453527 SYNJ1O43426 1573 aa28.72■■■□□ 2.19
CTSB-204ENST00000453527 CFTRP13569 1480 aa28.68■■■□□ 2.18
CTSB-204ENST00000453527 SOGA1O94964 1423 aa28.65■■■□□ 2.18
CTSB-204ENST00000453527 EEA1Q15075 1411 aa28.62■■■□□ 2.17
CTSB-204ENST00000453527 PRDM2Q13029 1718 aa28.56■■■□□ 2.16
CTSB-204ENST00000453527 TOP2BQ02880 1626 aa28.56■■■□□ 2.16
CTSB-204ENST00000453527 EHMT2Q96KQ7 1210 aa28.56■■■□□ 2.16
CTSB-204ENST00000453527 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
CTSB-204ENST00000453527 BIVM-ERCC5R4GMW8 1640 aa28.52■■■□□ 2.16
CTSB-204ENST00000453527 CADPSQ9ULU8 1353 aa28.5■■■□□ 2.15
CTSB-204ENST00000453527 CSRNP3Q8WYN3 585 aa28.48■■■□□ 2.15
CTSB-204ENST00000453527 CUX1P39880 1505 aa28.39■■■□□ 2.14
CTSB-204ENST00000453527 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.12
CTSB-204ENST00000453527 GOLGA3Q08378 1498 aa28.26■■■□□ 2.11
CTSB-204ENST00000453527 KIF21BO75037 1637 aa28.24■■■□□ 2.11
CTSB-204ENST00000453527 PCGF6Q9BYE7 350 aa28.23■■■□□ 2.11
CTSB-204ENST00000453527 CEP164Q9UPV0 1460 aa28.22■■■□□ 2.11
CTSB-204ENST00000453527 FANCD2Q9BXW9 1451 aa28.18■■■□□ 2.1
CTSB-204ENST00000453527 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
CTSB-204ENST00000453527 LAMC3Q9Y6N6 1575 aa28.15■■■□□ 2.1
CTSB-204ENST00000453527 CEP162Q5TB80 1403 aa28.15■■■□□ 2.1
CTSB-204ENST00000453527 NESP48681 1621 aa28.14■■■□□ 2.1
CTSB-204ENST00000453527 TRIM26Q12899 539 aaPredicted RBP28.11■■■□□ 2.09
CTSB-204ENST00000453527 DNAJC5BQ9UF47 199 aa28.08■■■□□ 2.08
CTSB-204ENST00000453527 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
CTSB-204ENST00000453527 RAPGEF2Q9Y4G8 1499 aa28.03■■■□□ 2.08
CTSB-204ENST00000453527 FGD5Q6ZNL6 1462 aa28.02■■■□□ 2.08
CTSB-204ENST00000453527 PRXQ9BXM0 1461 aa28■■■□□ 2.07
CTSB-204ENST00000453527 DNMBPQ6XZF7 1577 aa27.99■■■□□ 2.07
CTSB-204ENST00000453527 ERICH3Q5RHP9 1530 aa27.97■■■□□ 2.07
CTSB-204ENST00000453527 TOPBP1Q92547 1522 aa27.93■■■□□ 2.06
CTSB-204ENST00000453527 CUX2O14529 1486 aa27.91■■■□□ 2.06
CTSB-204ENST00000453527 PDS5BQ9NTI5 1447 aa27.91■■■□□ 2.06
CTSB-204ENST00000453527 CLIP1P30622 1438 aa27.84■■■□□ 2.05
CTSB-204ENST00000453527 POLA1P09884 1462 aaPredicted RBP27.82■■■□□ 2.04
CTSB-204ENST00000453527 URB2Q14146 1524 aaKnown RBP27.82■■■□□ 2.04
CTSB-204ENST00000453527 KIF21AQ7Z4S6 1674 aa27.8■■■□□ 2.04
CTSB-204ENST00000453527 IGF1RP08069 1367 aa27.8■■■□□ 2.04
CTSB-204ENST00000453527 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
CTSB-204ENST00000453527 RAD54L2Q9Y4B4 1467 aa27.76■■■□□ 2.03
CTSB-204ENST00000453527 PPARGC1BQ86YN6 1023 aaKnown RBP27.75■■■□□ 2.03
CTSB-204ENST00000453527 HRCP23327 699 aa27.73■■■□□ 2.03
CTSB-204ENST00000453527 CARMIL1Q5VZK9 1371 aa27.66■■■□□ 2.02
CTSB-204ENST00000453527 WDR97A6NE52 1622 aa27.65■■■□□ 2.02
CTSB-204ENST00000453527 VPS8Q8N3P4 1428 aa27.64■■■□□ 2.02
CTSB-204ENST00000453527 RANGAP1P46060 587 aaPredicted RBP27.6■■■□□ 2.01
CTSB-204ENST00000453527 CUL7Q14999 1698 aa27.53■■■□□ 2
CTSB-204ENST00000453527 MRC2Q9UBG0 1479 aa27.52■■■□□ 2
CTSB-204ENST00000453527 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
CTSB-204ENST00000453527 ARAP1Q96P48 1450 aa27.51■■□□□ 1.99
CTSB-204ENST00000453527 TARBP1Q13395 1621 aaKnown RBP27.49■■□□□ 1.99
CTSB-204ENST00000453527 TDRD9Q8NDG6 1382 aaKnown RBP27.46■■□□□ 1.99
CTSB-204ENST00000453527 GAPVD1Q14C86 1478 aa27.44■■□□□ 1.98
CTSB-204ENST00000453527 ARHGAP35Q9NRY4 1499 aa27.44■■□□□ 1.98
CTSB-204ENST00000453527 TTBK1Q5TCY1 1321 aaPredicted RBP27.43■■□□□ 1.98
CTSB-204ENST00000453527 APLP2Q06481 763 aa27.39■■□□□ 1.98
CTSB-204ENST00000453527 WDR62O43379 1518 aa27.37■■□□□ 1.97
CTSB-204ENST00000453527 CTTNBP2Q8WZ74 1663 aa27.3■■□□□ 1.96
CTSB-204ENST00000453527 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
CTSB-204ENST00000453527 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
CTSB-204ENST00000453527 IFT140Q96RY7 1462 aa27.25■■□□□ 1.95
CTSB-204ENST00000453527 AQRO60306 1485 aaKnown RBP eCLIP27.22■■□□□ 1.953e-7■■■■■ 33.7
CTSB-204ENST00000453527 THOC2Q8NI27 1593 aaKnown RBP27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms