RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 ADAMTS12P58397 1594 aa30.05■■■□□ 2.4
VRK2-205ENST00000432057 EFCAB5A4FU69 1503 aa30.05■■■□□ 2.4
VRK2-205ENST00000432057 ZNF608Q9ULD9 1512 aaPredicted RBP30.02■■■□□ 2.4
VRK2-205ENST00000432057 GRIN2BQ13224 1484 aa29.98■■■□□ 2.39
VRK2-205ENST00000432057 EIF4G3O43432 1585 aaKnown RBP29.97■■■□□ 2.39
VRK2-205ENST00000432057 PCF11O94913 1555 aaKnown RBP29.96■■■□□ 2.39
VRK2-205ENST00000432057 FHAD1B1AJZ9 1412 aa29.95■■■□□ 2.38
VRK2-205ENST00000432057 FHOD3Q2V2M9 1422 aa29.93■■■□□ 2.38
VRK2-205ENST00000432057 SAMD9Q5K651 1589 aa29.92■■■□□ 2.38
VRK2-205ENST00000432057 TIAM1Q13009 1591 aa29.92■■■□□ 2.38
VRK2-205ENST00000432057 KANK4Q5T7N3 995 aaPredicted RBP29.9■■■□□ 2.38
VRK2-205ENST00000432057 P3H3Q8IVL6 736 aa29.9■■■□□ 2.38
VRK2-205ENST00000432057 CFAP43Q8NDM7 1665 aa29.9■■■□□ 2.38
VRK2-205ENST00000432057 MAP3K1Q13233 1512 aa29.86■■■□□ 2.37
VRK2-205ENST00000432057 ZEB1P37275 1124 aaPredicted RBP29.86■■■□□ 2.37
VRK2-205ENST00000432057 SNAPC4Q5SXM2 1469 aa29.81■■■□□ 2.36
VRK2-205ENST00000432057 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.8■■■□□ 2.36
VRK2-205ENST00000432057 IQGAP2Q13576 1575 aa29.8■■■□□ 2.36
VRK2-205ENST00000432057 FYCO1Q9BQS8 1478 aa29.8■■■□□ 2.36
VRK2-205ENST00000432057 CASKIN1Q8WXD9 1431 aa29.74■■■□□ 2.35
VRK2-205ENST00000432057 FMN1Q68DA7 1419 aa29.72■■■□□ 2.35
VRK2-205ENST00000432057 LRRC9Q6ZRR7 1453 aa29.71■■■□□ 2.35
VRK2-205ENST00000432057 LRRIQ1Q96JM4 1722 aa29.7■■■□□ 2.35
VRK2-205ENST00000432057 HNRNPUL2Q1KMD3 747 aaKnown RBP29.7■■■□□ 2.35
VRK2-205ENST00000432057 CCER1Q8TC90 406 aaPredicted RBP29.69■■■□□ 2.34
VRK2-205ENST00000432057 RRBP1Q9P2E9 1410 aaKnown RBP29.67■■■□□ 2.34
VRK2-205ENST00000432057 GRIN2AQ12879 1464 aa29.67■■■□□ 2.34
VRK2-205ENST00000432057 MAGI1Q96QZ7 1491 aaPredicted RBP29.67■■■□□ 2.34
VRK2-205ENST00000432057 ATP1B4Q9UN42 357 aaPredicted RBP29.63■■■□□ 2.33
VRK2-205ENST00000432057 UGGT2Q9NYU1 1516 aa29.6■■■□□ 2.33
VRK2-205ENST00000432057 SYNJ2O15056 1496 aa29.57■■■□□ 2.32
VRK2-205ENST00000432057 KIAA0586Q9BVV6 1533 aa29.56■■■□□ 2.32
VRK2-205ENST00000432057 CEP170Q5SW79 1584 aa29.54■■■□□ 2.32
VRK2-205ENST00000432057 CCNB3Q8WWL7 1395 aa29.53■■■□□ 2.32
VRK2-205ENST00000432057 KIAA0556O60303 1618 aa29.5■■■□□ 2.31
VRK2-205ENST00000432057 PHLDB1Q86UU1 1377 aa29.48■■■□□ 2.31
VRK2-205ENST00000432057 HECW1Q76N89 1606 aa29.48■■■□□ 2.31
VRK2-205ENST00000432057 DISP1Q96F81 1524 aa29.45■■■□□ 2.3
VRK2-205ENST00000432057 CHMP7Q8WUX9 453 aaPredicted RBP29.44■■■□□ 2.3
VRK2-205ENST00000432057 NUP160Q12769 1436 aa29.38■■■□□ 2.29
VRK2-205ENST00000432057 CCDC18Q5T9S5 1454 aa29.38■■■□□ 2.29
VRK2-205ENST00000432057 EHBP1L1Q8N3D4 1523 aa29.37■■■□□ 2.29
VRK2-205ENST00000432057 FBLN2P98095 1184 aa29.37■■■□□ 2.29
VRK2-205ENST00000432057 SUPT6HQ7KZ85 1726 aaKnown RBP29.36■■■□□ 2.29
VRK2-205ENST00000432057 MTUS2Q5JR59 1369 aa29.36■■■□□ 2.29
VRK2-205ENST00000432057 MAGI3Q5TCQ9 1506 aa29.33■■■□□ 2.29
VRK2-205ENST00000432057 CHD1O14646 1710 aa29.32■■■□□ 2.28
VRK2-205ENST00000432057 EPRSP07814 1512 aaKnown RBP29.31■■■□□ 2.28
VRK2-205ENST00000432057 CDK13Q14004 1512 aaKnown RBP29.29■■■□□ 2.28
VRK2-205ENST00000432057 RAPGEF6Q8TEU7 1601 aa29.29■■■□□ 2.28
VRK2-205ENST00000432057 ITGAEP38570 1179 aa29.28■■■□□ 2.28
VRK2-205ENST00000432057 NCOA2Q15596 1464 aa29.27■■■□□ 2.28
VRK2-205ENST00000432057 FGD6Q6ZV73 1430 aa29.23■■■□□ 2.27
VRK2-205ENST00000432057 FAM50AQ14320 339 aaKnown RBP29.22■■■□□ 2.27
VRK2-205ENST00000432057 ARHGEF11O15085 1522 aa29.21■■■□□ 2.27
VRK2-205ENST00000432057 NUP153P49790 1475 aaKnown RBP29.17■■■□□ 2.26
VRK2-205ENST00000432057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.16■■■□□ 2.26
VRK2-205ENST00000432057 MYOM3Q5VTT5 1437 aa29.16■■■□□ 2.26
VRK2-205ENST00000432057 DHX57Q6P158 1386 aaKnown RBP29.16■■■□□ 2.26
VRK2-205ENST00000432057 CARMIL2Q6F5E8 1435 aa29.16■■■□□ 2.26
VRK2-205ENST00000432057 JPH4Q96JJ6 628 aa29.13■■■□□ 2.25
VRK2-205ENST00000432057 ARID3CA6NKF2 412 aa29.12■■■□□ 2.25
VRK2-205ENST00000432057 PTPN23Q9H3S7 1636 aa29.11■■■□□ 2.25
VRK2-205ENST00000432057 RAB3GAP2Q9H2M9 1393 aa29.09■■■□□ 2.25
VRK2-205ENST00000432057 PLB1Q6P1J6 1458 aa29.08■■■□□ 2.25
VRK2-205ENST00000432057 SETD5Q9C0A6 1442 aa29.06■■■□□ 2.24
VRK2-205ENST00000432057 ABCA8O94911 1581 aa29■■■□□ 2.23
VRK2-205ENST00000432057 SHROOM2Q13796 1616 aa29■■■□□ 2.23
VRK2-205ENST00000432057 CLSPNQ9HAW4 1339 aa29■■■□□ 2.23
VRK2-205ENST00000432057 TCOF1Q13428 1488 aaKnown RBP28.98■■■□□ 2.23
VRK2-205ENST00000432057 PRG4Q92954 1404 aaPredicted RBP28.97■■■□□ 2.23
VRK2-205ENST00000432057 PTPRKQ15262 1439 aa28.95■■■□□ 2.22
VRK2-205ENST00000432057 ADCY10Q96PN6 1610 aa28.93■■■□□ 2.22
VRK2-205ENST00000432057 MIA2Q96PC5 1412 aa28.89■■■□□ 2.22
VRK2-205ENST00000432057 MAPKBP1O60336 1514 aa28.89■■■□□ 2.22
VRK2-205ENST00000432057 TROQ12816 1431 aaPredicted RBP28.89■■■□□ 2.22
VRK2-205ENST00000432057 KIF14Q15058 1648 aa28.89■■■□□ 2.21
VRK2-205ENST00000432057 CDK11AQ9UQ88 783 aaPredicted RBP28.87■■■□□ 2.21
VRK2-205ENST00000432057 ITSN2Q9NZM3 1697 aa28.86■■■□□ 2.21
VRK2-205ENST00000432057 HFM1A2PYH4 1435 aa28.84■■■□□ 2.21
VRK2-205ENST00000432057 GCC2Q8IWJ2 1684 aa28.84■■■□□ 2.21
VRK2-205ENST00000432057 CLASP1Q7Z460 1538 aa28.84■■■□□ 2.21
VRK2-205ENST00000432057 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
VRK2-205ENST00000432057 PTPRGP23470 1445 aa28.81■■■□□ 2.2
VRK2-205ENST00000432057 ATP10BO94823 1461 aa28.79■■■□□ 2.2
VRK2-205ENST00000432057 NAIPQ13075 1403 aa28.77■■■□□ 2.2
VRK2-205ENST00000432057 DNMT1P26358 1616 aaKnown RBP28.76■■■□□ 2.19
VRK2-205ENST00000432057 CDC42BPAQ5VT25 1732 aa28.74■■■□□ 2.19
VRK2-205ENST00000432057 GPATCH8Q9UKJ3 1502 aaKnown RBP28.69■■■□□ 2.18
VRK2-205ENST00000432057 AKNAQ7Z591 1439 aa28.68■■■□□ 2.18
VRK2-205ENST00000432057 DAPK1P53355 1430 aa28.67■■■□□ 2.18
VRK2-205ENST00000432057 CAMSAP2Q08AD1 1489 aa28.67■■■□□ 2.18
VRK2-205ENST00000432057 UACAQ9BZF9 1416 aa28.67■■■□□ 2.18
VRK2-205ENST00000432057 ZNF316A6NFI3 1004 aaPredicted RBP28.66■■■□□ 2.18
VRK2-205ENST00000432057 CHIC2Q9UKJ5 165 aa28.66■■■□□ 2.18
VRK2-205ENST00000432057 KDM6BO15054 1643 aa28.66■■■□□ 2.18
VRK2-205ENST00000432057 ABCC10Q5T3U5 1492 aa28.64■■■□□ 2.18
VRK2-205ENST00000432057 ZNF644Q9H582 1327 aaPredicted RBP28.64■■■□□ 2.18
VRK2-205ENST00000432057 CROCC2H7BZ55 1655 aa28.64■■■□□ 2.18
VRK2-205ENST00000432057 PLEKHD1A6NEE1 506 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms