RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 CTTNBP2Q8WZ74 1663 aa26.61■■□□□ 1.85
HDAC10-203ENST00000415993 GRIN2BQ13224 1484 aa26.57■■□□□ 1.84
HDAC10-203ENST00000415993 FHAD1B1AJZ9 1412 aa26.56■■□□□ 1.84
HDAC10-203ENST00000415993 EFCAB5A4FU69 1503 aa26.53■■□□□ 1.84
HDAC10-203ENST00000415993 ADAMTS12P58397 1594 aa26.53■■□□□ 1.84
HDAC10-203ENST00000415993 KANK4Q5T7N3 995 aaPredicted RBP26.49■■□□□ 1.83
HDAC10-203ENST00000415993 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
HDAC10-203ENST00000415993 P3H3Q8IVL6 736 aa26.46■■□□□ 1.83
HDAC10-203ENST00000415993 FHOD3Q2V2M9 1422 aa26.45■■□□□ 1.83
HDAC10-203ENST00000415993 MAP3K1Q13233 1512 aa26.42■■□□□ 1.82
HDAC10-203ENST00000415993 SAMD9Q5K651 1589 aa26.41■■□□□ 1.82
HDAC10-203ENST00000415993 SNAPC4Q5SXM2 1469 aa26.38■■□□□ 1.81
HDAC10-203ENST00000415993 PCF11O94913 1555 aaKnown RBP26.37■■□□□ 1.81
HDAC10-203ENST00000415993 TIAM1Q13009 1591 aa26.37■■□□□ 1.81
HDAC10-203ENST00000415993 ZEB1P37275 1124 aaPredicted RBP26.33■■□□□ 1.81
HDAC10-203ENST00000415993 CASKIN1Q8WXD9 1431 aa26.32■■□□□ 1.8
HDAC10-203ENST00000415993 FMN1Q68DA7 1419 aa26.32■■□□□ 1.8
HDAC10-203ENST00000415993 FYCO1Q9BQS8 1478 aa26.32■■□□□ 1.8
HDAC10-203ENST00000415993 MAGI1Q96QZ7 1491 aaPredicted RBP26.3■■□□□ 1.8
HDAC10-203ENST00000415993 IQGAP2Q13576 1575 aa26.3■■□□□ 1.8
HDAC10-203ENST00000415993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.28■■□□□ 1.8
HDAC10-203ENST00000415993 GRIN2AQ12879 1464 aa26.27■■□□□ 1.8
HDAC10-203ENST00000415993 LRRC9Q6ZRR7 1453 aa26.27■■□□□ 1.8
HDAC10-203ENST00000415993 CFAP43Q8NDM7 1665 aa26.26■■□□□ 1.79
HDAC10-203ENST00000415993 RRBP1Q9P2E9 1410 aaKnown RBP26.24■■□□□ 1.79
HDAC10-203ENST00000415993 KIAA0586Q9BVV6 1533 aa26.22■■□□□ 1.79
HDAC10-203ENST00000415993 SYNJ2O15056 1496 aa26.22■■□□□ 1.79
HDAC10-203ENST00000415993 HNRNPUL2Q1KMD3 747 aaKnown RBP26.21■■□□□ 1.79
HDAC10-203ENST00000415993 UGGT2Q9NYU1 1516 aa26.2■■□□□ 1.79
HDAC10-203ENST00000415993 ATP1B4Q9UN42 357 aaPredicted RBP26.18■■□□□ 1.78
HDAC10-203ENST00000415993 CCER1Q8TC90 406 aaPredicted RBP26.17■■□□□ 1.78
HDAC10-203ENST00000415993 CHMP7Q8WUX9 453 aaPredicted RBP26.15■■□□□ 1.78
HDAC10-203ENST00000415993 CCNB3Q8WWL7 1395 aa26.12■■□□□ 1.77
HDAC10-203ENST00000415993 CEP170Q5SW79 1584 aa26.11■■□□□ 1.77
HDAC10-203ENST00000415993 DISP1Q96F81 1524 aa26.09■■□□□ 1.77
HDAC10-203ENST00000415993 LRRIQ1Q96JM4 1722 aa26.09■■□□□ 1.77
HDAC10-203ENST00000415993 PHLDB1Q86UU1 1377 aa26.08■■□□□ 1.77
HDAC10-203ENST00000415993 NUP160Q12769 1436 aa26.08■■□□□ 1.77
HDAC10-203ENST00000415993 FBLN2P98095 1184 aa26.05■■□□□ 1.76
HDAC10-203ENST00000415993 KIAA0556O60303 1618 aa26.04■■□□□ 1.76
HDAC10-203ENST00000415993 HECW1Q76N89 1606 aa25.97■■□□□ 1.75
HDAC10-203ENST00000415993 CCDC18Q5T9S5 1454 aa25.97■■□□□ 1.75
HDAC10-203ENST00000415993 MTUS2Q5JR59 1369 aa25.96■■□□□ 1.75
HDAC10-203ENST00000415993 EPRSP07814 1512 aaKnown RBP25.93■■□□□ 1.74
HDAC10-203ENST00000415993 JPH4Q96JJ6 628 aa25.91■■□□□ 1.74
HDAC10-203ENST00000415993 MAGI3Q5TCQ9 1506 aa25.91■■□□□ 1.74
HDAC10-203ENST00000415993 EHBP1L1Q8N3D4 1523 aa25.9■■□□□ 1.74
HDAC10-203ENST00000415993 NCOA2Q15596 1464 aa25.87■■□□□ 1.73
HDAC10-203ENST00000415993 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.86■■□□□ 1.73
HDAC10-203ENST00000415993 CDK13Q14004 1512 aaKnown RBP25.85■■□□□ 1.73
HDAC10-203ENST00000415993 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
HDAC10-203ENST00000415993 ITGAEP38570 1179 aa25.84■■□□□ 1.73
HDAC10-203ENST00000415993 CARMIL2Q6F5E8 1435 aa25.84■■□□□ 1.73
HDAC10-203ENST00000415993 FGD6Q6ZV73 1430 aa25.84■■□□□ 1.73
HDAC10-203ENST00000415993 SUPT6HQ7KZ85 1726 aaKnown RBP25.83■■□□□ 1.73
HDAC10-203ENST00000415993 NUP153P49790 1475 aaKnown RBP25.83■■□□□ 1.73
HDAC10-203ENST00000415993 FAM50AQ14320 339 aaKnown RBP25.82■■□□□ 1.72
HDAC10-203ENST00000415993 RAPGEF6Q8TEU7 1601 aa25.82■■□□□ 1.72
HDAC10-203ENST00000415993 CHD1O14646 1710 aa25.79■■□□□ 1.72
HDAC10-203ENST00000415993 MYOM3Q5VTT5 1437 aa25.78■■□□□ 1.72
HDAC10-203ENST00000415993 DHX57Q6P158 1386 aaKnown RBP25.76■■□□□ 1.71
HDAC10-203ENST00000415993 PLB1Q6P1J6 1458 aa25.75■■□□□ 1.71
HDAC10-203ENST00000415993 ARID3CA6NKF2 412 aa25.75■■□□□ 1.71
HDAC10-203ENST00000415993 RAB3GAP2Q9H2M9 1393 aa25.7■■□□□ 1.7
HDAC10-203ENST00000415993 PRG4Q92954 1404 aaPredicted RBP25.69■■□□□ 1.7
HDAC10-203ENST00000415993 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
HDAC10-203ENST00000415993 SETD5Q9C0A6 1442 aa25.68■■□□□ 1.7
HDAC10-203ENST00000415993 ABCA8O94911 1581 aa25.65■■□□□ 1.7
HDAC10-203ENST00000415993 SHROOM2Q13796 1616 aa25.65■■□□□ 1.7
HDAC10-203ENST00000415993 PTPN23Q9H3S7 1636 aa25.64■■□□□ 1.69
HDAC10-203ENST00000415993 PTPRKQ15262 1439 aa25.63■■□□□ 1.69
HDAC10-203ENST00000415993 TCOF1Q13428 1488 aaKnown RBP25.62■■□□□ 1.69
HDAC10-203ENST00000415993 CDK11AQ9UQ88 783 aaPredicted RBP25.62■■□□□ 1.69
HDAC10-203ENST00000415993 MIA2Q96PC5 1412 aa25.6■■□□□ 1.69
HDAC10-203ENST00000415993 TROQ12816 1431 aaPredicted RBP25.58■■□□□ 1.69
HDAC10-203ENST00000415993 PTPRGP23470 1445 aa25.57■■□□□ 1.68
HDAC10-203ENST00000415993 ATP10BO94823 1461 aa25.53■■□□□ 1.68
HDAC10-203ENST00000415993 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
HDAC10-203ENST00000415993 HFM1A2PYH4 1435 aa25.52■■□□□ 1.68
HDAC10-203ENST00000415993 ERCC6L2Q5T890 1561 aa25.49■■□□□ 1.67
HDAC10-203ENST00000415993 ADCY10Q96PN6 1610 aa25.49■■□□□ 1.67
HDAC10-203ENST00000415993 MAPKBP1O60336 1514 aa25.48■■□□□ 1.67
HDAC10-203ENST00000415993 KIF14Q15058 1648 aa25.45■■□□□ 1.67
HDAC10-203ENST00000415993 NAIPQ13075 1403 aa25.45■■□□□ 1.67
HDAC10-203ENST00000415993 UACAQ9BZF9 1416 aa25.43■■□□□ 1.66
HDAC10-203ENST00000415993 PLEKHD1A6NEE1 506 aa25.42■■□□□ 1.66
HDAC10-203ENST00000415993 GPATCH8Q9UKJ3 1502 aaKnown RBP25.42■■□□□ 1.66
HDAC10-203ENST00000415993 ZNF644Q9H582 1327 aaPredicted RBP25.39■■□□□ 1.66
HDAC10-203ENST00000415993 AKNAQ7Z591 1439 aa25.38■■□□□ 1.65
HDAC10-203ENST00000415993 ABCC10Q5T3U5 1492 aa25.37■■□□□ 1.65
HDAC10-203ENST00000415993 ITSN2Q9NZM3 1697 aa25.36■■□□□ 1.65
HDAC10-203ENST00000415993 DAPK1P53355 1430 aa25.35■■□□□ 1.65
HDAC10-203ENST00000415993 CHIC2Q9UKJ5 165 aa25.34■■□□□ 1.65
HDAC10-203ENST00000415993 ABCC5O15440 1437 aa25.34■■□□□ 1.65
HDAC10-203ENST00000415993 DNMT1P26358 1616 aaKnown RBP25.34■■□□□ 1.65
HDAC10-203ENST00000415993 CFDP1Q9UEE9 299 aaPredicted RBP25.34■■□□□ 1.65
HDAC10-203ENST00000415993 ABCC2Q92887 1545 aa25.33■■□□□ 1.65
HDAC10-203ENST00000415993 RRP7BPQ9NSQ0 103 aa25.32■■□□□ 1.64
HDAC10-203ENST00000415993 CAMSAP2Q08AD1 1489 aa25.31■■□□□ 1.64
HDAC10-203ENST00000415993 GCC2Q8IWJ2 1684 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms