RNA–Protein interactions for RNA: ENST00000415993.5

HDAC10-203, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best)

Gene HDAC10, Length 2,375 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-203ENST00000415993 NISCHQ9Y2I1 1504 aa38.46■■■■□ 3.75
HDAC10-203ENST00000415993 CCDC180Q9P1Z9 1646 aa33.28■■■□□ 2.92
HDAC10-203ENST00000415993 ZCCHC6Q5VYS8 1495 aaKnown RBP32.38■■■□□ 2.77
HDAC10-203ENST00000415993 DCAF1Q9Y4B6 1507 aa31.76■■■□□ 2.67
HDAC10-203ENST00000415993 DCAF8L2P0C7V8 631 aa31.68■■■□□ 2.66
HDAC10-203ENST00000415993 SHROOM4Q9ULL8 1493 aa31.67■■■□□ 2.66
HDAC10-203ENST00000415993 ABCC9O60706 1549 aa31.28■■■□□ 2.6
HDAC10-203ENST00000415993 MYO15BQ96JP2 1530 aa31.26■■■□□ 2.59
HDAC10-203ENST00000415993 NACADO15069 1562 aa30.95■■■□□ 2.55
HDAC10-203ENST00000415993 SCRIBQ14160 1630 aa30.73■■■□□ 2.51
HDAC10-203ENST00000415993 SUPT5HO00267 1087 aaKnown RBP30.63■■■□□ 2.49
HDAC10-203ENST00000415993 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
HDAC10-203ENST00000415993 UNC13AQ9UPW8 1703 aa30.03■■■□□ 2.4
HDAC10-203ENST00000415993 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
HDAC10-203ENST00000415993 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
HDAC10-203ENST00000415993 MROH2BQ7Z745 1585 aa29.76■■■□□ 2.35
HDAC10-203ENST00000415993 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.35
HDAC10-203ENST00000415993 BAZ1AQ9NRL2 1556 aaPredicted RBP29.63■■■□□ 2.33
HDAC10-203ENST00000415993 PABPN1Q86U42 306 aaKnown RBP eCLIP29.62■■■□□ 2.338e-8■■□□□ 13.3
HDAC10-203ENST00000415993 CHIC1Q5VXU3 224 aa29.52■■■□□ 2.32
HDAC10-203ENST00000415993 WIZO95785 1651 aa29.51■■■□□ 2.31
HDAC10-203ENST00000415993 SMARCA4P51532 1647 aa29.47■■■□□ 2.31
HDAC10-203ENST00000415993 TOP2AP11388 1531 aaKnown RBP29.17■■■□□ 2.26
HDAC10-203ENST00000415993 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
HDAC10-203ENST00000415993 SMARCA2P51531 1590 aa28.94■■■□□ 2.22
HDAC10-203ENST00000415993 CCDC88BA6NC98 1476 aa28.94■■■□□ 2.22
HDAC10-203ENST00000415993 ATAD2BQ9ULI0 1458 aa28.94■■■□□ 2.22
HDAC10-203ENST00000415993 EIF4G1Q04637 1599 aaKnown RBP28.86■■■□□ 2.21
HDAC10-203ENST00000415993 BAZ1BQ9UIG0 1483 aaKnown RBP28.76■■■□□ 2.19
HDAC10-203ENST00000415993 TRIM41Q8WV44 630 aa28.74■■■□□ 2.19
HDAC10-203ENST00000415993 NCAPD3P42695 1498 aa28.63■■■□□ 2.17
HDAC10-203ENST00000415993 HMGXB3Q12766 1538 aa28.57■■■□□ 2.16
HDAC10-203ENST00000415993 ABCC8Q09428 1581 aa28.44■■■□□ 2.14
HDAC10-203ENST00000415993 LOC105371045A0A1W2PR82 267 aa28.44■■■□□ 2.14
HDAC10-203ENST00000415993 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
HDAC10-203ENST00000415993 FAM9AQ8IZU1 332 aaPredicted RBP28.26■■■□□ 2.12
HDAC10-203ENST00000415993 WRNQ14191 1432 aaPredicted RBP eCLIP28.2■■■□□ 2.1
HDAC10-203ENST00000415993 CFTRP13569 1480 aa28.09■■■□□ 2.09
HDAC10-203ENST00000415993 SYNJ1O43426 1573 aa28.08■■■□□ 2.09
HDAC10-203ENST00000415993 SOGA1O94964 1423 aa28.01■■■□□ 2.07
HDAC10-203ENST00000415993 CADPSQ9ULU8 1353 aa27.92■■■□□ 2.06
HDAC10-203ENST00000415993 EEA1Q15075 1411 aa27.91■■■□□ 2.06
HDAC10-203ENST00000415993 TOP2BQ02880 1626 aa27.91■■■□□ 2.06
HDAC10-203ENST00000415993 RUSC2Q8N2Y8 1516 aa27.9■■■□□ 2.06
HDAC10-203ENST00000415993 EHMT2Q96KQ7 1210 aa27.87■■■□□ 2.05
HDAC10-203ENST00000415993 BIVM-ERCC5R4GMW8 1640 aa27.85■■■□□ 2.05
HDAC10-203ENST00000415993 PRDM2Q13029 1718 aa27.84■■■□□ 2.05
HDAC10-203ENST00000415993 CSRNP3Q8WYN3 585 aa27.8■■■□□ 2.04
HDAC10-203ENST00000415993 CUX1P39880 1505 aa27.79■■■□□ 2.04
HDAC10-203ENST00000415993 DNAJC5BQ9UF47 199 aa27.64■■■□□ 2.02
HDAC10-203ENST00000415993 NESP48681 1621 aa27.6■■■□□ 2.01
HDAC10-203ENST00000415993 FANCD2Q9BXW9 1451 aa27.6■■■□□ 2.01
HDAC10-203ENST00000415993 TNIKQ9UKE5 1360 aa27.58■■■□□ 2.01
HDAC10-203ENST00000415993 GOLGA3Q08378 1498 aa27.57■■■□□ 2
HDAC10-203ENST00000415993 KIF21BO75037 1637 aa27.55■■■□□ 2
HDAC10-203ENST00000415993 LAMC3Q9Y6N6 1575 aa27.54■■■□□ 2
HDAC10-203ENST00000415993 CEP164Q9UPV0 1460 aa27.54■■■□□ 2
HDAC10-203ENST00000415993 CEP162Q5TB80 1403 aa27.47■■□□□ 1.99
HDAC10-203ENST00000415993 UBTFP17480 764 aaKnown RBP27.45■■□□□ 1.99
HDAC10-203ENST00000415993 PCGF6Q9BYE7 350 aa27.45■■□□□ 1.98
HDAC10-203ENST00000415993 KIF27Q86VH2 1401 aa27.43■■□□□ 1.98
HDAC10-203ENST00000415993 FGD5Q6ZNL6 1462 aa27.42■■□□□ 1.98
HDAC10-203ENST00000415993 RAPGEF2Q9Y4G8 1499 aa27.41■■□□□ 1.98
HDAC10-203ENST00000415993 DNMBPQ6XZF7 1577 aa27.38■■□□□ 1.97
HDAC10-203ENST00000415993 PRXQ9BXM0 1461 aa27.38■■□□□ 1.97
HDAC10-203ENST00000415993 TOPBP1Q92547 1522 aa27.34■■□□□ 1.97
HDAC10-203ENST00000415993 PDS5BQ9NTI5 1447 aa27.33■■□□□ 1.97
HDAC10-203ENST00000415993 TRIM26Q12899 539 aaPredicted RBP27.32■■□□□ 1.96
HDAC10-203ENST00000415993 ERICH3Q5RHP9 1530 aa27.31■■□□□ 1.96
HDAC10-203ENST00000415993 CUX2O14529 1486 aa27.3■■□□□ 1.96
HDAC10-203ENST00000415993 URB2Q14146 1524 aaKnown RBP27.26■■□□□ 1.95
HDAC10-203ENST00000415993 POLA1P09884 1462 aaPredicted RBP27.25■■□□□ 1.95
HDAC10-203ENST00000415993 IGF1RP08069 1367 aa27.22■■□□□ 1.95
HDAC10-203ENST00000415993 KIF21AQ7Z4S6 1674 aa27.2■■□□□ 1.94
HDAC10-203ENST00000415993 RAD54L2Q9Y4B4 1467 aa27.19■■□□□ 1.94
HDAC10-203ENST00000415993 ABCA10Q8WWZ4 1543 aa27.18■■□□□ 1.94
HDAC10-203ENST00000415993 CLIP1P30622 1438 aa27.16■■□□□ 1.94
HDAC10-203ENST00000415993 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
HDAC10-203ENST00000415993 CARMIL1Q5VZK9 1371 aa27.05■■□□□ 1.92
HDAC10-203ENST00000415993 WDR97A6NE52 1622 aa27.03■■□□□ 1.92
HDAC10-203ENST00000415993 VPS8Q8N3P4 1428 aa26.98■■□□□ 1.91
HDAC10-203ENST00000415993 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
HDAC10-203ENST00000415993 RANGAP1P46060 587 aaPredicted RBP26.95■■□□□ 1.9
HDAC10-203ENST00000415993 HRCP23327 699 aa26.92■■□□□ 1.9
HDAC10-203ENST00000415993 ABCA5Q8WWZ7 1642 aa26.92■■□□□ 1.9
HDAC10-203ENST00000415993 TARBP1Q13395 1621 aaKnown RBP26.91■■□□□ 1.9
HDAC10-203ENST00000415993 TDRD9Q8NDG6 1382 aaKnown RBP26.9■■□□□ 1.9
HDAC10-203ENST00000415993 ARAP1Q96P48 1450 aa26.88■■□□□ 1.89
HDAC10-203ENST00000415993 CUL7Q14999 1698 aa26.86■■□□□ 1.89
HDAC10-203ENST00000415993 GAPVD1Q14C86 1478 aa26.85■■□□□ 1.89
HDAC10-203ENST00000415993 WDR62O43379 1518 aa26.82■■□□□ 1.88
HDAC10-203ENST00000415993 ARHGAP35Q9NRY4 1499 aa26.82■■□□□ 1.88
HDAC10-203ENST00000415993 TTBK1Q5TCY1 1321 aaPredicted RBP26.75■■□□□ 1.87
HDAC10-203ENST00000415993 ERCC6Q03468 1493 aa26.72■■□□□ 1.87
HDAC10-203ENST00000415993 IFT140Q96RY7 1462 aa26.69■■□□□ 1.86
HDAC10-203ENST00000415993 AQRO60306 1485 aaKnown RBP eCLIP26.67■■□□□ 1.863e-7■■■□□ 15.1
HDAC10-203ENST00000415993 THOC2Q8NI27 1593 aaKnown RBP26.67■■□□□ 1.86
HDAC10-203ENST00000415993 APLP2Q06481 763 aa26.65■■□□□ 1.86
HDAC10-203ENST00000415993 PBRM1Q86U86 1689 aa26.62■■□□□ 1.85
HDAC10-203ENST00000415993 ZNF608Q9ULD9 1512 aaPredicted RBP26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 670.6 ms