RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 ZNF608Q9ULD9 1512 aaPredicted RBP30.62■■■□□ 2.49
PDLIM5-205ENST00000380180 GRIN2BQ13224 1484 aa30.58■■■□□ 2.49
PDLIM5-205ENST00000380180 FHAD1B1AJZ9 1412 aa30.54■■■□□ 2.48
PDLIM5-205ENST00000380180 ADAMTS12P58397 1594 aa30.53■■■□□ 2.48
PDLIM5-205ENST00000380180 EIF4G3O43432 1585 aaKnown RBP30.5■■■□□ 2.47
PDLIM5-205ENST00000380180 EFCAB5A4FU69 1503 aa30.49■■■□□ 2.47
PDLIM5-205ENST00000380180 P3H3Q8IVL6 736 aa30.47■■■□□ 2.47
PDLIM5-205ENST00000380180 KANK4Q5T7N3 995 aaPredicted RBP30.4■■■□□ 2.46
PDLIM5-205ENST00000380180 FHOD3Q2V2M9 1422 aa30.4■■■□□ 2.46
PDLIM5-205ENST00000380180 SNAPC4Q5SXM2 1469 aa30.37■■■□□ 2.45
PDLIM5-205ENST00000380180 SAMD9Q5K651 1589 aa30.36■■■□□ 2.45
PDLIM5-205ENST00000380180 PCF11O94913 1555 aaKnown RBP30.32■■■□□ 2.44
PDLIM5-205ENST00000380180 MAP3K1Q13233 1512 aa30.31■■■□□ 2.44
PDLIM5-205ENST00000380180 TIAM1Q13009 1591 aa30.3■■■□□ 2.44
PDLIM5-205ENST00000380180 IQGAP2Q13576 1575 aa30.29■■■□□ 2.44
PDLIM5-205ENST00000380180 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
PDLIM5-205ENST00000380180 FMN1Q68DA7 1419 aa30.24■■■□□ 2.43
PDLIM5-205ENST00000380180 GRIN2AQ12879 1464 aa30.23■■■□□ 2.43
PDLIM5-205ENST00000380180 FYCO1Q9BQS8 1478 aa30.23■■■□□ 2.43
PDLIM5-205ENST00000380180 CASKIN1Q8WXD9 1431 aa30.22■■■□□ 2.43
PDLIM5-205ENST00000380180 CFAP43Q8NDM7 1665 aa30.21■■■□□ 2.43
PDLIM5-205ENST00000380180 ATP1B4Q9UN42 357 aaPredicted RBP30.2■■■□□ 2.42
PDLIM5-205ENST00000380180 ZEB1P37275 1124 aaPredicted RBP30.18■■■□□ 2.42
PDLIM5-205ENST00000380180 SYNJ2O15056 1496 aa30.17■■■□□ 2.42
PDLIM5-205ENST00000380180 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.15■■■□□ 2.42
PDLIM5-205ENST00000380180 LRRC9Q6ZRR7 1453 aa30.15■■■□□ 2.42
PDLIM5-205ENST00000380180 KIAA0586Q9BVV6 1533 aa30.15■■■□□ 2.42
PDLIM5-205ENST00000380180 CHMP7Q8WUX9 453 aaPredicted RBP30.14■■■□□ 2.42
PDLIM5-205ENST00000380180 HNRNPUL2Q1KMD3 747 aaKnown RBP30.13■■■□□ 2.41
PDLIM5-205ENST00000380180 UGGT2Q9NYU1 1516 aa30.12■■■□□ 2.41
PDLIM5-205ENST00000380180 LRRIQ1Q96JM4 1722 aa30.08■■■□□ 2.41
PDLIM5-205ENST00000380180 RRBP1Q9P2E9 1410 aaKnown RBP30.07■■■□□ 2.4
PDLIM5-205ENST00000380180 FBLN2P98095 1184 aa30.07■■■□□ 2.4
PDLIM5-205ENST00000380180 CEP170Q5SW79 1584 aa30.06■■■□□ 2.4
PDLIM5-205ENST00000380180 CCER1Q8TC90 406 aaPredicted RBP30.05■■■□□ 2.4
PDLIM5-205ENST00000380180 DISP1Q96F81 1524 aa29.97■■■□□ 2.39
PDLIM5-205ENST00000380180 KIAA0556O60303 1618 aa29.97■■■□□ 2.39
PDLIM5-205ENST00000380180 CCNB3Q8WWL7 1395 aa29.97■■■□□ 2.39
PDLIM5-205ENST00000380180 NUP160Q12769 1436 aa29.96■■■□□ 2.39
PDLIM5-205ENST00000380180 PHLDB1Q86UU1 1377 aa29.92■■■□□ 2.38
PDLIM5-205ENST00000380180 HECW1Q76N89 1606 aa29.9■■■□□ 2.38
PDLIM5-205ENST00000380180 MTUS2Q5JR59 1369 aa29.86■■■□□ 2.37
PDLIM5-205ENST00000380180 CCDC18Q5T9S5 1454 aa29.85■■■□□ 2.37
PDLIM5-205ENST00000380180 CHD1O14646 1710 aa29.84■■■□□ 2.37
PDLIM5-205ENST00000380180 JPH4Q96JJ6 628 aa29.83■■■□□ 2.37
PDLIM5-205ENST00000380180 EPRSP07814 1512 aaKnown RBP29.8■■■□□ 2.36
PDLIM5-205ENST00000380180 EHBP1L1Q8N3D4 1523 aa29.76■■■□□ 2.36
PDLIM5-205ENST00000380180 SUPT6HQ7KZ85 1726 aaKnown RBP29.76■■■□□ 2.35
PDLIM5-205ENST00000380180 MAGI3Q5TCQ9 1506 aa29.75■■■□□ 2.35
PDLIM5-205ENST00000380180 CARMIL2Q6F5E8 1435 aa29.75■■■□□ 2.35
PDLIM5-205ENST00000380180 RAPGEF6Q8TEU7 1601 aa29.74■■■□□ 2.35
PDLIM5-205ENST00000380180 ITGAEP38570 1179 aa29.74■■■□□ 2.35
PDLIM5-205ENST00000380180 CDK13Q14004 1512 aaKnown RBP29.74■■■□□ 2.35
PDLIM5-205ENST00000380180 NCOA2Q15596 1464 aa29.71■■■□□ 2.35
PDLIM5-205ENST00000380180 FAM50AQ14320 339 aaKnown RBP29.71■■■□□ 2.35
PDLIM5-205ENST00000380180 ARID3CA6NKF2 412 aa29.68■■■□□ 2.34
PDLIM5-205ENST00000380180 NUP153P49790 1475 aaKnown RBP29.67■■■□□ 2.34
PDLIM5-205ENST00000380180 FGD6Q6ZV73 1430 aa29.66■■■□□ 2.34
PDLIM5-205ENST00000380180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.64■■■□□ 2.34
PDLIM5-205ENST00000380180 ARHGEF11O15085 1522 aa29.63■■■□□ 2.33
PDLIM5-205ENST00000380180 MYOM3Q5VTT5 1437 aa29.62■■■□□ 2.33
PDLIM5-205ENST00000380180 PLB1Q6P1J6 1458 aa29.61■■■□□ 2.33
PDLIM5-205ENST00000380180 PRG4Q92954 1404 aaPredicted RBP29.58■■■□□ 2.33
PDLIM5-205ENST00000380180 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
PDLIM5-205ENST00000380180 DHX57Q6P158 1386 aaKnown RBP29.51■■■□□ 2.32
PDLIM5-205ENST00000380180 ABCA8O94911 1581 aa29.51■■■□□ 2.31
PDLIM5-205ENST00000380180 PTPN23Q9H3S7 1636 aa29.5■■■□□ 2.31
PDLIM5-205ENST00000380180 CDK11AQ9UQ88 783 aaPredicted RBP29.5■■■□□ 2.31
PDLIM5-205ENST00000380180 SETD5Q9C0A6 1442 aa29.48■■■□□ 2.31
PDLIM5-205ENST00000380180 RAB3GAP2Q9H2M9 1393 aa29.48■■■□□ 2.31
PDLIM5-205ENST00000380180 PTPRGP23470 1445 aa29.44■■■□□ 2.3
PDLIM5-205ENST00000380180 CLSPNQ9HAW4 1339 aa29.41■■■□□ 2.3
PDLIM5-205ENST00000380180 TCOF1Q13428 1488 aaKnown RBP29.4■■■□□ 2.3
PDLIM5-205ENST00000380180 TROQ12816 1431 aaPredicted RBP29.4■■■□□ 2.3
PDLIM5-205ENST00000380180 MIA2Q96PC5 1412 aa29.39■■■□□ 2.3
PDLIM5-205ENST00000380180 CLASP1Q7Z460 1538 aa29.39■■■□□ 2.3
PDLIM5-205ENST00000380180 PTPRKQ15262 1439 aa29.38■■■□□ 2.29
PDLIM5-205ENST00000380180 ERCC6L2Q5T890 1561 aa29.36■■■□□ 2.29
PDLIM5-205ENST00000380180 ATP10BO94823 1461 aa29.36■■■□□ 2.29
PDLIM5-205ENST00000380180 ADCY10Q96PN6 1610 aa29.33■■■□□ 2.29
PDLIM5-205ENST00000380180 KIF14Q15058 1648 aa29.31■■■□□ 2.28
PDLIM5-205ENST00000380180 PLEKHD1A6NEE1 506 aa29.28■■■□□ 2.28
PDLIM5-205ENST00000380180 UACAQ9BZF9 1416 aa29.27■■■□□ 2.28
PDLIM5-205ENST00000380180 HFM1A2PYH4 1435 aa29.25■■■□□ 2.27
PDLIM5-205ENST00000380180 ITSN2Q9NZM3 1697 aa29.25■■■□□ 2.27
PDLIM5-205ENST00000380180 NAIPQ13075 1403 aa29.2■■■□□ 2.26
PDLIM5-205ENST00000380180 GPATCH8Q9UKJ3 1502 aaKnown RBP29.19■■■□□ 2.26
PDLIM5-205ENST00000380180 MAPKBP1O60336 1514 aa29.19■■■□□ 2.26
PDLIM5-205ENST00000380180 ZNF644Q9H582 1327 aaPredicted RBP29.18■■■□□ 2.26
PDLIM5-205ENST00000380180 CHIC2Q9UKJ5 165 aa29.17■■■□□ 2.26
PDLIM5-205ENST00000380180 CDC42BPAQ5VT25 1732 aa29.16■■■□□ 2.26
PDLIM5-205ENST00000380180 ABCC2Q92887 1545 aa29.15■■■□□ 2.26
PDLIM5-205ENST00000380180 CFDP1Q9UEE9 299 aaPredicted RBP29.15■■■□□ 2.26
PDLIM5-205ENST00000380180 DNMT1P26358 1616 aaKnown RBP29.15■■■□□ 2.26
PDLIM5-205ENST00000380180 GCC2Q8IWJ2 1684 aa29.13■■■□□ 2.25
PDLIM5-205ENST00000380180 ABCC10Q5T3U5 1492 aa29.13■■■□□ 2.25
PDLIM5-205ENST00000380180 RRP7BPQ9NSQ0 103 aa29.12■■■□□ 2.25
PDLIM5-205ENST00000380180 DAPK1P53355 1430 aa29.12■■■□□ 2.25
PDLIM5-205ENST00000380180 CAMSAP2Q08AD1 1489 aa29.1■■■□□ 2.25
PDLIM5-205ENST00000380180 AKNAQ7Z591 1439 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms