RNA–Protein interactions for RNA: ENST00000341491.8

ATF3-202, Transcript of activating transcription factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATF3, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-202ENST00000341491 ARHGAP35Q9NRY4 1499 aa21.56■■□□□ 1.04
ATF3-202ENST00000341491 P3H3Q8IVL6 736 aa21.55■■□□□ 1.04
ATF3-202ENST00000341491 VPS8Q8N3P4 1428 aa21.51■■□□□ 1.03
ATF3-202ENST00000341491 FHAD1B1AJZ9 1412 aa21.5■■□□□ 1.03
ATF3-202ENST00000341491 FBLN2P98095 1184 aa21.44■■□□□ 1.02
ATF3-202ENST00000341491 FHOD3Q2V2M9 1422 aa21.44■■□□□ 1.02
ATF3-202ENST00000341491 TRIM26Q12899 539 aaPredicted RBP21.42■■□□□ 1.02
ATF3-202ENST00000341491 GRIN2AQ12879 1464 aa21.38■■□□□ 1.01
ATF3-202ENST00000341491 MAGI1Q96QZ7 1491 aaPredicted RBP21.37■■□□□ 1.01
ATF3-202ENST00000341491 IQGAP2Q13576 1575 aa21.35■■□□□ 1.01
ATF3-202ENST00000341491 CHMP7Q8WUX9 453 aaPredicted RBP21.34■■□□□ 1.01
ATF3-202ENST00000341491 CEP170Q5SW79 1584 aa21.34■■□□□ 1.01
ATF3-202ENST00000341491 PCF11O94913 1555 aaKnown RBP21.33■■□□□ 1.01
ATF3-202ENST00000341491 SYNJ2O15056 1496 aa21.33■■□□□ 1.01
ATF3-202ENST00000341491 SAMD9Q5K651 1589 aa21.31■■□□□ 1
ATF3-202ENST00000341491 CHD1O14646 1710 aa21.3■■□□□ 1
ATF3-202ENST00000341491 ATP1B4Q9UN42 357 aaPredicted RBP21.29■■□□□ 1
ATF3-202ENST00000341491 EFCAB5A4FU69 1503 aa21.29■■□□□ 1
ATF3-202ENST00000341491 APLP2Q06481 763 aa21.28■■□□□ 1
ATF3-202ENST00000341491 KANK4Q5T7N3 995 aaPredicted RBP21.27■■□□□ 1
ATF3-202ENST00000341491 LRRIQ1Q96JM4 1722 aa21.21■□□□□ 0.99
ATF3-202ENST00000341491 KIAA0586Q9BVV6 1533 aa21.2■□□□□ 0.98
ATF3-202ENST00000341491 TIAM1Q13009 1591 aa21.16■□□□□ 0.98
ATF3-202ENST00000341491 NUP160Q12769 1436 aa21.16■□□□□ 0.98
ATF3-202ENST00000341491 UGGT2Q9NYU1 1516 aa21.16■□□□□ 0.98
ATF3-202ENST00000341491 KIAA0556O60303 1618 aa21.15■□□□□ 0.98
ATF3-202ENST00000341491 DISP1Q96F81 1524 aa21.15■□□□□ 0.98
ATF3-202ENST00000341491 ARID3CA6NKF2 412 aa21.15■□□□□ 0.98
ATF3-202ENST00000341491 CFAP43Q8NDM7 1665 aa21.14■□□□□ 0.97
ATF3-202ENST00000341491 FYCO1Q9BQS8 1478 aa21.11■□□□□ 0.97
ATF3-202ENST00000341491 FMN1Q68DA7 1419 aa21.1■□□□□ 0.97
ATF3-202ENST00000341491 CASKIN1Q8WXD9 1431 aa21.1■□□□□ 0.97
ATF3-202ENST00000341491 JPH4Q96JJ6 628 aa21.05■□□□□ 0.96
ATF3-202ENST00000341491 LRRC9Q6ZRR7 1453 aa21.04■□□□□ 0.96
ATF3-202ENST00000341491 CDK13Q14004 1512 aaKnown RBP21.02■□□□□ 0.96
ATF3-202ENST00000341491 HNRNPUL2Q1KMD3 747 aaKnown RBP21■□□□□ 0.95
ATF3-202ENST00000341491 ERCC6L2Q5T890 1561 aa20.99■□□□□ 0.95
ATF3-202ENST00000341491 HECW1Q76N89 1606 aa20.98■□□□□ 0.95
ATF3-202ENST00000341491 MAP3K1Q13233 1512 aa20.97■□□□□ 0.95
ATF3-202ENST00000341491 MAGI3Q5TCQ9 1506 aa20.97■□□□□ 0.95
ATF3-202ENST00000341491 PRG4Q92954 1404 aaPredicted RBP20.96■□□□□ 0.95
ATF3-202ENST00000341491 PLB1Q6P1J6 1458 aa20.96■□□□□ 0.95
ATF3-202ENST00000341491 RAPGEF6Q8TEU7 1601 aa20.95■□□□□ 0.94
ATF3-202ENST00000341491 PHLDB1Q86UU1 1377 aa20.94■□□□□ 0.94
ATF3-202ENST00000341491 EPRSP07814 1512 aaKnown RBP20.92■□□□□ 0.94
ATF3-202ENST00000341491 CARMIL2Q6F5E8 1435 aa20.92■□□□□ 0.94
ATF3-202ENST00000341491 NUP153P49790 1475 aaKnown RBP20.9■□□□□ 0.94
ATF3-202ENST00000341491 SHROOM2Q13796 1616 aa20.9■□□□□ 0.94
ATF3-202ENST00000341491 MTUS2Q5JR59 1369 aa20.9■□□□□ 0.94
ATF3-202ENST00000341491 CLASP1Q7Z460 1538 aa20.89■□□□□ 0.94
ATF3-202ENST00000341491 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
ATF3-202ENST00000341491 HRCP23327 699 aa20.88■□□□□ 0.93
ATF3-202ENST00000341491 ITGAEP38570 1179 aa20.88■□□□□ 0.93
ATF3-202ENST00000341491 CCDC18Q5T9S5 1454 aa20.85■□□□□ 0.93
ATF3-202ENST00000341491 RRBP1Q9P2E9 1410 aaKnown RBP20.84■□□□□ 0.93
ATF3-202ENST00000341491 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
ATF3-202ENST00000341491 EHBP1L1Q8N3D4 1523 aa20.81■□□□□ 0.92
ATF3-202ENST00000341491 SUPT6HQ7KZ85 1726 aaKnown RBP20.81■□□□□ 0.92
ATF3-202ENST00000341491 NCOA2Q15596 1464 aa20.8■□□□□ 0.92
ATF3-202ENST00000341491 ABCA8O94911 1581 aa20.8■□□□□ 0.92
ATF3-202ENST00000341491 FAM50AQ14320 339 aaKnown RBP20.79■□□□□ 0.92
ATF3-202ENST00000341491 PTPRGP23470 1445 aa20.78■□□□□ 0.92
ATF3-202ENST00000341491 KIF14Q15058 1648 aa20.72■□□□□ 0.91
ATF3-202ENST00000341491 FGD6Q6ZV73 1430 aa20.7■□□□□ 0.9
ATF3-202ENST00000341491 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
ATF3-202ENST00000341491 ARHGEF11O15085 1522 aa20.69■□□□□ 0.9
ATF3-202ENST00000341491 ATP10BO94823 1461 aa20.69■□□□□ 0.9
ATF3-202ENST00000341491 MYOM3Q5VTT5 1437 aa20.67■□□□□ 0.9
ATF3-202ENST00000341491 UACAQ9BZF9 1416 aa20.65■□□□□ 0.9
ATF3-202ENST00000341491 PTPN23Q9H3S7 1636 aa20.65■□□□□ 0.9
ATF3-202ENST00000341491 OSCARQ8IYS5 282 aa20.63■□□□□ 0.89
ATF3-202ENST00000341491 TROQ12816 1431 aaPredicted RBP20.62■□□□□ 0.89
ATF3-202ENST00000341491 ABCC2Q92887 1545 aa20.6■□□□□ 0.89
ATF3-202ENST00000341491 PTPRKQ15262 1439 aa20.57■□□□□ 0.88
ATF3-202ENST00000341491 ADCY10Q96PN6 1610 aa20.57■□□□□ 0.88
ATF3-202ENST00000341491 CDK11AQ9UQ88 783 aaPredicted RBP20.57■□□□□ 0.88
ATF3-202ENST00000341491 ZNF644Q9H582 1327 aaPredicted RBP20.57■□□□□ 0.88
ATF3-202ENST00000341491 ZCCHC11Q5TAX3 1644 aaKnown RBP20.57■□□□□ 0.88
ATF3-202ENST00000341491 CDC42BPAQ5VT25 1732 aa20.54■□□□□ 0.88
ATF3-202ENST00000341491 PLEKHD1A6NEE1 506 aa20.53■□□□□ 0.88
ATF3-202ENST00000341491 CHIC2Q9UKJ5 165 aa20.51■□□□□ 0.87
ATF3-202ENST00000341491 ZNF777Q9ULD5 760 aaPredicted RBP20.5■□□□□ 0.87
ATF3-202ENST00000341491 RAB3GAP2Q9H2M9 1393 aa20.5■□□□□ 0.87
ATF3-202ENST00000341491 ITSN2Q9NZM3 1697 aa20.48■□□□□ 0.87
ATF3-202ENST00000341491 GPATCH8Q9UKJ3 1502 aaKnown RBP20.48■□□□□ 0.87
ATF3-202ENST00000341491 TCOF1Q13428 1488 aaKnown RBP20.48■□□□□ 0.87
ATF3-202ENST00000341491 TTC37Q6PGP7 1564 aa20.48■□□□□ 0.87
ATF3-202ENST00000341491 KCNH8Q96L42 1107 aa20.48■□□□□ 0.87
ATF3-202ENST00000341491 ABCC10Q5T3U5 1492 aa20.47■□□□□ 0.87
ATF3-202ENST00000341491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.45■□□□□ 0.866e-7■□□□□ 11.3
ATF3-202ENST00000341491 CAMSAP2Q08AD1 1489 aa20.44■□□□□ 0.86
ATF3-202ENST00000341491 CFDP1Q9UEE9 299 aaPredicted RBP20.44■□□□□ 0.86
ATF3-202ENST00000341491 MIA2Q96PC5 1412 aa20.43■□□□□ 0.86
ATF3-202ENST00000341491 UHRF1BP1LA0JNW5 1464 aa20.43■□□□□ 0.86
ATF3-202ENST00000341491 KDM5BQ9UGL1 1544 aa20.43■□□□□ 0.86
ATF3-202ENST00000341491 DHX57Q6P158 1386 aaKnown RBP20.43■□□□□ 0.86
ATF3-202ENST00000341491 SETD5Q9C0A6 1442 aa20.43■□□□□ 0.86
ATF3-202ENST00000341491 CDC42BPBQ9Y5S2 1711 aa20.43■□□□□ 0.86
ATF3-202ENST00000341491 RRP7BPQ9NSQ0 103 aa20.43■□□□□ 0.86
ATF3-202ENST00000341491 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.41■□□□□ 0.861e-6■■■■□ 23.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms