RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 ARHGAP35Q9NRY4 1499 aa18.47■□□□□ 0.55
SSRP1-201ENST00000278412 ADAMTS12P58397 1594 aa18.47■□□□□ 0.55
SSRP1-201ENST00000278412 FHAD1B1AJZ9 1412 aa18.43■□□□□ 0.54
SSRP1-201ENST00000278412 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.54
SSRP1-201ENST00000278412 CTTNBP2Q8WZ74 1663 aa18.38■□□□□ 0.53
SSRP1-201ENST00000278412 FHOD3Q2V2M9 1422 aa18.38■□□□□ 0.53
SSRP1-201ENST00000278412 CHMP7Q8WUX9 453 aaPredicted RBP18.36■□□□□ 0.53
SSRP1-201ENST00000278412 GRIN2AQ12879 1464 aa18.33■□□□□ 0.53
SSRP1-201ENST00000278412 MAGI1Q96QZ7 1491 aaPredicted RBP18.3■□□□□ 0.52
SSRP1-201ENST00000278412 TRIM26Q12899 539 aaPredicted RBP18.3■□□□□ 0.52
SSRP1-201ENST00000278412 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
SSRP1-201ENST00000278412 SYNJ2O15056 1496 aa18.29■□□□□ 0.52
SSRP1-201ENST00000278412 KANK4Q5T7N3 995 aaPredicted RBP18.29■□□□□ 0.52
SSRP1-201ENST00000278412 CEP170Q5SW79 1584 aa18.29■□□□□ 0.52
SSRP1-201ENST00000278412 IQGAP2Q13576 1575 aa18.25■□□□□ 0.51
SSRP1-201ENST00000278412 ARID3CA6NKF2 412 aa18.23■□□□□ 0.51
SSRP1-201ENST00000278412 PCF11O94913 1555 aaKnown RBP18.21■□□□□ 0.51
SSRP1-201ENST00000278412 CHD1O14646 1710 aa18.2■□□□□ 0.5
SSRP1-201ENST00000278412 SAMD9Q5K651 1589 aa18.2■□□□□ 0.5
SSRP1-201ENST00000278412 APLP2Q06481 763 aa18.19■□□□□ 0.5
SSRP1-201ENST00000278412 KIAA0586Q9BVV6 1533 aa18.18■□□□□ 0.5
SSRP1-201ENST00000278412 EFCAB5A4FU69 1503 aa18.17■□□□□ 0.5
SSRP1-201ENST00000278412 NUP160Q12769 1436 aa18.16■□□□□ 0.5
SSRP1-201ENST00000278412 DISP1Q96F81 1524 aa18.15■□□□□ 0.5
SSRP1-201ENST00000278412 JPH4Q96JJ6 628 aa18.13■□□□□ 0.49
SSRP1-201ENST00000278412 UGGT2Q9NYU1 1516 aa18.11■□□□□ 0.49
SSRP1-201ENST00000278412 LRRIQ1Q96JM4 1722 aa18.1■□□□□ 0.49
SSRP1-201ENST00000278412 KIAA0556O60303 1618 aa18.08■□□□□ 0.49
SSRP1-201ENST00000278412 TIAM1Q13009 1591 aa18.06■□□□□ 0.48
SSRP1-201ENST00000278412 CASKIN1Q8WXD9 1431 aa18.06■□□□□ 0.48
SSRP1-201ENST00000278412 FMN1Q68DA7 1419 aa18.05■□□□□ 0.48
SSRP1-201ENST00000278412 ERCC6L2Q5T890 1561 aa18.05■□□□□ 0.48
SSRP1-201ENST00000278412 FYCO1Q9BQS8 1478 aa18.03■□□□□ 0.48
SSRP1-201ENST00000278412 PRG4Q92954 1404 aaPredicted RBP18.01■□□□□ 0.47
SSRP1-201ENST00000278412 PLB1Q6P1J6 1458 aa18.01■□□□□ 0.47
SSRP1-201ENST00000278412 CDK13Q14004 1512 aaKnown RBP18.01■□□□□ 0.47
SSRP1-201ENST00000278412 HNRNPUL2Q1KMD3 747 aaKnown RBP18■□□□□ 0.47
SSRP1-201ENST00000278412 LRRC9Q6ZRR7 1453 aa18■□□□□ 0.47
SSRP1-201ENST00000278412 CFAP43Q8NDM7 1665 aa17.97■□□□□ 0.47
SSRP1-201ENST00000278412 MAGI3Q5TCQ9 1506 aa17.97■□□□□ 0.47
SSRP1-201ENST00000278412 PHLDB1Q86UU1 1377 aa17.96■□□□□ 0.47
SSRP1-201ENST00000278412 ITGAEP38570 1179 aa17.93■□□□□ 0.46
SSRP1-201ENST00000278412 NUP153P49790 1475 aaKnown RBP17.93■□□□□ 0.46
SSRP1-201ENST00000278412 EPRSP07814 1512 aaKnown RBP17.92■□□□□ 0.46
SSRP1-201ENST00000278412 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.92■□□□□ 0.46
SSRP1-201ENST00000278412 CARMIL2Q6F5E8 1435 aa17.91■□□□□ 0.46
SSRP1-201ENST00000278412 CLASP1Q7Z460 1538 aa17.9■□□□□ 0.46
SSRP1-201ENST00000278412 MAP3K1Q13233 1512 aa17.9■□□□□ 0.46
SSRP1-201ENST00000278412 MTUS2Q5JR59 1369 aa17.9■□□□□ 0.46
SSRP1-201ENST00000278412 RAPGEF6Q8TEU7 1601 aa17.89■□□□□ 0.45
SSRP1-201ENST00000278412 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
SSRP1-201ENST00000278412 HECW1Q76N89 1606 aa17.88■□□□□ 0.45
SSRP1-201ENST00000278412 PTPRGP23470 1445 aa17.86■□□□□ 0.45
SSRP1-201ENST00000278412 FAM50AQ14320 339 aaKnown RBP17.83■□□□□ 0.44
SSRP1-201ENST00000278412 CCNB3Q8WWL7 1395 aa17.82■□□□□ 0.44
SSRP1-201ENST00000278412 RRBP1Q9P2E9 1410 aaKnown RBP17.81■□□□□ 0.44
SSRP1-201ENST00000278412 NCOA2Q15596 1464 aa17.81■□□□□ 0.44
SSRP1-201ENST00000278412 HRCP23327 699 aa17.8■□□□□ 0.44
SSRP1-201ENST00000278412 ABCA8O94911 1581 aa17.8■□□□□ 0.44
SSRP1-201ENST00000278412 OSCARQ8IYS5 282 aa17.8■□□□□ 0.44
SSRP1-201ENST00000278412 CCDC18Q5T9S5 1454 aa17.79■□□□□ 0.44
SSRP1-201ENST00000278412 ATP10BO94823 1461 aa17.77■□□□□ 0.44
SSRP1-201ENST00000278412 EHBP1L1Q8N3D4 1523 aa17.75■□□□□ 0.43
SSRP1-201ENST00000278412 KIF14Q15058 1648 aa17.73■□□□□ 0.43
SSRP1-201ENST00000278412 SUPT6HQ7KZ85 1726 aaKnown RBP17.72■□□□□ 0.43
SSRP1-201ENST00000278412 UACAQ9BZF9 1416 aa17.72■□□□□ 0.43
SSRP1-201ENST00000278412 FGD6Q6ZV73 1430 aa17.72■□□□□ 0.43
SSRP1-201ENST00000278412 ZNF644Q9H582 1327 aaPredicted RBP17.71■□□□□ 0.43
SSRP1-201ENST00000278412 ARHGEF11O15085 1522 aa17.69■□□□□ 0.42
SSRP1-201ENST00000278412 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
SSRP1-201ENST00000278412 MYOM3Q5VTT5 1437 aa17.69■□□□□ 0.42
SSRP1-201ENST00000278412 PTPRKQ15262 1439 aa17.67■□□□□ 0.42
SSRP1-201ENST00000278412 TROQ12816 1431 aaPredicted RBP17.66■□□□□ 0.42
SSRP1-201ENST00000278412 PLEKHD1A6NEE1 506 aa17.64■□□□□ 0.41
SSRP1-201ENST00000278412 KCNH8Q96L42 1107 aa17.64■□□□□ 0.41
SSRP1-201ENST00000278412 ABCC2Q92887 1545 aa17.64■□□□□ 0.41
SSRP1-201ENST00000278412 CDK11AQ9UQ88 783 aaPredicted RBP17.63■□□□□ 0.41
SSRP1-201ENST00000278412 CHIC2Q9UKJ5 165 aa17.62■□□□□ 0.41
SSRP1-201ENST00000278412 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
SSRP1-201ENST00000278412 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
SSRP1-201ENST00000278412 ADCY10Q96PN6 1610 aa17.61■□□□□ 0.41
SSRP1-201ENST00000278412 ZCCHC11Q5TAX3 1644 aaKnown RBP17.58■□□□□ 0.4
SSRP1-201ENST00000278412 GPATCH8Q9UKJ3 1502 aaKnown RBP17.57■□□□□ 0.4
SSRP1-201ENST00000278412 CFDP1Q9UEE9 299 aaPredicted RBP17.55■□□□□ 0.4
SSRP1-201ENST00000278412 ABCC10Q5T3U5 1492 aa17.55■□□□□ 0.4
SSRP1-201ENST00000278412 RAB3GAP2Q9H2M9 1393 aa17.55■□□□□ 0.4
SSRP1-201ENST00000278412 RRP7BPQ9NSQ0 103 aa17.55■□□□□ 0.4
SSRP1-201ENST00000278412 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
SSRP1-201ENST00000278412 TTC37Q6PGP7 1564 aa17.53■□□□□ 0.4
SSRP1-201ENST00000278412 KDM5BQ9UGL1 1544 aa17.52■□□□□ 0.4
SSRP1-201ENST00000278412 CDC42BPAQ5VT25 1732 aa17.52■□□□□ 0.4
SSRP1-201ENST00000278412 UHRF1BP1LA0JNW5 1464 aa17.51■□□□□ 0.39
SSRP1-201ENST00000278412 TCOF1Q13428 1488 aaKnown RBP17.51■□□□□ 0.39
SSRP1-201ENST00000278412 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.49■□□□□ 0.397e-7■□□□□ 11
SSRP1-201ENST00000278412 CAMSAP2Q08AD1 1489 aa17.49■□□□□ 0.39
SSRP1-201ENST00000278412 MIA2Q96PC5 1412 aa17.48■□□□□ 0.39
SSRP1-201ENST00000278412 DHX57Q6P158 1386 aaKnown RBP17.48■□□□□ 0.39
SSRP1-201ENST00000278412 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.47■□□□□ 0.39
SSRP1-201ENST00000278412 SETD5Q9C0A6 1442 aa17.47■□□□□ 0.39
SSRP1-201ENST00000278412 HNRNPMP52272 730 aaKnown RBP eCLIP17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms