RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Ythdc1E9Q5K9 736 aaKnown RBP22.79■■□□□ 1.24
Ptpre-207ENSMUST00000211140 Vsig10D3YX43 558 aa22.77■■□□□ 1.24
Ptpre-207ENSMUST00000211140 Lmod3E9QA62 571 aa22.75■■□□□ 1.23
Ptpre-207ENSMUST00000211140 1700123L14RikQ3V2K7 440 aa22.74■■□□□ 1.23
Ptpre-207ENSMUST00000211140 CanxP35564 591 aaKnown RBP22.72■■□□□ 1.23
Ptpre-207ENSMUST00000211140 Fam71e1A1L3C1 212 aa22.71■■□□□ 1.23
Ptpre-207ENSMUST00000211140 Aebp2Q9Z248 504 aaKnown RBP22.69■■□□□ 1.22
Ptpre-207ENSMUST00000211140 Hsp90ab1P11499 724 aaKnown RBP22.68■■□□□ 1.22
Ptpre-207ENSMUST00000211140 Rb1cc1Q9ESK9 1588 aa22.68■■□□□ 1.22
Ptpre-207ENSMUST00000211140 Clstn2Q9ER65 966 aa22.66■■□□□ 1.22
Ptpre-207ENSMUST00000211140 Trim44Q9QXA7 346 aa22.66■■□□□ 1.22
Ptpre-207ENSMUST00000211140 Trim26Q99PN3 545 aa22.65■■□□□ 1.22
Ptpre-207ENSMUST00000211140 Fgd1P52734 960 aa22.65■■□□□ 1.22
Ptpre-207ENSMUST00000211140 Trim30dE9PWL0 497 aa22.64■■□□□ 1.22
Ptpre-207ENSMUST00000211140 Plppr3Q7TPB0 716 aa22.6■■□□□ 1.21
Ptpre-207ENSMUST00000211140 Ofd1Q80Z25 1017 aa22.6■■□□□ 1.21
Ptpre-207ENSMUST00000211140 Setd5Q5XJV7 1441 aa22.6■■□□□ 1.21
Ptpre-207ENSMUST00000211140 P3h3Q8CG70 732 aa22.59■■□□□ 1.21
Ptpre-207ENSMUST00000211140 Rgl3Q3UYI5 709 aa22.59■■□□□ 1.21
Ptpre-207ENSMUST00000211140 Ubl4bQ9CQ84 188 aa22.59■■□□□ 1.21
Ptpre-207ENSMUST00000211140 Arid4bA2CG63 1314 aaKnown RBP22.49■■□□□ 1.19
Ptpre-207ENSMUST00000211140 Ccdc27Q3V036 639 aa22.46■■□□□ 1.19
Ptpre-207ENSMUST00000211140 PtmaP26350 111 aa22.46■■□□□ 1.19
Ptpre-207ENSMUST00000211140 Apbb1Q9QXJ1 710 aa22.42■■□□□ 1.18
Ptpre-207ENSMUST00000211140 Plcb2A3KGF7 1181 aa22.4■■□□□ 1.18
Ptpre-207ENSMUST00000211140 Htatsf1Q8BGC0 757 aa22.4■■□□□ 1.18
Ptpre-207ENSMUST00000211140 Grwd1Q810D6 446 aaKnown RBP22.37■■□□□ 1.17
Ptpre-207ENSMUST00000211140 Card11Q8CIS0 1159 aa22.34■■□□□ 1.17
Ptpre-207ENSMUST00000211140 Ppm1gQ61074 542 aa22.31■■□□□ 1.16
Ptpre-207ENSMUST00000211140 Kdm2aP59997 1161 aa22.31■■□□□ 1.16
Ptpre-207ENSMUST00000211140 Irx6Q9ER75 438 aa22.31■■□□□ 1.16
Ptpre-207ENSMUST00000211140 Neurod2Q62414 383 aa22.31■■□□□ 1.16
Ptpre-207ENSMUST00000211140 Cwc22Q8C5N3 908 aaKnown RBP22.27■■□□□ 1.16
Ptpre-207ENSMUST00000211140 Safb2Q80YR5 991 aaKnown RBP22.27■■□□□ 1.16
Ptpre-207ENSMUST00000211140 Eea1Q8BL66 1411 aa22.27■■□□□ 1.16
Ptpre-207ENSMUST00000211140 Golga3P55937 1487 aa22.27■■□□□ 1.16
Ptpre-207ENSMUST00000211140 Dbr1Q923B1 550 aa22.27■■□□□ 1.15
Ptpre-207ENSMUST00000211140 IqubQ8CDK3 788 aa22.26■■□□□ 1.15
Ptpre-207ENSMUST00000211140 SafbD3YXK2 937 aaKnown RBP22.26■■□□□ 1.15
Ptpre-207ENSMUST00000211140 Srpk2O54781 681 aaKnown RBP22.22■■□□□ 1.15
Ptpre-207ENSMUST00000211140 Mroh3A0A1D5RM54 893 aa22.21■■□□□ 1.15
Ptpre-207ENSMUST00000211140 Mapk8ip3Q9ESN9 1337 aa22.2■■□□□ 1.14
Ptpre-207ENSMUST00000211140 B4galnt3Q6L8S8 986 aa22.18■■□□□ 1.14
Ptpre-207ENSMUST00000211140 Armcx1Q9CX83 456 aa22.17■■□□□ 1.14
Ptpre-207ENSMUST00000211140 Exosc9Q9JHI7 438 aaKnown RBP22.17■■□□□ 1.14
Ptpre-207ENSMUST00000211140 Gm20521D3Z5F7 333 aa22.16■■□□□ 1.14
Ptpre-207ENSMUST00000211140 Bcl11aQ9QYE3 773 aa22.16■■□□□ 1.14
Ptpre-207ENSMUST00000211140 Spryd3E9Q9B3 442 aa22.15■■□□□ 1.14
Ptpre-207ENSMUST00000211140 Map7O88735 730 aa22.15■■□□□ 1.14
Ptpre-207ENSMUST00000211140 Kif15Q6P9L6 1387 aa22.14■■□□□ 1.13
Ptpre-207ENSMUST00000211140 Gm6268A2A3U9 297 aa22.12■■□□□ 1.13
Ptpre-207ENSMUST00000211140 Irx3P81067 507 aa22.11■■□□□ 1.13
Ptpre-207ENSMUST00000211140 Rsf1E9PWW9 1441 aaKnown RBP22.11■■□□□ 1.13
Ptpre-207ENSMUST00000211140 Slc4a3P16283 1227 aa22.1■■□□□ 1.13
Ptpre-207ENSMUST00000211140 Chmp4bQ9D8B3 224 aaKnown RBP22.08■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Mtus2Q3UHD3 1353 aa22.07■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Casc1Q6TDU8 730 aa22.06■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Mia2Q91ZV0 1396 aa22.06■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Wwc2Q6NXJ0 1187 aa22.04■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Znf326O88291 580 aa22.04■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Baz1aO88379 1555 aa22.04■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Arhgap27A2AB59 869 aa22.03■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Mbd3Q9Z2D8 285 aaKnown RBP22.03■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Rrp7aQ9D1C9 280 aaKnown RBP22.03■■□□□ 1.12
Ptpre-207ENSMUST00000211140 Hspa5P20029 655 aaKnown RBP22.02■■□□□ 1.12
Ptpre-207ENSMUST00000211140 NudcO35685 332 aaKnown RBP22.01■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Ccdc18Q640L5 1455 aa22.01■■□□□ 1.11
Ptpre-207ENSMUST00000211140 NacadQ5SWP3 1504 aa22.01■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Rwdd1Q9CQK7 243 aa22■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Tcerg1Q8CGF7 1100 aaKnown RBP21.99■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Stag3O70576 1240 aa21.99■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Supt16hQ920B9 1047 aa21.98■■□□□ 1.11
Ptpre-207ENSMUST00000211140 PnnO35691 725 aaKnown RBP21.98■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Adam1bQ8R534 806 aa21.97■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Hsp90b1P08113 802 aaKnown RBP21.97■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Stk24Q99KH8 431 aa21.97■■□□□ 1.11
Ptpre-207ENSMUST00000211140 1700019A02RikA0A087WPV9 146 aa21.96■■□□□ 1.11
Ptpre-207ENSMUST00000211140 KnstrnQ9D9Z1 312 aaKnown RBP21.96■■□□□ 1.11
Ptpre-207ENSMUST00000211140 Pes1Q9EQ61 584 aaKnown RBP21.94■■□□□ 1.1
Ptpre-207ENSMUST00000211140 Iqcf3Q9D498 203 aa21.94■■□□□ 1.1
Ptpre-207ENSMUST00000211140 Dnttip2Q8R2M2 758 aaKnown RBP21.93■■□□□ 1.1
Ptpre-207ENSMUST00000211140 AU015836B2RUM3 263 aa21.93■■□□□ 1.1
Ptpre-207ENSMUST00000211140 Cnga1P29974 684 aa21.93■■□□□ 1.1
Ptpre-207ENSMUST00000211140 Rtn4Q99P72 1162 aaKnown RBP21.91■■□□□ 1.1
Ptpre-207ENSMUST00000211140 Erich6bQ9D4S6 220 aa21.9■■□□□ 1.1
Ptpre-207ENSMUST00000211140 NgefQ8CHT1 710 aa21.89■■□□□ 1.1
Ptpre-207ENSMUST00000211140 Chmp5Q9D7S9 219 aa21.88■■□□□ 1.09
Ptpre-207ENSMUST00000211140 Dnai1Q8C0M8 701 aa21.88■■□□□ 1.09
Ptpre-207ENSMUST00000211140 MccE9PWI3 1003 aa21.87■■□□□ 1.09
Ptpre-207ENSMUST00000211140 Exoc6Q8R313 802 aa21.86■■□□□ 1.09
Ptpre-207ENSMUST00000211140 Rundc1Q0VDN7 615 aa21.84■■□□□ 1.09
Ptpre-207ENSMUST00000211140 Speer4f1Q9D5Q6 258 aa21.83■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Clstn1Q9EPL2 979 aa21.83■■□□□ 1.08
Ptpre-207ENSMUST00000211140 EspnQ9ET47 871 aa21.82■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Ipo9Q91YE6 1041 aa21.82■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Fhad1A6PWD2 1420 aa21.81■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Tnnt2P50752 301 aa21.81■■□□□ 1.08
Ptpre-207ENSMUST00000211140 HnrnpuQ8VEK3 800 aaKnown RBP21.81■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Ercc6F8VPZ5 1481 aa21.8■■□□□ 1.08
Ptpre-207ENSMUST00000211140 Pkd2O35245 966 aa21.8■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms