RNA–Protein interactions for RNA: ENSMUST00000159592.7

Ssh1-204, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ssh1, Length 8,436 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-204ENSMUST00000159592 Gm13697A2AK42 830 aa17.98■□□□□ 0.47
Ssh1-204ENSMUST00000159592 SafbD3YXK2 937 aaKnown RBP17.98■□□□□ 0.47
Ssh1-204ENSMUST00000159592 Bcl11aQ9QYE3 773 aa17.96■□□□□ 0.46
Ssh1-204ENSMUST00000159592 Ythdc1E9Q5K9 736 aaKnown RBP17.95■□□□□ 0.46
Ssh1-204ENSMUST00000159592 CanxP35564 591 aaKnown RBP17.95■□□□□ 0.46
Ssh1-204ENSMUST00000159592 DekQ7TNV0 380 aaKnown RBP17.95■□□□□ 0.46
Ssh1-204ENSMUST00000159592 Vsig10D3YX43 558 aa17.93■□□□□ 0.46
Ssh1-204ENSMUST00000159592 Lmod3E9QA62 571 aa17.91■□□□□ 0.46
Ssh1-204ENSMUST00000159592 Hdac5Q9Z2V6 1113 aa17.9■□□□□ 0.46
Ssh1-204ENSMUST00000159592 Setd5Q5XJV7 1441 aa17.9■□□□□ 0.46
Ssh1-204ENSMUST00000159592 Ofd1Q80Z25 1017 aa17.89■□□□□ 0.45
Ssh1-204ENSMUST00000159592 Ccdc27Q3V036 639 aa17.88■□□□□ 0.45
Ssh1-204ENSMUST00000159592 Trim30dE9PWL0 497 aa17.87■□□□□ 0.45
Ssh1-204ENSMUST00000159592 Hsp90ab1P11499 724 aaKnown RBP17.87■□□□□ 0.45
Ssh1-204ENSMUST00000159592 Baz1aO88379 1555 aa17.86■□□□□ 0.45
Ssh1-204ENSMUST00000159592 Trim26Q99PN3 545 aa17.83■□□□□ 0.44
Ssh1-204ENSMUST00000159592 Trim44Q9QXA7 346 aa17.83■□□□□ 0.44
Ssh1-204ENSMUST00000159592 CatipB9EKE5 520 aa17.82■□□□□ 0.44
Ssh1-204ENSMUST00000159592 Rgl3Q3UYI5 709 aa17.82■□□□□ 0.44
Ssh1-204ENSMUST00000159592 Golga3P55937 1487 aa17.8■□□□□ 0.44
Ssh1-204ENSMUST00000159592 Rsf1E9PWW9 1441 aaKnown RBP17.77■□□□□ 0.44
Ssh1-204ENSMUST00000159592 Gm13695A2AK44 830 aa17.76■□□□□ 0.43
Ssh1-204ENSMUST00000159592 Arid4bA2CG63 1314 aaKnown RBP17.76■□□□□ 0.43
Ssh1-204ENSMUST00000159592 Apbb1Q9QXJ1 710 aa17.73■□□□□ 0.43
Ssh1-204ENSMUST00000159592 Slc4a3P16283 1227 aa17.72■□□□□ 0.43
Ssh1-204ENSMUST00000159592 Eea1Q8BL66 1411 aa17.71■□□□□ 0.43
Ssh1-204ENSMUST00000159592 Ubl4bQ9CQ84 188 aa17.69■□□□□ 0.42
Ssh1-204ENSMUST00000159592 Grwd1Q810D6 446 aaKnown RBP17.68■□□□□ 0.42
Ssh1-204ENSMUST00000159592 Dbr1Q923B1 550 aa17.67■□□□□ 0.42
Ssh1-204ENSMUST00000159592 NacadQ5SWP3 1504 aa17.65■□□□□ 0.42
Ssh1-204ENSMUST00000159592 Htatsf1Q8BGC0 757 aa17.64■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Plcb2A3KGF7 1181 aa17.62■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Fgd1P52734 960 aa17.62■□□□□ 0.41
Ssh1-204ENSMUST00000159592 B4galnt3Q6L8S8 986 aa17.62■□□□□ 0.41
Ssh1-204ENSMUST00000159592 PtmaP26350 111 aa17.62■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Card11Q8CIS0 1159 aa17.62■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Spryd3E9Q9B3 442 aa17.61■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Clstn2Q9ER65 966 aa17.61■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Irx3P81067 507 aa17.61■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Neurod2Q62414 383 aa17.6■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Wwc2Q6NXJ0 1187 aa17.59■□□□□ 0.41
Ssh1-204ENSMUST00000159592 Ppm1gQ61074 542 aa17.58■□□□□ 0.4
Ssh1-204ENSMUST00000159592 Hspa5P20029 655 aaKnown RBP17.57■□□□□ 0.4
Ssh1-204ENSMUST00000159592 Kdm2aP59997 1161 aa17.55■□□□□ 0.4
Ssh1-204ENSMUST00000159592 Cwc22Q8C5N3 908 aaKnown RBP17.55■□□□□ 0.4
Ssh1-204ENSMUST00000159592 Armcx1Q9CX83 456 aa17.54■□□□□ 0.4
Ssh1-204ENSMUST00000159592 Supt16hQ920B9 1047 aa17.51■□□□□ 0.39
Ssh1-204ENSMUST00000159592 Plppr3Q7TPB0 716 aa17.48■□□□□ 0.39
Ssh1-204ENSMUST00000159592 Tcerg1Q8CGF7 1100 aaKnown RBP17.48■□□□□ 0.39
Ssh1-204ENSMUST00000159592 Kif15Q6P9L6 1387 aa17.47■□□□□ 0.39
Ssh1-204ENSMUST00000159592 Mia2Q91ZV0 1396 aa17.47■□□□□ 0.39
Ssh1-204ENSMUST00000159592 Ccdc88bQ4QRL3 1481 aa17.46■□□□□ 0.39
Ssh1-204ENSMUST00000159592 Mroh3A0A1D5RM54 893 aa17.43■□□□□ 0.38
Ssh1-204ENSMUST00000159592 Sin3aQ60520 1274 aaKnown RBP17.42■□□□□ 0.38
Ssh1-204ENSMUST00000159592 Ipo9Q91YE6 1041 aa17.42■□□□□ 0.38
Ssh1-204ENSMUST00000159592 Kdm5dQ62240 1548 aa17.41■□□□□ 0.38
Ssh1-204ENSMUST00000159592 Irx6Q9ER75 438 aa17.41■□□□□ 0.38
Ssh1-204ENSMUST00000159592 Dnttip2Q8R2M2 758 aaKnown RBP17.4■□□□□ 0.38
Ssh1-204ENSMUST00000159592 Ccdc18Q640L5 1455 aa17.4■□□□□ 0.38
Ssh1-204ENSMUST00000159592 Exoc6Q8R313 802 aa17.38■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Rwdd1Q9CQK7 243 aa17.38■□□□□ 0.37
Ssh1-204ENSMUST00000159592 AU015836B2RUM3 263 aa17.38■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Map7O88735 730 aa17.37■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Mtus2Q3UHD3 1353 aa17.37■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Gm20521D3Z5F7 333 aa17.36■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Nolc1E9Q5C9 702 aaKnown RBP17.36■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Srpk2O54781 681 aaKnown RBP17.36■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Dnai1Q8C0M8 701 aa17.35■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Mbd3Q9Z2D8 285 aaKnown RBP17.34■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Gm6268A2A3U9 297 aa17.34■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Chmp5Q9D7S9 219 aa17.34■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Exosc9Q9JHI7 438 aaKnown RBP17.34■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Cep162Q6ZQ06 1403 aa17.34■□□□□ 0.37
Ssh1-204ENSMUST00000159592 IqubQ8CDK3 788 aa17.33■□□□□ 0.37
Ssh1-204ENSMUST00000159592 Mapk8ip3Q9ESN9 1337 aa17.32■□□□□ 0.36
Ssh1-204ENSMUST00000159592 Erich6bQ9D4S6 220 aa17.31■□□□□ 0.36
Ssh1-204ENSMUST00000159592 Rundc1Q0VDN7 615 aa17.3■□□□□ 0.36
Ssh1-204ENSMUST00000159592 Arhgap27A2AB59 869 aa17.3■□□□□ 0.36
Ssh1-204ENSMUST00000159592 Rrp7aQ9D1C9 280 aaKnown RBP17.29■□□□□ 0.36
Ssh1-204ENSMUST00000159592 EspnQ9ET47 871 aa17.29■□□□□ 0.36
Ssh1-204ENSMUST00000159592 Cnga1P29974 684 aa17.26■□□□□ 0.35
Ssh1-204ENSMUST00000159592 Pkd2O35245 966 aa17.26■□□□□ 0.35
Ssh1-204ENSMUST00000159592 Casc1Q6TDU8 730 aa17.25■□□□□ 0.35
Ssh1-204ENSMUST00000159592 ChgaP26339 463 aaKnown RBP17.24■□□□□ 0.35
Ssh1-204ENSMUST00000159592 Baz1bQ9Z277 1479 aa17.23■□□□□ 0.35
Ssh1-204ENSMUST00000159592 Speer4f1Q9D5Q6 258 aa17.23■□□□□ 0.35
Ssh1-204ENSMUST00000159592 Stk24Q99KH8 431 aa17.22■□□□□ 0.35
Ssh1-204ENSMUST00000159592 1700019A02RikA0A087WPV9 146 aa17.22■□□□□ 0.35
Ssh1-204ENSMUST00000159592 KnstrnQ9D9Z1 312 aaKnown RBP17.22■□□□□ 0.35
Ssh1-204ENSMUST00000159592 Stag3O70576 1240 aa17.22■□□□□ 0.35
Ssh1-204ENSMUST00000159592 Tnnt2P50752 301 aa17.2■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Zscan21Q07231 555 aa17.2■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Fmn1Q05860 1466 aa17.2■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Arhgap35Q91YM2 1499 aa17.2■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Gtf3c3Q3TMP1 882 aa17.19■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Taok2Q6ZQ29 1240 aa17.19■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Fhad1A6PWD2 1420 aa17.18■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Adam1bQ8R534 806 aa17.18■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Chmp4bQ9D8B3 224 aaKnown RBP17.18■□□□□ 0.34
Ssh1-204ENSMUST00000159592 Ipo8Q7TMY7 1010 aa17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 38.7 ms