RNA–Protein interactions for RNA: ENSMUST00000113054.8

Shroom3-202, Transcript of Protein Shroom3, mousemouse

TSL 1 (best) BASIC

Gene Shroom3, Length 6,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3-202ENSMUST00000113054 NgefQ8CHT1 710 aa19.41■□□□□ 0.7
Shroom3-202ENSMUST00000113054 Rtn4Q99P72 1162 aaKnown RBP19.41■□□□□ 0.7
Shroom3-202ENSMUST00000113054 Mrs2Q5NCE8 434 aa19.4■□□□□ 0.7
Shroom3-202ENSMUST00000113054 Kdm2aP59997 1161 aa19.4■□□□□ 0.7
Shroom3-202ENSMUST00000113054 Upf2A2AT37 1269 aaKnown RBP19.39■□□□□ 0.69
Shroom3-202ENSMUST00000113054 Arid4bA2CG63 1314 aaKnown RBP19.38■□□□□ 0.69
Shroom3-202ENSMUST00000113054 Lmod3E9QA62 571 aa19.37■□□□□ 0.69
Shroom3-202ENSMUST00000113054 Calr4Q3TQS0 420 aa19.37■□□□□ 0.69
Shroom3-202ENSMUST00000113054 Grwd1Q810D6 446 aaKnown RBP19.3■□□□□ 0.68
Shroom3-202ENSMUST00000113054 Clstn2Q9ER65 966 aa19.29■□□□□ 0.68
Shroom3-202ENSMUST00000113054 Arhgap27A2AB59 869 aa19.29■□□□□ 0.68
Shroom3-202ENSMUST00000113054 Clstn1Q9EPL2 979 aa19.29■□□□□ 0.68
Shroom3-202ENSMUST00000113054 Ccer2J3QPU5 274 aa19.29■□□□□ 0.68
Shroom3-202ENSMUST00000113054 Apbb1Q9QXJ1 710 aa19.27■□□□□ 0.68
Shroom3-202ENSMUST00000113054 Znf326O88291 580 aa19.25■□□□□ 0.67
Shroom3-202ENSMUST00000113054 Abcc8B2RUS7 1588 aa19.21■□□□□ 0.67
Shroom3-202ENSMUST00000113054 Ecm2Q5FW85 670 aa19.21■□□□□ 0.67
Shroom3-202ENSMUST00000113054 IqubQ8CDK3 788 aa19.21■□□□□ 0.67
Shroom3-202ENSMUST00000113054 Stk24Q99KH8 431 aa19.19■□□□□ 0.66
Shroom3-202ENSMUST00000113054 Exosc9Q9JHI7 438 aaKnown RBP19.19■□□□□ 0.66
Shroom3-202ENSMUST00000113054 Neurod2Q62414 383 aa19.18■□□□□ 0.66
Shroom3-202ENSMUST00000113054 Srpk2O54781 681 aaKnown RBP19.17■□□□□ 0.66
Shroom3-202ENSMUST00000113054 Setd5Q5XJV7 1441 aa19.15■□□□□ 0.66
Shroom3-202ENSMUST00000113054 Gm20521D3Z5F7 333 aa19.14■□□□□ 0.65
Shroom3-202ENSMUST00000113054 1700019A02RikA0A087WPV9 146 aa19.13■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Trim30dE9PWL0 497 aa19.13■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Wdr43Q6ZQL4 677 aaKnown RBP19.12■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Mroh3A0A1D5RM54 893 aa19.12■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Cep164Q5DU05 1446 aa19.12■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Hsp90ab1P11499 724 aaKnown RBP19.11■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Aplp2Q06335 707 aa19.11■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Rrp7aQ9D1C9 280 aaKnown RBP19.11■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Cnga1P29974 684 aa19.11■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Rb1cc1Q9ESK9 1588 aa19.1■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Armcx1Q9CX83 456 aa19.08■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Gm6268A2A3U9 297 aa19.08■□□□□ 0.65
Shroom3-202ENSMUST00000113054 Kif15Q6P9L6 1387 aa19.06■□□□□ 0.64
Shroom3-202ENSMUST00000113054 Stag3O70576 1240 aa19.06■□□□□ 0.64
Shroom3-202ENSMUST00000113054 Anks4bQ8K3X6 423 aa19.05■□□□□ 0.64
Shroom3-202ENSMUST00000113054 Ppp1r18Q8BQ30 594 aa19.02■□□□□ 0.63
Shroom3-202ENSMUST00000113054 Ofd1Q80Z25 1017 aa19.01■□□□□ 0.63
Shroom3-202ENSMUST00000113054 CanxP35564 591 aaKnown RBP19.01■□□□□ 0.63
Shroom3-202ENSMUST00000113054 Card11Q8CIS0 1159 aa19■□□□□ 0.63
Shroom3-202ENSMUST00000113054 Dbr1Q923B1 550 aa18.98■□□□□ 0.63
Shroom3-202ENSMUST00000113054 Ggt6Q6PDE7 497 aa18.98■□□□□ 0.63
Shroom3-202ENSMUST00000113054 Mapk8ip3Q9ESN9 1337 aa18.98■□□□□ 0.63
Shroom3-202ENSMUST00000113054 Dcaf1Q80TR8 1506 aa18.97■□□□□ 0.63
Shroom3-202ENSMUST00000113054 Plin1Q8CGN5 517 aa18.97■□□□□ 0.63
Shroom3-202ENSMUST00000113054 PtmaP26350 111 aa18.95■□□□□ 0.62
Shroom3-202ENSMUST00000113054 Q8BT18 775 aa18.95■□□□□ 0.62
Shroom3-202ENSMUST00000113054 Trim44Q9QXA7 346 aa18.92■□□□□ 0.62
Shroom3-202ENSMUST00000113054 Aebp2Q9Z248 504 aaKnown RBP18.91■□□□□ 0.62
Shroom3-202ENSMUST00000113054 Plcb2A3KGF7 1181 aa18.9■□□□□ 0.62
Shroom3-202ENSMUST00000113054 Pes1Q9EQ61 584 aaKnown RBP18.87■□□□□ 0.61
Shroom3-202ENSMUST00000113054 Rsf1E9PWW9 1441 aaKnown RBP18.86■□□□□ 0.61
Shroom3-202ENSMUST00000113054 Stk26Q99JT2 416 aa18.85■□□□□ 0.61
Shroom3-202ENSMUST00000113054 Arid3cA6PWV5 409 aa18.84■□□□□ 0.61
Shroom3-202ENSMUST00000113054 Senp3Q9EP97 568 aaKnown RBP18.83■□□□□ 0.6
Shroom3-202ENSMUST00000113054 MlecQ6ZQI3 291 aaKnown RBP18.83■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Ercc6F8VPZ5 1481 aa18.82■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Spryd3E9Q9B3 442 aa18.81■□□□□ 0.6
Shroom3-202ENSMUST00000113054 B4galnt3Q6L8S8 986 aa18.81■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Mtus2Q3UHD3 1353 aa18.8■□□□□ 0.6
Shroom3-202ENSMUST00000113054 PnnO35691 725 aaKnown RBP18.8■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Sox12Q04890 314 aa18.79■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Ubap1lG3UW59 384 aa18.79■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Sh3bp5Q9Z131 463 aa18.78■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Hsp90b1P08113 802 aaKnown RBP18.78■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Ccdc18Q640L5 1455 aa18.78■□□□□ 0.6
Shroom3-202ENSMUST00000113054 U2surpQ6NV83 1029 aaKnown RBP18.77■□□□□ 0.6
Shroom3-202ENSMUST00000113054 Tnnt1O88346 262 aa18.76■□□□□ 0.59
Shroom3-202ENSMUST00000113054 Iqcf3Q9D498 203 aa18.75■□□□□ 0.59
Shroom3-202ENSMUST00000113054 Znf316Q6PGE4 1016 aa18.72■□□□□ 0.59
Shroom3-202ENSMUST00000113054 Eea1Q8BL66 1411 aa18.69■□□□□ 0.58
Shroom3-202ENSMUST00000113054 Slc4a3P16283 1227 aa18.68■□□□□ 0.58
Shroom3-202ENSMUST00000113054 Rassf8Q8CJ96 419 aa18.68■□□□□ 0.58
Shroom3-202ENSMUST00000113054 Fam71e1A1L3C1 212 aa18.67■□□□□ 0.58
Shroom3-202ENSMUST00000113054 AknaQ80VW7 1404 aa18.66■□□□□ 0.58
Shroom3-202ENSMUST00000113054 Rtf1A2AQ19 715 aaKnown RBP18.65■□□□□ 0.58
Shroom3-202ENSMUST00000113054 Psme1P97371 249 aa18.65■□□□□ 0.58
Shroom3-202ENSMUST00000113054 NudcO35685 332 aaKnown RBP18.64■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Wwc2Q6NXJ0 1187 aa18.64■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Birc3O08863 600 aa18.63■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Cwc22Q8C5N3 908 aaKnown RBP18.63■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Hspa5P20029 655 aaKnown RBP18.62■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Anapc15P60007 132 aa18.62■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Ifit1bl1D3Z6F0 470 aa18.61■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Casc1Q6TDU8 730 aa18.59■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Txndc2Q6P902 515 aa18.59■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Map7O88735 730 aa18.58■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Map4P27546 1125 aaKnown RBP18.58■□□□□ 0.57
Shroom3-202ENSMUST00000113054 Golga3P55937 1487 aa18.58■□□□□ 0.56
Shroom3-202ENSMUST00000113054 Znf330Q922H9 316 aa18.57■□□□□ 0.56
Shroom3-202ENSMUST00000113054 NacadQ5SWP3 1504 aa18.57■□□□□ 0.56
Shroom3-202ENSMUST00000113054 Tmco5bQ80X59 307 aa18.56■□□□□ 0.56
Shroom3-202ENSMUST00000113054 Rundc1Q0VDN7 615 aa18.56■□□□□ 0.56
Shroom3-202ENSMUST00000113054 Speer4f1Q9D5Q6 258 aa18.55■□□□□ 0.56
Shroom3-202ENSMUST00000113054 Ppm1fQ8CGA0 452 aa18.54■□□□□ 0.56
Shroom3-202ENSMUST00000113054 Pibf1E9Q6K3 756 aa18.54■□□□□ 0.56
Shroom3-202ENSMUST00000113054 Pcmtd1P59913 357 aa18.54■□□□□ 0.56
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms